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The map label for this gene is trpS [H]

Identifier: 71892338

GI number: 71892338

Start: 708033

End: 709031

Strand: Reverse

Name: trpS [H]

Synonym: BPEN_589

Alternate gene names: 71892338

Gene position: 709031-708033 (Counterclockwise)

Preceding gene: 71892339

Following gene: 71892337

Centisome position: 89.56

GC content: 28.83

Gene sequence:

>999_bases
ATGAATAAACCAATTTTATTTAGCGGAGCGCAGCCATCAGGTGAACTTACTATTGGTAATTATATCGGAGCGATACGTCA
GTGGGTTAAAATGCAACAAGATTATCAATGTATATATTGTATAGTAGATTTACATGCAATTGCAAATCAAAATAATTTAC
ATCGATTATATGAAACATCATTAGATACATTAGCTTTATATTTAGCATGTGGTATTGATCCTAATAATAGTACAATATTT
ATTCAGTCCCATGTTCCAGAGCATAGTCAATTAAATTGGTTATTAAATTGTTATACGTATTTTGGAGAGCTAAATCGTAT
GACTCAATTCAAAGAAAAATTAATACAACAAAAGGAAAATGTTAATATCGGGTTATTCAACTATCCAGTACTAATGGCAT
CAGATATTTTGTTATATCAAACTAATTTAGTTCCGGTAGGTTCTGATCAGAAACAACATTTAGAATTAACACGTAACATT
GCTGAACGTTTTAATCATACATACGGAACAATTTTCGTTGTTCCAGAAGTATTTATTCCTACATGTGGTTCTCGTATTAT
GTCCTTGTTAGAACCAAATAAAAAAATGTCTAAATCAGATCGTAGATCTGGTAATATGATTACTCTTTTGGATGATATTA
ATATGGTATCAAAAAAAATTAAACGTGCTGTTACCGATACCGATCAACCTCCAAGAATTAAATACGATCCTATTAACAAA
CCAGGTATTTCTAATTTGTTAGAGATTCTTTCCGGAATAAGTGATCAACCTATTACGTATTTAGAAGAAATTTTTAAAGA
AAAAACATATTTCCAGTTAAAAAATGAAATTATTAAATCAATATCATCGGTGTTGATAAAATTTCAAAATCGTTATTATA
CTGAACGTTCTAATGAAGATAAATTACGTTATATATTGTGTGTAGGAGCAAAAAAAGCGCAAAAAAAAGCTAATGTCACT
TTAAAAAAAGTACATAAAGCAATGGGATTGAGTAATTAA

Upstream 100 bases:

>100_bases
TATATAACTTATAACATACAAACTATATGTTTTTGCTGTGTAAACTTTAAAAGTAATAACATTTTAATTTTTTATTATAA
ACACTATGGAATATATCTGT

Downstream 100 bases:

>100_bases
TTAAAAATAATTAATTTTTAATTTCATTAAATATAATAATATATATGTATAGTAGGCACATAAGTAAAAATAAAATATTA
TTTAAATTTAAAAAACGCAT

Product: tryptophanyl-tRNA synthetase

Products: NA

Alternate protein names: Tryptophan--tRNA ligase; TrpRS [H]

Number of amino acids: Translated: 332; Mature: 332

Protein sequence:

>332_residues
MNKPILFSGAQPSGELTIGNYIGAIRQWVKMQQDYQCIYCIVDLHAIANQNNLHRLYETSLDTLALYLACGIDPNNSTIF
IQSHVPEHSQLNWLLNCYTYFGELNRMTQFKEKLIQQKENVNIGLFNYPVLMASDILLYQTNLVPVGSDQKQHLELTRNI
AERFNHTYGTIFVVPEVFIPTCGSRIMSLLEPNKKMSKSDRRSGNMITLLDDINMVSKKIKRAVTDTDQPPRIKYDPINK
PGISNLLEILSGISDQPITYLEEIFKEKTYFQLKNEIIKSISSVLIKFQNRYYTERSNEDKLRYILCVGAKKAQKKANVT
LKKVHKAMGLSN

Sequences:

>Translated_332_residues
MNKPILFSGAQPSGELTIGNYIGAIRQWVKMQQDYQCIYCIVDLHAIANQNNLHRLYETSLDTLALYLACGIDPNNSTIF
IQSHVPEHSQLNWLLNCYTYFGELNRMTQFKEKLIQQKENVNIGLFNYPVLMASDILLYQTNLVPVGSDQKQHLELTRNI
AERFNHTYGTIFVVPEVFIPTCGSRIMSLLEPNKKMSKSDRRSGNMITLLDDINMVSKKIKRAVTDTDQPPRIKYDPINK
PGISNLLEILSGISDQPITYLEEIFKEKTYFQLKNEIIKSISSVLIKFQNRYYTERSNEDKLRYILCVGAKKAQKKANVT
LKKVHKAMGLSN
>Mature_332_residues
MNKPILFSGAQPSGELTIGNYIGAIRQWVKMQQDYQCIYCIVDLHAIANQNNLHRLYETSLDTLALYLACGIDPNNSTIF
IQSHVPEHSQLNWLLNCYTYFGELNRMTQFKEKLIQQKENVNIGLFNYPVLMASDILLYQTNLVPVGSDQKQHLELTRNI
AERFNHTYGTIFVVPEVFIPTCGSRIMSLLEPNKKMSKSDRRSGNMITLLDDINMVSKKIKRAVTDTDQPPRIKYDPINK
PGISNLLEILSGISDQPITYLEEIFKEKTYFQLKNEIIKSISSVLIKFQNRYYTERSNEDKLRYILCVGAKKAQKKANVT
LKKVHKAMGLSN

Specific function: Unknown

COG id: COG0180

COG function: function code J; Tryptophanyl-tRNA synthetase

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the class-I aminoacyl-tRNA synthetase family [H]

Homologues:

Organism=Homo sapiens, GI7710154, Length=333, Percent_Identity=36.3363363363363, Blast_Score=228, Evalue=5e-60,
Organism=Homo sapiens, GI41352700, Length=182, Percent_Identity=46.7032967032967, Blast_Score=182, Evalue=5e-46,
Organism=Escherichia coli, GI1789786, Length=330, Percent_Identity=63.030303030303, Blast_Score=444, Evalue=1e-126,
Organism=Caenorhabditis elegans, GI71982800, Length=333, Percent_Identity=31.5315315315315, Blast_Score=177, Evalue=9e-45,
Organism=Caenorhabditis elegans, GI71982793, Length=333, Percent_Identity=31.5315315315315, Blast_Score=175, Evalue=3e-44,
Organism=Saccharomyces cerevisiae, GI6320474, Length=347, Percent_Identity=38.328530259366, Blast_Score=219, Evalue=3e-58,
Organism=Drosophila melanogaster, GI24666151, Length=329, Percent_Identity=39.209726443769, Blast_Score=231, Evalue=6e-61,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001412
- InterPro:   IPR002305
- InterPro:   IPR014729
- InterPro:   IPR002306 [H]

Pfam domain/function: PF00579 tRNA-synt_1b [H]

EC number: =6.1.1.2 [H]

Molecular weight: Translated: 38122; Mature: 38122

Theoretical pI: Translated: 9.30; Mature: 9.30

Prosite motif: PS00178 AA_TRNA_LIGASE_I

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNKPILFSGAQPSGELTIGNYIGAIRQWVKMQQDYQCIYCIVDLHAIANQNNLHRLYETS
CCCCEEEECCCCCCCEEHHHHHHHHHHHHHHHCCCEEEHHHHHHHHHHCCCCHHHHHHHH
LDTLALYLACGIDPNNSTIFIQSHVPEHSQLNWLLNCYTYFGELNRMTQFKEKLIQQKEN
HHHHHHHHHCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
VNIGLFNYPVLMASDILLYQTNLVPVGSDQKQHLELTRNIAERFNHTYGTIFVVPEVFIP
CCEEEEECHHHHHCCCCEEEECEEECCCCHHHHHHHHHHHHHHHCCCCEEEEEECCHHHC
TCGSRIMSLLEPNKKMSKSDRRSGNMITLLDDINMVSKKIKRAVTDTDQPPRIKYDPINK
HHHHHHHHHHCCCHHHCHHHCCCCCEEEEEHHHHHHHHHHHHHHCCCCCCCCEEECCCCC
PGISNLLEILSGISDQPITYLEEIFKEKTYFQLKNEIIKSISSVLIKFQNRYYTERSNED
CCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
KLRYILCVGAKKAQKKANVTLKKVHKAMGLSN
CEEEEEEECCHHHHHHHCHHHHHHHHHHCCCC
>Mature Secondary Structure
MNKPILFSGAQPSGELTIGNYIGAIRQWVKMQQDYQCIYCIVDLHAIANQNNLHRLYETS
CCCCEEEECCCCCCCEEHHHHHHHHHHHHHHHCCCEEEHHHHHHHHHHCCCCHHHHHHHH
LDTLALYLACGIDPNNSTIFIQSHVPEHSQLNWLLNCYTYFGELNRMTQFKEKLIQQKEN
HHHHHHHHHCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
VNIGLFNYPVLMASDILLYQTNLVPVGSDQKQHLELTRNIAERFNHTYGTIFVVPEVFIP
CCEEEEECHHHHHCCCCEEEECEEECCCCHHHHHHHHHHHHHHHCCCCEEEEEECCHHHC
TCGSRIMSLLEPNKKMSKSDRRSGNMITLLDDINMVSKKIKRAVTDTDQPPRIKYDPINK
HHHHHHHHHHCCCHHHCHHHCCCCCEEEEEHHHHHHHHHHHHHHCCCCCCCCEEECCCCC
PGISNLLEILSGISDQPITYLEEIFKEKTYFQLKNEIIKSISSVLIKFQNRYYTERSNED
CCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
KLRYILCVGAKKAQKKANVTLKKVHKAMGLSN
CEEEEEEECCHHHHHHHCHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12886019 [H]