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The map label for this gene is rpoZ

Identifier: 71892383

GI number: 71892383

Start: 766329

End: 766520

Strand: Direct

Name: rpoZ

Synonym: BPEN_642

Alternate gene names: 71892383

Gene position: 766329-766520 (Clockwise)

Preceding gene: 71892382

Following gene: 71892384

Centisome position: 96.8

GC content: 32.81

Gene sequence:

>192_bases
ATGGCACGTATAACTGTACAGGATGCGGTAGAAAAAGTTGGTAATATATTTGATTTAATATTAGTTGCCGCGCGACGTGC
ACGGCAAATGCAAATTGGTGGAAAAGAAACATTAATTACGAAAAATAATAATGATAAATATACCGTGCTTGCTCTCAGAG
AAATAGAAGAAGACTTAATTACTAAAAAATAA

Upstream 100 bases:

>100_bases
ATAAATAATAAATTAATATAAATACATAAATATATATATGTGTTTGCGATCAATATGAATTTAAACTAATAAATAAAATC
CACATACACGGTAAATGAAA

Downstream 100 bases:

>100_bases
ATACCAACTATATATTGCTATCAAAAAATTAATATTGCTTAAGCCATGACATTGATATGCAGGAGAAACGGTTTCTTTAG
TATAATAGAAATTAAAAAAT

Product: DNA-directed RNA polymerase, subunit K/omega

Products: NA

Alternate protein names: RNAP omega subunit; RNA polymerase omega subunit; Transcriptase subunit omega

Number of amino acids: Translated: 63; Mature: 62

Protein sequence:

>63_residues
MARITVQDAVEKVGNIFDLILVAARRARQMQIGGKETLITKNNNDKYTVLALREIEEDLITKK

Sequences:

>Translated_63_residues
MARITVQDAVEKVGNIFDLILVAARRARQMQIGGKETLITKNNNDKYTVLALREIEEDLITKK
>Mature_62_residues
ARITVQDAVEKVGNIFDLILVAARRARQMQIGGKETLITKNNNDKYTVLALREIEEDLITKK

Specific function: Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits

COG id: COG1758

COG function: function code K; DNA-directed RNA polymerase, subunit K/omega

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the RNA polymerase subunit omega family

Homologues:

Organism=Escherichia coli, GI1790081, Length=63, Percent_Identity=71.4285714285714, Blast_Score=91, Evalue=1e-20,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): RPOZ_BLOPB (Q491W4)

Other databases:

- EMBL:   CP000016
- RefSeq:   YP_278117.1
- STRING:   Q491W4
- GeneID:   3562719
- GenomeReviews:   CP000016_GR
- KEGG:   bpn:BPEN_642
- eggNOG:   COG1758
- HOGENOM:   HBG742204
- OMA:   REIEEGF
- BioCyc:   CBLO291272:BPEN_642-MONOMER
- HAMAP:   MF_00366
- InterPro:   IPR003716
- InterPro:   IPR006110
- InterPro:   IPR012293
- Gene3D:   G3DSA:3.90.940.10
- TIGRFAMs:   TIGR00690

Pfam domain/function: PF01192 RNA_pol_Rpb6; SSF63562 RNA_pol_omega

EC number: =2.7.7.6

Molecular weight: Translated: 7157; Mature: 7026

Theoretical pI: Translated: 9.89; Mature: 9.89

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MARITVQDAVEKVGNIFDLILVAARRARQMQIGGKETLITKNNNDKYTVLALREIEEDLI
CCEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCEEEEEHHHHHHHHC
TKK
CCC
>Mature Secondary Structure 
ARITVQDAVEKVGNIFDLILVAARRARQMQIGGKETLITKNNNDKYTVLALREIEEDLI
CEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCEEEEEHHHHHHHHC
TKK
CCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA