Definition | Mycoplasma hyopneumoniae J chromosome, complete genome. |
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Accession | NC_007295 |
Length | 897,405 |
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The map label for this gene is 71893750
Identifier: 71893750
GI number: 71893750
Start: 485839
End: 487020
Strand: Reverse
Name: 71893750
Synonym: MHJ_0398
Alternate gene names: NA
Gene position: 487020-485839 (Counterclockwise)
Preceding gene: 71893754
Following gene: 71893749
Centisome position: 54.27
GC content: 22.84
Gene sequence:
>1182_bases ATAAACAAATCTAAAAAAGAAGACAAAATAAGGAAAAAATCCATATACATTTGGTTTAAAATAATTTGAATATTTATTTC AAAATTTAATTTTCTTTATATATTTTTTTTCTTAATAAAAATTCAAAAATTGGAGAATTATATGCTTAAAGTAAAAAAAT TTTTTCAATTTTCATTTGCGATAGGTACAATAACTTCGTTAGTTTTTGTACCTATTTTTTCATTTAATCAAAATAAAAAC TTAATTAATAATGAAAAATTAGCAACAATAAATTTTGCAAGTAAAAAATTTGTTGTTAATGATTGGAAAATTCCAACTTC CAAATCTACTGATGGAAAAAAATTATCAGACAAGGTATCTGATACAATTGAATTAAAACTATATTTAGATGTTTTTAATG AAAAAGGAAATTTAGATGAAAGAATAGATTCTCTTCTAAATAAAATAAAAAGAGGCTTTAAAAACAAAAACATAAATTGA AAAATTCAAACTAGTGCAATGCTACCTATTGTTTGATTTTACTTTAATGATGTAGAAAAATCTAAAGAATTTATCAAATA TGTTGATACATTAGATTTTGTAAAAAGAATTGTTTTTTATAAAAAAGTTATTATCAAAAATAATGATGTAGTTTCCCAAA ATGAACAGAATGGCTATTATATTTCTAGATTTTCAGACATTAATAAAAAACTACTTTTAAAAGAAATAAATTTAAATCCT GAAAAGCAAACAGAATTTTTTAAATATCACAGAAAAGGTTCAAAAATAGGAATTTTAGAAGTAGGTACAACTCAATTACA AAGAAATTATAAATTTGTACATACACCTGAAGTTAAATTATTTACTCCAGAAAATTTAAATGATACACATGGGACTAATG TATCAATGGTTGCAGCAGGTAAAAACGGAATAAATTCAAATGGACAAATTTATTTCACAAGTTTTAGTTCTAATAACTTT AATTGACAAAACGCTCTTGAATGATTGGTTTTAAAAAATAATGTAAAGTTTATTAACCATAGCTATGGACCAACTGCTGA TTACTCTCTCCCTTATGATGATGATAGTTTTTTCATAGATTATATTTCAAGAAAATATGGTGTAGTTAATGTTTTCGCTG CTGGAAATGGTCATAACAAACAAAATAAAAAAGGGAAATGACAGCACTCAATTAGCATATAA
Upstream 100 bases:
>100_bases AATAATAACACTTAAAAATTATTTATCTTATTTATTTTTTTAAATTTAATTAAATATTTTAAAAAAATGATATAATCAAA ACAAAAATTAAAAAAATAAC
Downstream 100 bases:
>100_bases CGCAATTTCTGTCGGATCAACAAAATATAGAGAAAACTCTTTTTTAAATGACATTGAAATTTCGAACTTTTCTAACAGAG AACTAGAGTCTAACCATTTA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 393; Mature: 393
Protein sequence:
>393_residues MNKSKKEDKIRKKSIYIWFKIIWIFISKFNFLYIFFFLIKIQKLENYMLKVKKFFQFSFAIGTITSLVFVPIFSFNQNKN LINNEKLATINFASKKFVVNDWKIPTSKSTDGKKLSDKVSDTIELKLYLDVFNEKGNLDERIDSLLNKIKRGFKNKNINW KIQTSAMLPIVWFYFNDVEKSKEFIKYVDTLDFVKRIVFYKKVIIKNNDVVSQNEQNGYYISRFSDINKKLLLKEINLNP EKQTEFFKYHRKGSKIGILEVGTTQLQRNYKFVHTPEVKLFTPENLNDTHGTNVSMVAAGKNGINSNGQIYFTSFSSNNF NWQNALEWLVLKNNVKFINHSYGPTADYSLPYDDDSFFIDYISRKYGVVNVFAAGNGHNKQNKKGKWQHSISI
Sequences:
>Translated_393_residues MNKSKKEDKIRKKSIYIWFKII*IFISKFNFLYIFFFLIKIQKLENYMLKVKKFFQFSFAIGTITSLVFVPIFSFNQNKN LINNEKLATINFASKKFVVNDWKIPTSKSTDGKKLSDKVSDTIELKLYLDVFNEKGNLDERIDSLLNKIKRGFKNKNIN* KIQTSAMLPIV*FYFNDVEKSKEFIKYVDTLDFVKRIVFYKKVIIKNNDVVSQNEQNGYYISRFSDINKKLLLKEINLNP EKQTEFFKYHRKGSKIGILEVGTTQLQRNYKFVHTPEVKLFTPENLNDTHGTNVSMVAAGKNGINSNGQIYFTSFSSNNF N*QNALE*LVLKNNVKFINHSYGPTADYSLPYDDDSFFIDYISRKYGVVNVFAAGNGHNKQNKKGK*QHSISI >Mature_393_residues MNKSKKEDKIRKKSIYIWFKII*IFISKFNFLYIFFFLIKIQKLENYMLKVKKFFQFSFAIGTITSLVFVPIFSFNQNKN LINNEKLATINFASKKFVVNDWKIPTSKSTDGKKLSDKVSDTIELKLYLDVFNEKGNLDERIDSLLNKIKRGFKNKNIN* KIQTSAMLPIV*FYFNDVEKSKEFIKYVDTLDFVKRIVFYKKVIIKNNDVVSQNEQNGYYISRFSDINKKLLLKEINLNP EKQTEFFKYHRKGSKIGILEVGTTQLQRNYKFVHTPEVKLFTPENLNDTHGTNVSMVAAGKNGINSNGQIYFTSFSSNNF N*QNALE*LVLKNNVKFINHSYGPTADYSLPYDDDSFFIDYISRKYGVVNVFAAGNGHNKQNKKGK*QHSISI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 44957; Mature: 44957
Theoretical pI: Translated: 10.36; Mature: 10.36
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 1.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNKSKKEDKIRKKSIYIWFKIIIFISKFNFLYIFFFLIKIQKLENYMLKVKKFFQFSFAI CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GTITSLVFVPIFSFNQNKNLINNEKLATINFASKKFVVNDWKIPTSKSTDGKKLSDKVSD HHHHHHHHHHHEECCCCCCCCCCCCEEEEEECCCEEEEECCCCCCCCCCCCCHHHHHCCC TIELKLYLDVFNEKGNLDERIDSLLNKIKRGFKNKNINKIQTSAMLPIVFYFNDVEKSKE EEEEEEEEEEECCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHCCEEEEEECCHHHHHH FIKYVDTLDFVKRIVFYKKVIIKNNDVVSQNEQNGYYISRFSDINKKLLLKEINLNPEKQ HHHHHHHHHHHHHHHHHHHHEEECCCEECCCCCCCEEEEEECCCCHHEEHEECCCCCCHH TEFFKYHRKGSKIGILEVGTTQLQRNYKFVHTPEVKLFTPENLNDTHGTNVSMVAAGKNG HHHHHHHCCCCEEEEEECCHHHHHCCCEEEECCCEEEECCCCCCCCCCCCEEEEEECCCC INSNGQIYFTSFSSNNFNQNALELVLKNNVKFINHSYGPTADYSLPYDDDSFFIDYISRK CCCCCEEEEEEECCCCCCHHHHHHHHHCCEEEEECCCCCCCCCCCCCCCCCHHHHHHHCC YGVVNVFAAGNGHNKQNKKGKQHSISI CCEEEEEEECCCCCCCCCCCCCCCCCC >Mature Secondary Structure MNKSKKEDKIRKKSIYIWFKIIIFISKFNFLYIFFFLIKIQKLENYMLKVKKFFQFSFAI CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GTITSLVFVPIFSFNQNKNLINNEKLATINFASKKFVVNDWKIPTSKSTDGKKLSDKVSD HHHHHHHHHHHEECCCCCCCCCCCCEEEEEECCCEEEEECCCCCCCCCCCCCHHHHHCCC TIELKLYLDVFNEKGNLDERIDSLLNKIKRGFKNKNINKIQTSAMLPIVFYFNDVEKSKE EEEEEEEEEEECCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHCCEEEEEECCHHHHHH FIKYVDTLDFVKRIVFYKKVIIKNNDVVSQNEQNGYYISRFSDINKKLLLKEINLNPEKQ HHHHHHHHHHHHHHHHHHHHEEECCCEECCCCCCCEEEEEECCCCHHEEHEECCCCCCHH TEFFKYHRKGSKIGILEVGTTQLQRNYKFVHTPEVKLFTPENLNDTHGTNVSMVAAGKNG HHHHHHHCCCCEEEEEECCHHHHHCCCEEEECCCEEEECCCCCCCCCCCCEEEEEECCCC INSNGQIYFTSFSSNNFNQNALELVLKNNVKFINHSYGPTADYSLPYDDDSFFIDYISRK CCCCCEEEEEEECCCCCCHHHHHHHHHCCEEEEECCCCCCCCCCCCCCCCCHHHHHHHCC YGVVNVFAAGNGHNKQNKKGKQHSISI CCEEEEEEECCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA