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The map label for this gene is rpe [H]

Identifier: 71892339

GI number: 71892339

Start: 709268

End: 709933

Strand: Reverse

Name: rpe [H]

Synonym: BPEN_590

Alternate gene names: 71892339

Gene position: 709933-709268 (Counterclockwise)

Preceding gene: 71892340

Following gene: 71892338

Centisome position: 89.68

GC content: 31.08

Gene sequence:

>666_bases
ATGAAACGTTTCTTAATAGCTCCATCTATTTTGTCAGCTAATTTTGCTAAATTAGGAGAAGATGTTACTAATGTTGTATC
TGCTGGCGCAGATATTTTACATTTTGATGTTATGGACAATCATTATGTTCCTAATTTGAGCGTAGGATCTATGGTGTTAC
GGTCATTACGTAGTTATGGAGTTAGTATCCCTATTGATGTGCATTTAATGGCAAAACCAATAGATCGATTAATTTCAGAT
TTCGCTGCTGTTGGAGCAAATTATATTAGTTTTCATCCAGAAGCAACAGAACATATTGATCGATCATTACAATTGATTAA
AGAATACGGATGTAAAGCGGGATTAGTTTTTAACCCTAGCACTACTCTTAATTATTTGGAATACGTAATGGATAAAATTG
ACCTAATTGTATTAATGTCAGTAAATCCGGGTTTTAGCGGACAATTGTTTATTCCCATGATTTTAAATAAAATACGTCAA
ACACGTAAATTAATAGACAATACCAACTATAATATTGATTTAGCAGTGGATGGAGGTATTAATATAAAAAACATACATTC
AATTTTAAAAGCTGGTGCAACCACGTTTATTATAGGATCAGCTATCTTTGGATCTGAAAATTATTACGAGGTTATACATA
ATTTTCGATCTGTTTTATCAAATTAA

Upstream 100 bases:

>100_bases
TAAAAGATAATAATATAATCTTTCTAAATTTATATTATTATTTGATTTAATTAAATTAAAATGAACTATTTTATAGTATA
TAATCTTTAATGGAAATTAA

Downstream 100 bases:

>100_bases
TAACGAAAGATATTTAGTATTTTATTTTTAAATAAATAATTAAAGGAATATAATTTATAATTACCATAATTATTTTATTT
GAAACAAATGTTATTTAACA

Product: ribulose-phosphate 3-epimerase

Products: NA

Alternate protein names: Pentose-5-phosphate 3-epimerase; PPE; R5P3E [H]

Number of amino acids: Translated: 221; Mature: 221

Protein sequence:

>221_residues
MKRFLIAPSILSANFAKLGEDVTNVVSAGADILHFDVMDNHYVPNLSVGSMVLRSLRSYGVSIPIDVHLMAKPIDRLISD
FAAVGANYISFHPEATEHIDRSLQLIKEYGCKAGLVFNPSTTLNYLEYVMDKIDLIVLMSVNPGFSGQLFIPMILNKIRQ
TRKLIDNTNYNIDLAVDGGINIKNIHSILKAGATTFIIGSAIFGSENYYEVIHNFRSVLSN

Sequences:

>Translated_221_residues
MKRFLIAPSILSANFAKLGEDVTNVVSAGADILHFDVMDNHYVPNLSVGSMVLRSLRSYGVSIPIDVHLMAKPIDRLISD
FAAVGANYISFHPEATEHIDRSLQLIKEYGCKAGLVFNPSTTLNYLEYVMDKIDLIVLMSVNPGFSGQLFIPMILNKIRQ
TRKLIDNTNYNIDLAVDGGINIKNIHSILKAGATTFIIGSAIFGSENYYEVIHNFRSVLSN
>Mature_221_residues
MKRFLIAPSILSANFAKLGEDVTNVVSAGADILHFDVMDNHYVPNLSVGSMVLRSLRSYGVSIPIDVHLMAKPIDRLISD
FAAVGANYISFHPEATEHIDRSLQLIKEYGCKAGLVFNPSTTLNYLEYVMDKIDLIVLMSVNPGFSGQLFIPMILNKIRQ
TRKLIDNTNYNIDLAVDGGINIKNIHSILKAGATTFIIGSAIFGSENYYEVIHNFRSVLSN

Specific function: Unknown

COG id: COG0036

COG function: function code G; Pentose-5-phosphate-3-epimerase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ribulose-phosphate 3-epimerase family [H]

Homologues:

Organism=Homo sapiens, GI40385883, Length=218, Percent_Identity=38.0733944954128, Blast_Score=155, Evalue=2e-38,
Organism=Homo sapiens, GI219879828, Length=218, Percent_Identity=36.2385321100917, Blast_Score=145, Evalue=4e-35,
Organism=Homo sapiens, GI24307923, Length=173, Percent_Identity=31.2138728323699, Blast_Score=94, Evalue=7e-20,
Organism=Escherichia coli, GI1789788, Length=221, Percent_Identity=63.3484162895928, Blast_Score=313, Evalue=5e-87,
Organism=Escherichia coli, GI1790523, Length=197, Percent_Identity=31.9796954314721, Blast_Score=130, Evalue=5e-32,
Organism=Escherichia coli, GI1790754, Length=214, Percent_Identity=27.5700934579439, Blast_Score=101, Evalue=4e-23,
Organism=Caenorhabditis elegans, GI17552948, Length=223, Percent_Identity=33.6322869955157, Blast_Score=133, Evalue=7e-32,
Organism=Saccharomyces cerevisiae, GI6322341, Length=236, Percent_Identity=33.8983050847458, Blast_Score=147, Evalue=1e-36,
Organism=Drosophila melanogaster, GI24586301, Length=215, Percent_Identity=34.8837209302326, Blast_Score=146, Evalue=1e-35,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013785
- InterPro:   IPR000056
- InterPro:   IPR011060 [H]

Pfam domain/function: PF00834 Ribul_P_3_epim [H]

EC number: =5.1.3.1 [H]

Molecular weight: Translated: 24452; Mature: 24452

Theoretical pI: Translated: 6.89; Mature: 6.89

Prosite motif: PS01085 RIBUL_P_3_EPIMER_1 ; PS01086 RIBUL_P_3_EPIMER_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRFLIAPSILSANFAKLGEDVTNVVSAGADILHFDVMDNHYVPNLSVGSMVLRSLRSYG
CCCEEECCHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHCC
VSIPIDVHLMAKPIDRLISDFAAVGANYISFHPEATEHIDRSLQLIKEYGCKAGLVFNPS
CCCCEEHHHHHHHHHHHHHHHHHHCCHHEEECCCHHHHHHHHHHHHHHCCCCCCEEECCC
TTLNYLEYVMDKIDLIVLMSVNPGFSGQLFIPMILNKIRQTRKLIDNTNYNIDLAVDGGI
HHHHHHHHHHHHHCEEEEEECCCCCCCCEEHHHHHHHHHHHHHHHCCCCCEEEEEECCCC
NIKNIHSILKAGATTFIIGSAIFGSENYYEVIHNFRSVLSN
CHHHHHHHHHCCCHHEEEEHHHHCCCHHHHHHHHHHHHHCC
>Mature Secondary Structure
MKRFLIAPSILSANFAKLGEDVTNVVSAGADILHFDVMDNHYVPNLSVGSMVLRSLRSYG
CCCEEECCHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHCC
VSIPIDVHLMAKPIDRLISDFAAVGANYISFHPEATEHIDRSLQLIKEYGCKAGLVFNPS
CCCCEEHHHHHHHHHHHHHHHHHHCCHHEEECCCHHHHHHHHHHHHHHCCCCCCEEECCC
TTLNYLEYVMDKIDLIVLMSVNPGFSGQLFIPMILNKIRQTRKLIDNTNYNIDLAVDGGI
HHHHHHHHHHHHHCEEEEEECCCCCCCCEEHHHHHHHHHHHHHHHCCCCCEEEEEECCCC
NIKNIHSILKAGATTFIIGSAIFGSENYYEVIHNFRSVLSN
CHHHHHHHHHCCCHHEEEEHHHHCCCHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]