Definition | Mycoplasma hyopneumoniae J chromosome, complete genome. |
---|---|
Accession | NC_007295 |
Length | 897,405 |
Click here to switch to the map view.
The map label for this gene is 71893658
Identifier: 71893658
GI number: 71893658
Start: 365592
End: 366434
Strand: Reverse
Name: 71893658
Synonym: MHJ_0303
Alternate gene names: NA
Gene position: 366434-365592 (Counterclockwise)
Preceding gene: 71893659
Following gene: 71893657
Centisome position: 40.83
GC content: 25.03
Gene sequence:
>843_bases ATTCTAGATCAAGCGATAAAAATCAAGAAAATCCTTGATTCAGCTGATGCAATTGTTGTTGGAGTTGGTTCAGGACTAAC AAGTGCAGATGGAAATAATTATTATGGATCAAAATTTAGTGATAATTTTAAAGATTTTATCGAAAAATATCATTTTTTAG ATATGCTTCAAGCTTCGCTTTATGATTTTGGATCATGAGAAACATACTGAGCTTTTCATAGTAGATTTGCGAAAGTTAAT TTTTTAGATCTTAAAGAATCAGAAAGTTTTTTGAATTTAAGAAAAATTTTAGAAAATAAAAATTTTTTTATAATAACCAC AAATTCTGATAGTTTTTTCGAAAAATCAGGATTTGACAATGAAAAAATTTTTTACATCCAGGGCAAATATAATTTAATGC AGTGCTCAAAAATGTGTAAAAATTTTTTATACCAAGATGATGAATTAATTCTAAAAATGGTAGAAAATCAAAAAAATATG AAGGTTGATTATAATTTATTGCCAAAATGCCCAAAATGTAATGCCTTTTTAGAAATAAACAAAAGAATTTCGTTTAAAGG AATGGTTGAAGATCAAAACTTCAATAACCAAAAAGCAAATTACAATAATTTTATTGAACAAAATAAAGATAAAAAATTAG TTTTTCTTGAAATAGGGGTCGGTTTTACAACCCCGCAATTAATTAAATTGCCATTTCAAGAGATGACAAAAAAATTCAAA AATGCAAAATATCTAGTTATAAATCAGAAAAAATACCGTACTAACAAGGATATTCTTGAAAAATCCTATTTTTTTCATGA GGATATTAAATTACTTCTACAAAAAATAACAGAACAGGAATAA
Upstream 100 bases:
>100_bases GATCCAAAAATTTTGAATTCACATGATTCAGACAAAAATTGACTTTTTAAAGCAAAAGATATAGACCAAAGTGAATTTGA TGAACTTGAGGACTTTTAGT
Downstream 100 bases:
>100_bases AAATGTACTTAATCGAACCAAAACGCAATGGAAAATGAGTTTTTGACGGAGCAATTTTGCTTGCAATTCAATATTGAGCA ATCAAAAACTTAAAACTAGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 280; Mature: 280
Protein sequence:
>280_residues MLDQAIKIKKILDSADAIVVGVGSGLTSADGNNYYGSKFSDNFKDFIEKYHFLDMLQASLYDFGSWETYWAFHSRFAKVN FLDLKESESFLNLRKILENKNFFIITTNSDSFFEKSGFDNEKIFYIQGKYNLMQCSKMCKNFLYQDDELILKMVENQKNM KVDYNLLPKCPKCNAFLEINKRISFKGMVEDQNFNNQKANYNNFIEQNKDKKLVFLEIGVGFTTPQLIKLPFQEMTKKFK NAKYLVINQKKYRTNKDILEKSYFFHEDIKLLLQKITEQE
Sequences:
>Translated_280_residues MLDQAIKIKKILDSADAIVVGVGSGLTSADGNNYYGSKFSDNFKDFIEKYHFLDMLQASLYDFGS*ETY*AFHSRFAKVN FLDLKESESFLNLRKILENKNFFIITTNSDSFFEKSGFDNEKIFYIQGKYNLMQCSKMCKNFLYQDDELILKMVENQKNM KVDYNLLPKCPKCNAFLEINKRISFKGMVEDQNFNNQKANYNNFIEQNKDKKLVFLEIGVGFTTPQLIKLPFQEMTKKFK NAKYLVINQKKYRTNKDILEKSYFFHEDIKLLLQKITEQE >Mature_280_residues MLDQAIKIKKILDSADAIVVGVGSGLTSADGNNYYGSKFSDNFKDFIEKYHFLDMLQASLYDFGS*ETY*AFHSRFAKVN FLDLKESESFLNLRKILENKNFFIITTNSDSFFEKSGFDNEKIFYIQGKYNLMQCSKMCKNFLYQDDELILKMVENQKNM KVDYNLLPKCPKCNAFLEINKRISFKGMVEDQNFNNQKANYNNFIEQNKDKKLVFLEIGVGFTTPQLIKLPFQEMTKKFK NAKYLVINQKKYRTNKDILEKSYFFHEDIKLLLQKITEQE
Specific function: Unknown
COG id: COG0846
COG function: function code K; NAD-dependent protein deacetylases, SIR2 family
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 32667; Mature: 32667
Theoretical pI: Translated: 8.95; Mature: 8.95
Prosite motif: PS50305 SIRTUIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLDQAIKIKKILDSADAIVVGVGSGLTSADGNNYYGSKFSDNFKDFIEKYHFLDMLQASL CCCHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH YDFGSETYAFHSRFAKVNFLDLKESESFLNLRKILENKNFFIITTNSDSFFEKSGFDNEK HHCCCHHHHHHHHHHEEEEEECCCCHHHHHHHHHHCCCCEEEEECCCCCHHHHCCCCCCE IFYIQGKYNLMQCSKMCKNFLYQDDELILKMVENQKNMKVDYNLLPKCPKCNAFLEINKR EEEEECCCCHHHHHHHHHHHCCCCHHHHHHHHHCCCCCEECCCCCCCCCCCCEEEEECCE ISFKGMVEDQNFNNQKANYNNFIEQNKDKKLVFLEIGVGFTTPQLIKLPFQEMTKKFKNA EEEEEEEECCCCCCCCCCHHHHHHCCCCCEEEEEEECCCCCCHHHHCCCHHHHHHHHCCC KYLVINQKKYRTNKDILEKSYFFHEDIKLLLQKITEQE EEEEEECHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MLDQAIKIKKILDSADAIVVGVGSGLTSADGNNYYGSKFSDNFKDFIEKYHFLDMLQASL CCCHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH YDFGSETYAFHSRFAKVNFLDLKESESFLNLRKILENKNFFIITTNSDSFFEKSGFDNEK HHCCCHHHHHHHHHHEEEEEECCCCHHHHHHHHHHCCCCEEEEECCCCCHHHHCCCCCCE IFYIQGKYNLMQCSKMCKNFLYQDDELILKMVENQKNMKVDYNLLPKCPKCNAFLEINKR EEEEECCCCHHHHHHHHHHHCCCCHHHHHHHHHCCCCCEECCCCCCCCCCCCEEEEECCE ISFKGMVEDQNFNNQKANYNNFIEQNKDKKLVFLEIGVGFTTPQLIKLPFQEMTKKFKNA EEEEEEEECCCCCCCCCCHHHHHHCCCCCEEEEEEECCCCCCHHHHCCCHHHHHHHHCCC KYLVINQKKYRTNKDILEKSYFFHEDIKLLLQKITEQE EEEEEECHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA