Definition | Mycoplasma hyopneumoniae J chromosome, complete genome. |
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Accession | NC_007295 |
Length | 897,405 |
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The map label for this gene is 71893645
Identifier: 71893645
GI number: 71893645
Start: 343902
End: 344666
Strand: Reverse
Name: 71893645
Synonym: MHJ_0289
Alternate gene names: NA
Gene position: 344666-343902 (Counterclockwise)
Preceding gene: 71893652
Following gene: 71893644
Centisome position: 38.41
GC content: 27.97
Gene sequence:
>765_bases TTATTATTTACTTCAATCGCACCACTACAACAAAAACAAATTGCTCCAGAAATCAAGATTCAAAGCAATGAATTTTCAAG CACCGAGATTTTAAAAAATAATGTTATTAAATATGTTTTTGAAAATGATAAAAAAAACATTGATTCTATCAAATTTGAAC TAAATAAACTCGTAAAATTAAATAAACTCAATGATCTTTCAGAAGAAGATCTAAATAAATTTGCTGAAAATTTAATTTCT TTTACCAAAGATCATTTTAAGGATAAAGAAGTTCTGGAAGAAGCTTGATATCATTGATTTCCAATGGCATTTTGATATGG CCTTTATGGAGTTGCTACTGTTTTTGATGTAACATTAAATTTTCTAGGGGCACTATTCAACCAACTCCCTACCATTTTAG ATGCAGTTGAAATTTATTCAAATATCGCTACTGGTAACTATGAAGCCGGAATGGTGAATAATCTCGTTTTAACCACCAAA ATATTAAACTCAATGTATATGAACGAAAAAAACATTATATCTAACTCGATCAATGATGCAAGCCTCGATTCTTTAGCTAA TTTTATAAACAATTCAGATGTGCGATCAGCAATTGTTAAACTTTTAAAAAACAGTATTATTAATCTTGCTTTTAATCCTA TAAATCAGCTAGTACAAGAAGGTATTAGACGTCTAAGTGCATATATTAGCTTTGACAAGGTTAAAATTTGAGCAAATTAC ATCTATTATTACAATTTATATTGAGGGGTAAATAGGGAAAATTAA
Upstream 100 bases:
>100_bases TTAAGTCTTATGGAGGAAAATTATGAAATACTCATTTATAAAATCGAATAAGTTTAAAATTTTTTCATCAGGATTAATGC TAACAACGTTGGCCAGTCCA
Downstream 100 bases:
>100_bases TTAATATTCATAAGTGTATATTAAAAAATGGTGTAAATATGCGTAATTTAATTAATTTAAAAATGAATACAAAATTTAAT TATGATAATTCCATAAAATT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 254; Mature: 254
Protein sequence:
>254_residues MLFTSIAPLQQKQIAPEIKIQSNEFSSTEILKNNVIKYVFENDKKNIDSIKFELNKLVKLNKLNDLSEEDLNKFAENLIS FTKDHFKDKEVLEEAWYHWFPMAFWYGLYGVATVFDVTLNFLGALFNQLPTILDAVEIYSNIATGNYEAGMVNNLVLTTK ILNSMYMNEKNIISNSINDASLDSLANFINNSDVRSAIVKLLKNSIINLAFNPINQLVQEGIRRLSAYISFDKVKIWANY IYYYNLYWGVNREN
Sequences:
>Translated_254_residues LLFTSIAPLQQKQIAPEIKIQSNEFSSTEILKNNVIKYVFENDKKNIDSIKFELNKLVKLNKLNDLSEEDLNKFAENLIS FTKDHFKDKEVLEEA*YH*FPMAF*YGLYGVATVFDVTLNFLGALFNQLPTILDAVEIYSNIATGNYEAGMVNNLVLTTK ILNSMYMNEKNIISNSINDASLDSLANFINNSDVRSAIVKLLKNSIINLAFNPINQLVQEGIRRLSAYISFDKVKI*ANY IYYYNLY*GVNREN >Mature_254_residues LLFTSIAPLQQKQIAPEIKIQSNEFSSTEILKNNVIKYVFENDKKNIDSIKFELNKLVKLNKLNDLSEEDLNKFAENLIS FTKDHFKDKEVLEEA*YH*FPMAF*YGLYGVATVFDVTLNFLGALFNQLPTILDAVEIYSNIATGNYEAGMVNNLVLTTK ILNSMYMNEKNIISNSINDASLDSLANFINNSDVRSAIVKLLKNSIINLAFNPINQLVQEGIRRLSAYISFDKVKI*ANY IYYYNLY*GVNREN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28337; Mature: 28337
Theoretical pI: Translated: 5.13; Mature: 5.13
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure LLFTSIAPLQQKQIAPEIKIQSNEFSSTEILKNNVIKYVFENDKKNIDSIKFELNKLVKL CCCCCCCCHHHHHCCCCEEECCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHH NKLNDLSEEDLNKFAENLISFTKDHFKDKEVLEEAYHFPMAFYGLYGVATVFDVTLNFLG HHCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHH ALFNQLPTILDAVEIYSNIATGNYEAGMVNNLVLTTKILNSMYMNEKNIISNSINDASLD HHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHCCCCHHHHH SLANFINNSDVRSAIVKLLKNSIINLAFNPINQLVQEGIRRLSAYISFDKVKIANYIYYY HHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEE NLYGVNREN EEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA