Definition | Mycoplasma hyopneumoniae J chromosome, complete genome. |
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Accession | NC_007295 |
Length | 897,405 |
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The map label for this gene is 71893746
Identifier: 71893746
GI number: 71893746
Start: 482355
End: 483161
Strand: Reverse
Name: 71893746
Synonym: MHJ_0394
Alternate gene names: NA
Gene position: 483161-482355 (Counterclockwise)
Preceding gene: 71893747
Following gene: 71893745
Centisome position: 53.84
GC content: 20.69
Gene sequence:
>807_bases ATTAGCCAAGAAAAAAGAACTAAAATAACAAAACCTATCAAAATCTCACTGTTAGTTTTATGATCTTATTTGATAATATT TACAATTTCGATGAGTAGTGTAGCTTTATTCTTGTGAAATCGTATTCCGCAAGAGCAAAAATATAAAATAGATTTAAATT TATTAAAAACCAAAACTTATCAACAATCATTTTTAAAAAATTATTTTAATAATTTCTTTCTTAAAAAAAGCGAAGACAAC TTTGCAGAATATCAAAAAAAATATTTTATGAATTCATATTGAATTTTTAAAGACACTTTAAAAAGTAGTGATAAATTAAA TTCAAATGTAAAAGAATTTGTTGCTGATTCAACTATAAACAACAATTCAATAAAAGAAAATGAACAAAAATTTGATAATT TTTTTGCTCAGAATAAATTTAAAACTTTTACATTAACAAATGTAAATAAATTTAATAAACTAGATTCTAATGTCTTAAAG CCAGTATTAGAAAAATATATAAATAAATTCTTTGAAAATCAAAGCATTGAAAATATATTGTCAAAATATAATTTATATTT AGCAGTAGAAAAACTTAATTTAAGCTTTTTTAACCTTTATTCTTCTAATATGGGTCAGTGATATTTAGATTTTGAAAAAT CTAAAAAATTATATTTTGTAAATAGCAATAGCAATAATTTAATTCCTAGAATCGAAAATAACAAAGGAGCTCAAATCAGT GTTATTGCCATTAAAAAAGAAGAGCAAATTACATTATTTCAAGAAACTGATATAGAAAAAGTAATGAAAGATTTAGGGAA AATATAA
Upstream 100 bases:
>100_bases ATAATGAAACAGATTGAAAAACTCTTTTACAAGAATGGAAGGGGCTACCTTGAGACAAAAAAACAAATGAAAATTAAAGT TTTCTTGATTTGCTAATGAT
Downstream 100 bases:
>100_bases AAAAATTATTTAATTTTTAAAAGTATTATTAAGTATTTACAACTGATTAAATACAACTGCAAATCGTAAGTTTTAATAAA AAAAATCCTTCAAAAATGAG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 268; Mature: 267
Protein sequence:
>268_residues MSQEKRTKITKPIKISLLVLWSYLIIFTISMSSVALFLWNRIPQEQKYKIDLNLLKTKTYQQSFLKNYFNNFFLKKSEDN FAEYQKKYFMNSYWIFKDTLKSSDKLNSNVKEFVADSTINNNSIKENEQKFDNFFAQNKFKTFTLTNVNKFNKLDSNVLK PVLEKYINKFFENQSIENILSKYNLYLAVEKLNLSFFNLYSSNMGQWYLDFEKSKKLYFVNSNSNNLIPRIENNKGAQIS VIAIKKEEQITLFQETDIEKVMKDLGKI
Sequences:
>Translated_268_residues MSQEKRTKITKPIKISLLVL*SYLIIFTISMSSVALFL*NRIPQEQKYKIDLNLLKTKTYQQSFLKNYFNNFFLKKSEDN FAEYQKKYFMNSY*IFKDTLKSSDKLNSNVKEFVADSTINNNSIKENEQKFDNFFAQNKFKTFTLTNVNKFNKLDSNVLK PVLEKYINKFFENQSIENILSKYNLYLAVEKLNLSFFNLYSSNMGQ*YLDFEKSKKLYFVNSNSNNLIPRIENNKGAQIS VIAIKKEEQITLFQETDIEKVMKDLGKI >Mature_267_residues SQEKRTKITKPIKISLLVL*SYLIIFTISMSSVALFL*NRIPQEQKYKIDLNLLKTKTYQQSFLKNYFNNFFLKKSEDNF AEYQKKYFMNSY*IFKDTLKSSDKLNSNVKEFVADSTINNNSIKENEQKFDNFFAQNKFKTFTLTNVNKFNKLDSNVLKP VLEKYINKFFENQSIENILSKYNLYLAVEKLNLSFFNLYSSNMGQ*YLDFEKSKKLYFVNSNSNNLIPRIENNKGAQISV IAIKKEEQITLFQETDIEKVMKDLGKI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 31091; Mature: 30960
Theoretical pI: Translated: 10.07; Mature: 10.07
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSQEKRTKITKPIKISLLVLSYLIIFTISMSSVALFLNRIPQEQKYKIDLNLLKTKTYQQ CCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEHHHHHHHHH SFLKNYFNNFFLKKSEDNFAEYQKKYFMNSYIFKDTLKSSDKLNSNVKEFVADSTINNNS HHHHHHHHHHEEECCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCC IKENEQKFDNFFAQNKFKTFTLTNVNKFNKLDSNVLKPVLEKYINKFFENQSIENILSKY CHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH NLYLAVEKLNLSFFNLYSSNMGQYLDFEKSKKLYFVNSNSNNLIPRIENNKGAQISVIAI HEEEEEEECCCHHHHHHHHCCCCCCCCCCCCEEEEEECCCCCCCCEEECCCCCEEEEEEE KKEEQITLFQETDIEKVMKDLGKI ECCCEEEEEHHCCHHHHHHHHCCC >Mature Secondary Structure SQEKRTKITKPIKISLLVLSYLIIFTISMSSVALFLNRIPQEQKYKIDLNLLKTKTYQQ CCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEHHHHHHHHH SFLKNYFNNFFLKKSEDNFAEYQKKYFMNSYIFKDTLKSSDKLNSNVKEFVADSTINNNS HHHHHHHHHHEEECCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCC IKENEQKFDNFFAQNKFKTFTLTNVNKFNKLDSNVLKPVLEKYINKFFENQSIENILSKY CHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH NLYLAVEKLNLSFFNLYSSNMGQYLDFEKSKKLYFVNSNSNNLIPRIENNKGAQISVIAI HEEEEEEECCCHHHHHHHHCCCCCCCCCCCCEEEEEECCCCCCCCEEECCCCCEEEEEEE KKEEQITLFQETDIEKVMKDLGKI ECCCEEEEEHHCCHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA