| Definition | Mycoplasma hyopneumoniae J chromosome, complete genome. |
|---|---|
| Accession | NC_007295 |
| Length | 897,405 |
Click here to switch to the map view.
The map label for this gene is 71893587
Identifier: 71893587
GI number: 71893587
Start: 272223
End: 272771
Strand: Reverse
Name: 71893587
Synonym: MHJ_0231
Alternate gene names: NA
Gene position: 272771-272223 (Counterclockwise)
Preceding gene: 71893588
Following gene: 229220848
Centisome position: 30.4
GC content: 24.59
Gene sequence:
>549_bases TTATCTCAACTTCCAGGGATTTTTGTCCCTGTCTATCAAGTTAGAAATATGGATATTTATCAAAGTAGAAATCCTCTGAT AATTTCAAAACCAATTGATACTACACCGCCTATTAAAATTTTGGCTGATAACATTGAAAGTATTTCTATGTTAGAAAGAT TTGATAAAAATTTTACAAAAATGCAAGAATTAATAGAAGATGTAGATTTTTCAAAATTTAGTGAAGTAGAAGAATATTTA AATTTTAACCTGGATAATTTTAATGATATTGAACAAAGAATAAGATTTAAAAAAGAATTTTATGAGAACTTAGAAGCGAT AAAGTCAAAAAGAATAACATCAACAGATGCTCTTAATTTATATTTTCAGCATTCAAATTTACCACTTGTTAATACTCAAA CACCAGAAATTCAAGAAAACAATTATGAAAACGATTTAATAAAAGAGGAAATGAATAGAAGCAAACCAAAAAGCCAAAAA AATTCTAATAATCTATCTGAAAAGAGCAATACTGCTAAAAAATTAACAAAAAATGAAGAAAAAAAATAA
Upstream 100 bases:
>100_bases AAACTTGAAATTGACAAGAAATTTTATCAGCTTGATCAATTAGCAAAAATTATAAATAATGAGGTGATTCATGAAGAAAA TTCTATTTAATTTAGGTGAT
Downstream 100 bases:
>100_bases TTGATGCAATACTAAATGATTCAGAGTGGGAAGAAAAATTTTTAAAATTACAAAATGAAACAAAGGAATCAAAGAAGCAA TTTGAGAAATTTTTAGGTAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 182; Mature: 182
Protein sequence:
>182_residues MSQLPGIFVPVYQVRNMDIYQSRNPLIISKPIDTTPPIKILADNIESISMLERFDKNFTKMQELIEDVDFSKFSEVEEYL NFNLDNFNDIEQRIRFKKEFYENLEAIKSKRITSTDALNLYFQHSNLPLVNTQTPEIQENNYENDLIKEEMNRSKPKSQK NSNNLSEKSNTAKKLTKNEEKK
Sequences:
>Translated_182_residues LSQLPGIFVPVYQVRNMDIYQSRNPLIISKPIDTTPPIKILADNIESISMLERFDKNFTKMQELIEDVDFSKFSEVEEYL NFNLDNFNDIEQRIRFKKEFYENLEAIKSKRITSTDALNLYFQHSNLPLVNTQTPEIQENNYENDLIKEEMNRSKPKSQK NSNNLSEKSNTAKKLTKNEEKK >Mature_182_residues LSQLPGIFVPVYQVRNMDIYQSRNPLIISKPIDTTPPIKILADNIESISMLERFDKNFTKMQELIEDVDFSKFSEVEEYL NFNLDNFNDIEQRIRFKKEFYENLEAIKSKRITSTDALNLYFQHSNLPLVNTQTPEIQENNYENDLIKEEMNRSKPKSQK NSNNLSEKSNTAKKLTKNEEKK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21460; Mature: 21460
Theoretical pI: Translated: 5.17; Mature: 5.17
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure LSQLPGIFVPVYQVRNMDIYQSRNPLIISKPIDTTPPIKILADNIESISMLERFDKNFTK CCCCCCHHHHHHHHHCCHHHCCCCCEEEECCCCCCCCHHHHHHCHHHHHHHHHHHHHHHH MQELIEDVDFSKFSEVEEYLNFNLDNFNDIEQRIRFKKEFYENLEAIKSKRITSTDALNL HHHHHHHCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEE YFQHSNLPLVNTQTPEIQENNYENDLIKEEMNRSKPKSQKNSNNLSEKSNTAKKLTKNEE EEECCCCCEECCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHCCC KK CC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA