Definition | Mycoplasma hyopneumoniae J chromosome, complete genome. |
---|---|
Accession | NC_007295 |
Length | 897,405 |
Click here to switch to the map view.
The map label for this gene is 71893659
Identifier: 71893659
GI number: 71893659
Start: 366436
End: 366768
Strand: Reverse
Name: 71893659
Synonym: MHJ_0304
Alternate gene names: NA
Gene position: 366768-366436 (Counterclockwise)
Preceding gene: 71893664
Following gene: 71893658
Centisome position: 40.87
GC content: 26.13
Gene sequence:
>333_bases ATGAAAAAAATTGCTAATTTCTTGATAATTGAACAAAAAAATGAAATTTTTACTATTTATTTAACGGCCGAATTACAAGA TGATCTTGGAACAATCGGATTTTTAAAATTTACCAATAAAAAACGACTAGAAAAAGATGATGTTGTCGCTAAAATTGAAG CGTCAAAAACTGTTTTTTCAATAAAAACACCCTTAAAATGTAGAATTATTGAACTAAATCAATTAGCTGAAAAGGATCCA AAAATTTTGAATTCACATGATTCAGACAAAAATTGACTTTTTAAAGCAAAAGATATAGACCAAAGTGAATTTGATGAACT TGAGGACTTTTAG
Upstream 100 bases:
>100_bases CTGATTTATCTATATTTATAATTTATAGATTTTTTGCCATTAGTTGCTTTTTTGTGGTAACATCATTTTAGATATTAACA AAAAATTTAAGAGGATTGCT
Downstream 100 bases:
>100_bases TATTCTAGATCAAGCGATAAAAATCAAGAAAATCCTTGATTCAGCTGATGCAATTGTTGTTGGAGTTGGTTCAGGACTAA CAAGTGCAGATGGAAATAAT
Product: putative glycine cleavage system H protein
Products: NA
Alternate protein names: GcvH Family Protein
Number of amino acids: Translated: 110; Mature: 110
Protein sequence:
>110_residues MKKIANFLIIEQKNEIFTIYLTAELQDDLGTIGFLKFTNKKRLEKDDVVAKIEASKTVFSIKTPLKCRIIELNQLAEKDP KILNSHDSDKNWLFKAKDIDQSEFDELEDF
Sequences:
>Translated_110_residues MKKIANFLIIEQKNEIFTIYLTAELQDDLGTIGFLKFTNKKRLEKDDVVAKIEASKTVFSIKTPLKCRIIELNQLAEKDP KILNSHDSDKN*LFKAKDIDQSEFDELEDF >Mature_110_residues MKKIANFLIIEQKNEIFTIYLTAELQDDLGTIGFLKFTNKKRLEKDDVVAKIEASKTVFSIKTPLKCRIIELNQLAEKDP KILNSHDSDKN*LFKAKDIDQSEFDELEDF
Specific function: Unknown
COG id: COG0509
COG function: function code E; Glycine cleavage system H protein (lipoate-binding)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12620; Mature: 12620
Theoretical pI: Translated: 4.98; Mature: 4.98
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKIANFLIIEQKNEIFTIYLTAELQDDLGTIGFLKFTNKKRLEKDDVVAKIEASKTVFS CCCCCCEEEEECCCCEEEEEEEEEECCCCCCEEEEEECCCCCCCCCCEEEEEECCCEEEE IKTPLKCRIIELNQLAEKDPKILNSHDSDKNLFKAKDIDQSEFDELEDF ECCCCEEEEEECHHHCCCCCCCCCCCCCCCCEEECCCCCHHHHHHHCCC >Mature Secondary Structure MKKIANFLIIEQKNEIFTIYLTAELQDDLGTIGFLKFTNKKRLEKDDVVAKIEASKTVFS CCCCCCEEEEECCCCEEEEEEEEEECCCCCCEEEEEECCCCCCCCCCEEEEEECCCEEEE IKTPLKCRIIELNQLAEKDPKILNSHDSDKNLFKAKDIDQSEFDELEDF ECCCCEEEEEECHHHCCCCCCCCCCCCCCCCEEECCCCCHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA