| Definition | Mycoplasma hyopneumoniae J chromosome, complete genome. |
|---|---|
| Accession | NC_007295 |
| Length | 897,405 |
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The map label for this gene is 229220848
Identifier: 229220848
GI number: 229220848
Start: 271411
End: 271845
Strand: Reverse
Name: 229220848
Synonym: MHJ_0230
Alternate gene names: NA
Gene position: 271845-271411 (Counterclockwise)
Preceding gene: 71893587
Following gene: 71893585
Centisome position: 30.29
GC content: 27.13
Gene sequence:
>435_bases ATGTCATTTTATGAATTTAAGGATCAATTAAGAGAAGAAATTACAGAGCGTGGTATGGATTTAGGTTTTTATTATAATAT TGCAAATCTTTCTACAGCAACAAATCCAATACGAATATTAATCAAACAACAAATAGAAAAAATAATGGAAAAAACAATCA TAAAAATTATTGGCAGAAAAATAAGCGATGAAATTACAAAAGAAACAATTGCTAAATTATTAATAAAAAAAACTATATTT CTAAAATGGATTAAGAATGCCTATAAAATAATAAAACAACTTACAATTAAAACCGCGGCAAAACGCGGACTTTTAATGAG TGTTGGTTATGTAAATCCGATAAGTGCAGCGCTAAATATTCTCGATACTTTAAACTCAATTGTCTCGGTTGTAACTACAA TGGTAATTTCAGCAGAACTTCAAGAAAGCAAATAA
Upstream 100 bases:
>100_bases AGAATCTTTTAAAATCCAGAAAGAAATGGATGAAGATTGAGAAAAAATAAATCAATTTAAAAACTCCTCTGAATATGAAA GAATCATAAAATTTTCGGGA
Downstream 100 bases:
>100_bases AAAATGCAAAAAAAAGAAATTGAGAAATGAGTTCTTTTTTTTAATTGAAAAATCAGGAAAAATAAGTCAATTTTTTTGAT TTTTTCGCTGTTTTTTCTTG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 144; Mature: 143
Protein sequence:
>144_residues MSFYEFKDQLREEITERGMDLGFYYNIANLSTATNPIRILIKQQIEKIMEKTIIKIIGRKISDEITKETIAKLLIKKTIF LKWIKNAYKIIKQLTIKTAAKRGLLMSVGYVNPISAALNILDTLNSIVSVVTTMVISAELQESK
Sequences:
>Translated_144_residues MSFYEFKDQLREEITERGMDLGFYYNIANLSTATNPIRILIKQQIEKIMEKTIIKIIGRKISDEITKETIAKLLIKKTIF LKWIKNAYKIIKQLTIKTAAKRGLLMSVGYVNPISAALNILDTLNSIVSVVTTMVISAELQESK >Mature_143_residues SFYEFKDQLREEITERGMDLGFYYNIANLSTATNPIRILIKQQIEKIMEKTIIKIIGRKISDEITKETIAKLLIKKTIFL KWIKNAYKIIKQLTIKTAAKRGLLMSVGYVNPISAALNILDTLNSIVSVVTTMVISAELQESK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16427; Mature: 16296
Theoretical pI: Translated: 10.28; Mature: 10.28
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSFYEFKDQLREEITERGMDLGFYYNIANLSTATNPIRILIKQQIEKIMEKTIIKIIGRK CCHHHHHHHHHHHHHHCCCCHHHHEEHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH ISDEITKETIAKLLIKKTIFLKWIKNAYKIIKQLTIKTAAKRGLLMSVGYVNPISAALNI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCHHHHHHHH LDTLNSIVSVVTTMVISAELQESK HHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure SFYEFKDQLREEITERGMDLGFYYNIANLSTATNPIRILIKQQIEKIMEKTIIKIIGRK CHHHHHHHHHHHHHHCCCCHHHHEEHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH ISDEITKETIAKLLIKKTIFLKWIKNAYKIIKQLTIKTAAKRGLLMSVGYVNPISAALNI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCHHHHHHHH LDTLNSIVSVVTTMVISAELQESK HHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA