Definition | Mycoplasma hyopneumoniae J chromosome, complete genome. |
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Accession | NC_007295 |
Length | 897,405 |
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The map label for this gene is 71893683
Identifier: 71893683
GI number: 71893683
Start: 396657
End: 398315
Strand: Reverse
Name: 71893683
Synonym: MHJ_0329
Alternate gene names: NA
Gene position: 398315-396657 (Counterclockwise)
Preceding gene: 71893684
Following gene: 71893681
Centisome position: 44.39
GC content: 26.4
Gene sequence:
>1659_bases ATGAAAAAGCATAATTTGATTTTGTTTAATGTTTGAGGATCTTCAAAAGATAAAATATATAAATATGTTGGCTGAACACA AGGTTATGGGAAAGCTCCAAAACGTTGATTTAGTATAGGAAATGTGCAAACTTTGGAAAAAATTAATCCAAATGCTATTC AAATTATCAAAGAAAAATTGAAATTATTTTCAAATTTAGATGACAAAGATAAAATCAAGACTACTTTACTTGATTCTCTT AAAAATTCTGCCATAATCGAAGGTTCGGTTTTTATTGGTGGGGAATTAATTGAAAAACTTATTGAAAAGCACAATATTTT TGAATCACTTCCTAAAAGTAGGCATAAAAATATGAAACAAATTTTTAACTACTTAATTTCAAAGCGAATTACTGATCCTG GTAGCATTATTAATGCTTTTGATAAAAAGGATGATTACTCAAATCAAATAAATACTTCCAAAAATAGCTTTTATAGACTC TTAGATCTTGTCTATGAATCACAAAATCAACTTTTAGATAGTCTTAACAAAATGGTTATAAGCGAGCTTGGAAAAAGGGA CAATGAATTTTATTTTGATTCATCAACAGTCTATTTTGAGACATTTGAAAGAAATGGATTAAGAATTCCTGGCTATTCTA AAGATGCTAAATTCAAAGAAGATCAAATTGTCATTGCTTTAGCATGTGATAAAAATGGCATTCCTTTTCATATTAAAGTT TTTAAAGGAAATACAGCCGATTCTAGTACCCTAATCCCTTTTGTATTAGATATTGAATCTAAATATAATATCAAAAATAT GACAATAATTGCTGACCGTGGCATGTCCACTGCTGCAAATATTCGATTTCTTGAATCAAAAGAATATAATTTCATTATTT CTTATCGTGCAAAGATAGGCAGTCAAAAATTTAAAAATTATTTATTAGATCCTAGCGATTATGTTGATCTAAATACAGAT TTTAAGTATAAAAAAGAAGAATTTTATTCATCTTATAAAAATAAAAGATACACTGAAAATATTAGAAGAAGAATTATTAC TTACAGTAAAAAAAGAGCAATAAAAGACAGCAAGGCTCGCGAAGAGCAAATCCAAAGTTTTATTAAAAAACAAAATAAAG ATGGTTTTATTGAAGTAAACAAATTGTTTGGTAAAAAACCTAAATATTTTAGGGAAATTTCAAACATGAAATTTGAATTA GATCAAAGTAAAATTGACAAGGACAAACAATTTGATGGTTACTATGTCTATGAAACAAATATACTAAATTTAAATGTCTT AGACATAGTTGAAAAATACCAAAAACAGTGAAATATTGAAGCTAATTTTAGAAGTCTAAAAGGTTTATTGAATATTCGTC CTGTATTTTTAAGAATAGATGAGCATATCCTAGCTCATACATTTTTGTGCTTTATCTCATTAGTTATTTTAAAAACTATA ATTTTTAAAATCAACAAACATATTAGTGATAACAAGTTATTTGCAAACAGTCAATTAACTGAAGTTGGTTTAGTAACGAT GTTGCAAAAATTAAGACAAAGGGTTGAATTTAACACTTTAGATCAACAAATGATATTTAAAAATCGCGATGGTGTTCCTA GCGATCCCAATATTTGAAATAGGTATGATTTCTACTTTGATATCTTAATAAATCAGTAA
Upstream 100 bases:
>100_bases AAATCCCCGTAAATCGGTGTTTTTTGCCCGTAAAACCTTAATTTTTATTAATTACAATTAATTACAATTTTAAAGTAATT TTATGGTATAATTATAAATT
Downstream 100 bases:
>100_bases AAAAATAGGTAATTAACTTTTGGCAAAAAACTTAAAAAAGCGCGGGAAACCGGACACTTTTTTAAAATTATCTCATCAAA CTGGGAAACTCGGGACTTTT
Product: putative transposase
Products: NA
Alternate protein names: Transposase; Transposase IS4 Family; Transposase Undefined; Transposase Is4 Family Protein; Transposase For Insertion Sequence Element; TnpB Family Transposase; Transposase-Like Protein; ISMbov3 Transposase; ISMHp1 Transposase; Transposase Family Protein; ISMsm6 Transposase
Number of amino acids: Translated: 552; Mature: 552
Protein sequence:
>552_residues MKKHNLILFNVWGSSKDKIYKYVGWTQGYGKAPKRWFSIGNVQTLEKINPNAIQIIKEKLKLFSNLDDKDKIKTTLLDSL KNSAIIEGSVFIGGELIEKLIEKHNIFESLPKSRHKNMKQIFNYLISKRITDPGSIINAFDKKDDYSNQINTSKNSFYRL LDLVYESQNQLLDSLNKMVISELGKRDNEFYFDSSTVYFETFERNGLRIPGYSKDAKFKEDQIVIALACDKNGIPFHIKV FKGNTADSSTLIPFVLDIESKYNIKNMTIIADRGMSTAANIRFLESKEYNFIISYRAKIGSQKFKNYLLDPSDYVDLNTD FKYKKEEFYSSYKNKRYTENIRRRIITYSKKRAIKDSKAREEQIQSFIKKQNKDGFIEVNKLFGKKPKYFREISNMKFEL DQSKIDKDKQFDGYYVYETNILNLNVLDIVEKYQKQWNIEANFRSLKGLLNIRPVFLRIDEHILAHTFLCFISLVILKTI IFKINKHISDNKLFANSQLTEVGLVTMLQKLRQRVEFNTLDQQMIFKNRDGVPSDPNIWNRYDFYFDILINQ
Sequences:
>Translated_552_residues MKKHNLILFNV*GSSKDKIYKYVG*TQGYGKAPKR*FSIGNVQTLEKINPNAIQIIKEKLKLFSNLDDKDKIKTTLLDSL KNSAIIEGSVFIGGELIEKLIEKHNIFESLPKSRHKNMKQIFNYLISKRITDPGSIINAFDKKDDYSNQINTSKNSFYRL LDLVYESQNQLLDSLNKMVISELGKRDNEFYFDSSTVYFETFERNGLRIPGYSKDAKFKEDQIVIALACDKNGIPFHIKV FKGNTADSSTLIPFVLDIESKYNIKNMTIIADRGMSTAANIRFLESKEYNFIISYRAKIGSQKFKNYLLDPSDYVDLNTD FKYKKEEFYSSYKNKRYTENIRRRIITYSKKRAIKDSKAREEQIQSFIKKQNKDGFIEVNKLFGKKPKYFREISNMKFEL DQSKIDKDKQFDGYYVYETNILNLNVLDIVEKYQKQ*NIEANFRSLKGLLNIRPVFLRIDEHILAHTFLCFISLVILKTI IFKINKHISDNKLFANSQLTEVGLVTMLQKLRQRVEFNTLDQQMIFKNRDGVPSDPNI*NRYDFYFDILINQ >Mature_552_residues MKKHNLILFNV*GSSKDKIYKYVG*TQGYGKAPKR*FSIGNVQTLEKINPNAIQIIKEKLKLFSNLDDKDKIKTTLLDSL KNSAIIEGSVFIGGELIEKLIEKHNIFESLPKSRHKNMKQIFNYLISKRITDPGSIINAFDKKDDYSNQINTSKNSFYRL LDLVYESQNQLLDSLNKMVISELGKRDNEFYFDSSTVYFETFERNGLRIPGYSKDAKFKEDQIVIALACDKNGIPFHIKV FKGNTADSSTLIPFVLDIESKYNIKNMTIIADRGMSTAANIRFLESKEYNFIISYRAKIGSQKFKNYLLDPSDYVDLNTD FKYKKEEFYSSYKNKRYTENIRRRIITYSKKRAIKDSKAREEQIQSFIKKQNKDGFIEVNKLFGKKPKYFREISNMKFEL DQSKIDKDKQFDGYYVYETNILNLNVLDIVEKYQKQ*NIEANFRSLKGLLNIRPVFLRIDEHILAHTFLCFISLVILKTI IFKINKHISDNKLFANSQLTEVGLVTMLQKLRQRVEFNTLDQQMIFKNRDGVPSDPNI*NRYDFYFDILINQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 63955; Mature: 63955
Theoretical pI: Translated: 10.00; Mature: 10.00
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKHNLILFNVGSSKDKIYKYVGTQGYGKAPKRFSIGNVQTLEKINPNAIQIIKEKLKLF CCCCCEEEEECCCCHHHHHHHHCCCCCCCCCCEECCCCCHHHHHCCCHHHHHHHHHHHHH SNLDDKDKIKTTLLDSLKNSAIIEGSVFIGGELIEKLIEKHNIFESLPKSRHKNMKQIFN HCCCCHHHHHHHHHHHHCCCEEEECEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH YLISKRITDPGSIINAFDKKDDYSNQINTSKNSFYRLLDLVYESQNQLLDSLNKMVISEL HHHHHCCCCCHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GKRDNEFYFDSSTVYFETFERNGLRIPGYSKDAKFKEDQIVIALACDKNGIPFHIKVFKG CCCCCCEEECCCEEEEEEECCCCEECCCCCCCCCCCCCCEEEEEEECCCCCCEEEEEEEC NTADSSTLIPFVLDIESKYNIKNMTIIADRGMSTAANIRFLESKEYNFIISYRAKIGSQK CCCCCCCEEEEEEEECCCCCCCEEEEEECCCCCCHHCEEEEECCCCEEEEEEHHHHCHHH FKNYLLDPSDYVDLNTDFKYKKEEFYSSYKNKRYTENIRRRIITYSKKRAIKDSKAREEQ HHHHCCCCCCCEECCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH IQSFIKKQNKDGFIEVNKLFGKKPKYFREISNMKFELDQSKIDKDKQFDGYYVYETNILN HHHHHHHCCCCCCEEEHHHCCCCCHHHHHHHCCEEEECHHHCCCCCCCCCEEEEEEEEEE LNVLDIVEKYQKQNIEANFRSLKGLLNIRPVFLRIDEHILAHTFLCFISLVILKTIIFKI EHHHHHHHHHHHCCCCHHHHHHHHHHCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHH NKHISDNKLFANSQLTEVGLVTMLQKLRQRVEFNTLDQQMIFKNRDGVPSDPNINRYDFY HCCCCCCEEECCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHCCCCCCCCCCCCEEEEE FDILINQ EEEEECC >Mature Secondary Structure MKKHNLILFNVGSSKDKIYKYVGTQGYGKAPKRFSIGNVQTLEKINPNAIQIIKEKLKLF CCCCCEEEEECCCCHHHHHHHHCCCCCCCCCCEECCCCCHHHHHCCCHHHHHHHHHHHHH SNLDDKDKIKTTLLDSLKNSAIIEGSVFIGGELIEKLIEKHNIFESLPKSRHKNMKQIFN HCCCCHHHHHHHHHHHHCCCEEEECEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH YLISKRITDPGSIINAFDKKDDYSNQINTSKNSFYRLLDLVYESQNQLLDSLNKMVISEL HHHHHCCCCCHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GKRDNEFYFDSSTVYFETFERNGLRIPGYSKDAKFKEDQIVIALACDKNGIPFHIKVFKG CCCCCCEEECCCEEEEEEECCCCEECCCCCCCCCCCCCCEEEEEEECCCCCCEEEEEEEC NTADSSTLIPFVLDIESKYNIKNMTIIADRGMSTAANIRFLESKEYNFIISYRAKIGSQK CCCCCCCEEEEEEEECCCCCCCEEEEEECCCCCCHHCEEEEECCCCEEEEEEHHHHCHHH FKNYLLDPSDYVDLNTDFKYKKEEFYSSYKNKRYTENIRRRIITYSKKRAIKDSKAREEQ HHHHCCCCCCCEECCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH IQSFIKKQNKDGFIEVNKLFGKKPKYFREISNMKFELDQSKIDKDKQFDGYYVYETNILN HHHHHHHCCCCCCEEEHHHCCCCCHHHHHHHCCEEEECHHHCCCCCCCCCEEEEEEEEEE LNVLDIVEKYQKQNIEANFRSLKGLLNIRPVFLRIDEHILAHTFLCFISLVILKTIIFKI EHHHHHHHHHHHCCCCHHHHHHHHHHCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHH NKHISDNKLFANSQLTEVGLVTMLQKLRQRVEFNTLDQQMIFKNRDGVPSDPNINRYDFY HCCCCCCEEECCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHCCCCCCCCCCCCEEEEE FDILINQ EEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA