Definition | Candidatus Blochmannia pennsylvanicus str. BPEN, complete genome. |
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Accession | NC_007292 |
Length | 791,654 |
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The map label for this gene is trxA [H]
Identifier: 71892352
GI number: 71892352
Start: 728530
End: 728856
Strand: Reverse
Name: trxA [H]
Synonym: BPEN_608
Alternate gene names: 71892352
Gene position: 728856-728530 (Counterclockwise)
Preceding gene: 71892353
Following gene: 71892351
Centisome position: 92.07
GC content: 28.75
Gene sequence:
>327_bases ATGAATCAAATTATCATGCACCTGACAGATTCTAATTTTAAAGAAACGGTGTCAAACTCTACCGATCTTTTTTTAGTTGA TTTTTGGGCCGAATGGTGTAATCCCTGTAAAGCAATGATACCTATTTTAGAAGATATTTCTGTTGAATTTAATGATACAT TAAAAGTAGTAAAATTAAACATAGATGAAAATCCAATAACTACAAAAAACTATGGGATTAAGAGTGTTCCTACTTTATTA TTGATTCGTCATGGAACGGTGTTATCTACTAAAGTAGGGTTGCTGTCCAAACAAAAATTACAAGAATTTTTAAAAATACA TATATAA
Upstream 100 bases:
>100_bases TATATAAATAATTTTAAATATTCAACGATATACATAAAATAAATAAGTTAATTATAATGATATATAATGATTAGAAGAAA ATAAATTATAAGGAGGATAA
Downstream 100 bases:
>100_bases ATAATGAGCACTTATTTTTAAAACATTTATAATTTTTAAAATTATTTTATATGTTAGTAGACGTTTCTTTAGGATTACAG TAGAATGACAGCATGTCGTA
Product: thioredoxin 1, redox factor
Products: NA
Alternate protein names: Trx [H]
Number of amino acids: Translated: 108; Mature: 108
Protein sequence:
>108_residues MNQIIMHLTDSNFKETVSNSTDLFLVDFWAEWCNPCKAMIPILEDISVEFNDTLKVVKLNIDENPITTKNYGIKSVPTLL LIRHGTVLSTKVGLLSKQKLQEFLKIHI
Sequences:
>Translated_108_residues MNQIIMHLTDSNFKETVSNSTDLFLVDFWAEWCNPCKAMIPILEDISVEFNDTLKVVKLNIDENPITTKNYGIKSVPTLL LIRHGTVLSTKVGLLSKQKLQEFLKIHI >Mature_108_residues MNQIIMHLTDSNFKETVSNSTDLFLVDFWAEWCNPCKAMIPILEDISVEFNDTLKVVKLNIDENPITTKNYGIKSVPTLL LIRHGTVLSTKVGLLSKQKLQEFLKIHI
Specific function: Participates in various redox reactions through the reversible oxidation of its active center dithiol to a disulfide and catalyzes dithiol-disulfide exchange reactions [H]
COG id: COG0526
COG function: function code OC; Thiol-disulfide isomerase and thioredoxins
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 thioredoxin domain [H]
Homologues:
Organism=Homo sapiens, GI21361403, Length=94, Percent_Identity=34.0425531914894, Blast_Score=68, Evalue=1e-12, Organism=Escherichia coli, GI87082331, Length=108, Percent_Identity=51.8518518518518, Blast_Score=124, Evalue=2e-30, Organism=Escherichia coli, GI1788936, Length=80, Percent_Identity=32.5, Blast_Score=69, Evalue=5e-14, Organism=Caenorhabditis elegans, GI212646193, Length=94, Percent_Identity=34.0425531914894, Blast_Score=69, Evalue=4e-13, Organism=Drosophila melanogaster, GI28573567, Length=96, Percent_Identity=36.4583333333333, Blast_Score=75, Evalue=6e-15, Organism=Drosophila melanogaster, GI24639826, Length=85, Percent_Identity=38.8235294117647, Blast_Score=74, Evalue=1e-14, Organism=Drosophila melanogaster, GI17648013, Length=89, Percent_Identity=33.7078651685393, Blast_Score=64, Evalue=2e-11, Organism=Drosophila melanogaster, GI24583090, Length=89, Percent_Identity=33.7078651685393, Blast_Score=64, Evalue=2e-11,
Paralogues:
None
Copy number: 3,500 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005746 - InterPro: IPR017936 - InterPro: IPR012336 - InterPro: IPR013766 - InterPro: IPR012335 [H]
Pfam domain/function: PF00085 Thioredoxin [H]
EC number: NA
Molecular weight: Translated: 12345; Mature: 12345
Theoretical pI: Translated: 6.78; Mature: 6.78
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNQIIMHLTDSNFKETVSNSTDLFLVDFWAEWCNPCKAMIPILEDISVEFNDTLKVVKLN CCCEEEEECCCCHHHHHCCCCCEEEEEHHHHHHCHHHHHHHHHHHCCCCCCCCEEEEEEE IDENPITTKNYGIKSVPTLLLIRHGTVLSTKVGLLSKQKLQEFLKIHI CCCCCCCCCCCCCCCCCEEEEEECCCEEEHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MNQIIMHLTDSNFKETVSNSTDLFLVDFWAEWCNPCKAMIPILEDISVEFNDTLKVVKLN CCCEEEEECCCCHHHHHCCCCCEEEEEHHHHHHCHHHHHHHHHHHCCCCCCCCEEEEEEE IDENPITTKNYGIKSVPTLLLIRHGTVLSTKVGLLSKQKLQEFLKIHI CCCCCCCCCCCCCCCCCEEEEEECCCEEEHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: Reduction reactions; participates in dithiol-disulfide exchange reactions [C]
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 10993077 [H]