Definition | Candidatus Blochmannia pennsylvanicus str. BPEN, complete genome. |
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Accession | NC_007292 |
Length | 791,654 |
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The map label for this gene is tktA [H]
Identifier: 71892286
GI number: 71892286
Start: 637742
End: 639739
Strand: Direct
Name: tktA [H]
Synonym: BPEN_533
Alternate gene names: 71892286
Gene position: 637742-639739 (Clockwise)
Preceding gene: 71892285
Following gene: 71892287
Centisome position: 80.56
GC content: 34.78
Gene sequence:
>1998_bases ATGTTATCAGAAAAAATATTAGCTAATGCTATACGTATATTAAGCATAGATGCTATACAAAAAGCCAATTCTGGACATCC CGGCTGTCCCATGGGCATGGCGGATATTGCTGAAGTATTGTGGAGAGATTACTTAAATCACAACCCAAACAATCCCAATT GGATTAATAGAGACCGATTTGTTTTATCTAATGGACATGGATCAATGCTGCTATATAGCATACTACATTTAACTGGATAC AAAATATCTATAGAAGATCTAAAAAATTTTAGACAATTAAATTCAACAACACCCGGACATCCAGAATATGGGCATACGGA TGGAATTGAGGTTACAACAGGTCCGTTAGGGCAGGGTCTTGCTAACGCTGTAGGATTTGCAATTGCTGAACGAACACTAG CAGCTCAATTTAATCGCGCACAGTTTAATATCATCAATCATTATACTTATGCATTTCTAGGAGATGGATGCATGATGGAA GGTATTTCTCATGAAGCTTGCGCGCTAGCTGGGACTATGAAATTAAATAAATTGATTATATTTTACGATAATAATGGTAT TTCTATAGACGGAAATGTACAAGAATGGTTCACAGATGATACTGCTATGCGTTTTGAATCTTATGGATGGCATGTAGTAC GTAATGTAAATGGACATAATAGAAATTCTGTTAAAGCTGCAATTGATCAAGCTCAATCCACATTAGATAAACCATCATTG TTAATATGTAATACTATTATTGCTTTCGGAGCTCCAAATAAAAGCGGAACACATAGCGCTCACGGCGCTCCATTAGGAGC AGAAGAAGTGGCTGCTACTCGAAAAGCGCTTAATTGGAATGAACCTCCATTCGTCATACCAAAAGCAATATATAAATCAT GGAATGCCACGATACCGGGACAAAAAAAAGAAGATAATTGGCAACAACTTTTTCACAAATACCAAGTTACCTATCCTAAT TTAGCAAAGGAATTAATAAGAAGAATACAACGAAAACTACCCGAAGATTGGCATAAAAAAACACAAAAATTTATTGAAAA TTTACAAATGCATTCTCAAAATATTGCTACACGTCAAGCTTCTCAAATTACAATTGAATTTTTTTCCAAAGAATTACCAG AGCTTTTTGGTGGATCATCAGACTTAACACCCAGCAATTTGACAACTTGGTCTCAATCTTCTTCTATTATGAAAAATCCT GCCGGAAATTATATTCATTACGGTGTACGTGAATTCGGGATGACTGCTATTGCCAATGGAATTGCTAATTATGGAGCTTT TTTACCTTATACTGCTACATTTTTAACATTTGTTGAATACGCACGCAACGCGGTTCGCATGGCGGCATTAATGAATAGTC ATCATATTATGATTTATACTCATGATTCTATTGGATTAGGAGAAGATGGTCCAACTCATCAACCTATAGAACAATTATCA AGTTTACGTATGACTCCCAATTTAATAGTATGGCGTCCCTGTGATCAAGTAGAAACAGCAATTGCCTGGAAATCAGCAAT TGAACACCATGGGCCAACCGCATTGATTTTATCTAGACAAAATCTCATGCAGCAAGAACGCACATCAACACAAATTAATA ACATTAATCGCGGAGGATATATTCTTAAAGATTGTCAAAATATCCCTGAATTAATTATAATTGCTACTGGGTCAGAAATA ATATTAGCAATACAAGCATATTACCGATTAACTGATGAAGGCTATAAAATACGAGTCATCTCGTTACCTTCTACTAATAT ATTTGATCAGCAAGATAAATCATATCGTGAATACGTATTACCAAGCACAATAATTAATAGAATAGCTATCGAAGCTAGTA GCACTGACTATTGGTATAAGTATGTTGGAATATATGGTGAAATCATTGGTATGAAGACATTCGGAAAATCAGCTCCATCA CATCAATTATTTAAATTTTTTGACTTTACTGTGGACTACGTGATCAATAAATCATATAAATTACTCAAAAAATCCTAA
Upstream 100 bases:
>100_bases TAAGTATGGAAAAATTCACTAAACATATTCGATAATTCTCTATAAGAGAGAAGAATTTATAATCATTTAATTAAAACATT CAATATTAGGAAAATACTTT
Downstream 100 bases:
>100_bases AACAACAGATCACCAAAAATGTTTAATTTTTATAAAAAACATCTATATACAACTATATCAATAAATATCGGTATAGTTGT ATATCTGAATTTTACATTGA
Product: transketolase
Products: NA
Alternate protein names: TK 1 [H]
Number of amino acids: Translated: 665; Mature: 665
Protein sequence:
>665_residues MLSEKILANAIRILSIDAIQKANSGHPGCPMGMADIAEVLWRDYLNHNPNNPNWINRDRFVLSNGHGSMLLYSILHLTGY KISIEDLKNFRQLNSTTPGHPEYGHTDGIEVTTGPLGQGLANAVGFAIAERTLAAQFNRAQFNIINHYTYAFLGDGCMME GISHEACALAGTMKLNKLIIFYDNNGISIDGNVQEWFTDDTAMRFESYGWHVVRNVNGHNRNSVKAAIDQAQSTLDKPSL LICNTIIAFGAPNKSGTHSAHGAPLGAEEVAATRKALNWNEPPFVIPKAIYKSWNATIPGQKKEDNWQQLFHKYQVTYPN LAKELIRRIQRKLPEDWHKKTQKFIENLQMHSQNIATRQASQITIEFFSKELPELFGGSSDLTPSNLTTWSQSSSIMKNP AGNYIHYGVREFGMTAIANGIANYGAFLPYTATFLTFVEYARNAVRMAALMNSHHIMIYTHDSIGLGEDGPTHQPIEQLS SLRMTPNLIVWRPCDQVETAIAWKSAIEHHGPTALILSRQNLMQQERTSTQINNINRGGYILKDCQNIPELIIIATGSEI ILAIQAYYRLTDEGYKIRVISLPSTNIFDQQDKSYREYVLPSTIINRIAIEASSTDYWYKYVGIYGEIIGMKTFGKSAPS HQLFKFFDFTVDYVINKSYKLLKKS
Sequences:
>Translated_665_residues MLSEKILANAIRILSIDAIQKANSGHPGCPMGMADIAEVLWRDYLNHNPNNPNWINRDRFVLSNGHGSMLLYSILHLTGY KISIEDLKNFRQLNSTTPGHPEYGHTDGIEVTTGPLGQGLANAVGFAIAERTLAAQFNRAQFNIINHYTYAFLGDGCMME GISHEACALAGTMKLNKLIIFYDNNGISIDGNVQEWFTDDTAMRFESYGWHVVRNVNGHNRNSVKAAIDQAQSTLDKPSL LICNTIIAFGAPNKSGTHSAHGAPLGAEEVAATRKALNWNEPPFVIPKAIYKSWNATIPGQKKEDNWQQLFHKYQVTYPN LAKELIRRIQRKLPEDWHKKTQKFIENLQMHSQNIATRQASQITIEFFSKELPELFGGSSDLTPSNLTTWSQSSSIMKNP AGNYIHYGVREFGMTAIANGIANYGAFLPYTATFLTFVEYARNAVRMAALMNSHHIMIYTHDSIGLGEDGPTHQPIEQLS SLRMTPNLIVWRPCDQVETAIAWKSAIEHHGPTALILSRQNLMQQERTSTQINNINRGGYILKDCQNIPELIIIATGSEI ILAIQAYYRLTDEGYKIRVISLPSTNIFDQQDKSYREYVLPSTIINRIAIEASSTDYWYKYVGIYGEIIGMKTFGKSAPS HQLFKFFDFTVDYVINKSYKLLKKS >Mature_665_residues MLSEKILANAIRILSIDAIQKANSGHPGCPMGMADIAEVLWRDYLNHNPNNPNWINRDRFVLSNGHGSMLLYSILHLTGY KISIEDLKNFRQLNSTTPGHPEYGHTDGIEVTTGPLGQGLANAVGFAIAERTLAAQFNRAQFNIINHYTYAFLGDGCMME GISHEACALAGTMKLNKLIIFYDNNGISIDGNVQEWFTDDTAMRFESYGWHVVRNVNGHNRNSVKAAIDQAQSTLDKPSL LICNTIIAFGAPNKSGTHSAHGAPLGAEEVAATRKALNWNEPPFVIPKAIYKSWNATIPGQKKEDNWQQLFHKYQVTYPN LAKELIRRIQRKLPEDWHKKTQKFIENLQMHSQNIATRQASQITIEFFSKELPELFGGSSDLTPSNLTTWSQSSSIMKNP AGNYIHYGVREFGMTAIANGIANYGAFLPYTATFLTFVEYARNAVRMAALMNSHHIMIYTHDSIGLGEDGPTHQPIEQLS SLRMTPNLIVWRPCDQVETAIAWKSAIEHHGPTALILSRQNLMQQERTSTQINNINRGGYILKDCQNIPELIIIATGSEI ILAIQAYYRLTDEGYKIRVISLPSTNIFDQQDKSYREYVLPSTIINRIAIEASSTDYWYKYVGIYGEIIGMKTFGKSAPS HQLFKFFDFTVDYVINKSYKLLKKS
Specific function: Unknown
COG id: COG0021
COG function: function code G; Transketolase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the transketolase family [H]
Homologues:
Organism=Homo sapiens, GI205277463, Length=694, Percent_Identity=26.657060518732, Blast_Score=165, Evalue=1e-40, Organism=Homo sapiens, GI4507521, Length=694, Percent_Identity=26.657060518732, Blast_Score=165, Evalue=1e-40, Organism=Homo sapiens, GI133778974, Length=575, Percent_Identity=26.2608695652174, Blast_Score=136, Evalue=7e-32, Organism=Escherichia coli, GI48994911, Length=663, Percent_Identity=65.6108597285068, Blast_Score=960, Evalue=0.0, Organism=Escherichia coli, GI1788808, Length=662, Percent_Identity=63.8972809667674, Blast_Score=930, Evalue=0.0, Organism=Caenorhabditis elegans, GI17539652, Length=579, Percent_Identity=25.0431778929188, Blast_Score=161, Evalue=1e-39, Organism=Saccharomyces cerevisiae, GI6325331, Length=671, Percent_Identity=47.0938897168405, Blast_Score=605, Evalue=1e-174, Organism=Saccharomyces cerevisiae, GI6319593, Length=674, Percent_Identity=45.5489614243323, Blast_Score=585, Evalue=1e-168, Organism=Drosophila melanogaster, GI45551847, Length=683, Percent_Identity=25.9150805270864, Blast_Score=164, Evalue=2e-40, Organism=Drosophila melanogaster, GI45550715, Length=683, Percent_Identity=25.9150805270864, Blast_Score=164, Evalue=2e-40, Organism=Drosophila melanogaster, GI24645119, Length=649, Percent_Identity=24.9614791987673, Blast_Score=140, Evalue=4e-33, Organism=Drosophila melanogaster, GI24666278, Length=586, Percent_Identity=24.061433447099, Blast_Score=140, Evalue=4e-33,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR009014 - InterPro: IPR015941 - InterPro: IPR005475 - InterPro: IPR005478 - InterPro: IPR020826 - InterPro: IPR005476 - InterPro: IPR005474 [H]
Pfam domain/function: PF02779 Transket_pyr; PF02780 Transketolase_C; PF00456 Transketolase_N [H]
EC number: =2.2.1.1 [H]
Molecular weight: Translated: 74799; Mature: 74799
Theoretical pI: Translated: 8.15; Mature: 8.15
Prosite motif: PS00801 TRANSKETOLASE_1 ; PS00802 TRANSKETOLASE_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLSEKILANAIRILSIDAIQKANSGHPGCPMGMADIAEVLWRDYLNHNPNNPNWINRDRF CCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCEE VLSNGHGSMLLYSILHLTGYKISIEDLKNFRQLNSTTPGHPEYGHTDGIEVTTGPLGQGL EEECCCCHHHHHHHHHHCCCEEEHHHHHHHHHHCCCCCCCCCCCCCCCCEEECCCCCHHH ANAVGFAIAERTLAAQFNRAQFNIINHYTYAFLGDGCMMEGISHEACALAGTMKLNKLII HHHHHHHHHHHHHHHHHCCCEEEEEHHEEEEEECCCHHHCCCCCHHHHHHHEEEEEEEEE FYDNNGISIDGNVQEWFTDDTAMRFESYGWHVVRNVNGHNRNSVKAAIDQAQSTLDKPSL EECCCCEEECCCHHHHHCCCHHHHHHCCCEEEEECCCCCCCCHHHHHHHHHHHHCCCCCC LICNTIIAFGAPNKSGTHSAHGAPLGAEEVAATRKALNWNEPPFVIPKAIYKSWNATIPG EEHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCEECCHHHHCCCCCCCCC QKKEDNWQQLFHKYQVTYPNLAKELIRRIQRKLPEDWHKKTQKFIENLQMHSQNIATRQA CCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHH SQITIEFFSKELPELFGGSSDLTPSNLTTWSQSSSIMKNPAGNYIHYGVREFGMTAIANG HHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHCCCCCCEEEHHHHHHHHHHHHHH IANYGAFLPYTATFLTFVEYARNAVRMAALMNSHHIMIYTHDSIGLGEDGPTHQPIEQLS HHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCCCHHHHHHH SLRMTPNLIVWRPCDQVETAIAWKSAIEHHGPTALILSRQNLMQQERTSTQINNINRGGY HCCCCCCEEEECCCHHHHHHHHHHHHHHHCCCEEEEEEHHHHHHHHHHHHHHCCCCCCCE ILKDCQNIPELIIIATGSEIILAIQAYYRLTDEGYKIRVISLPSTNIFDQQDKSYREYVL EHHHHCCCCCEEEEECCCCEEEHEEHHHHCCCCCCEEEEEECCCCCCCCCCCHHHHHHCC PSTIINRIAIEASSTDYWYKYVGIYGEIIGMKTFGKSAPSHQLFKFFDFTVDYVINKSYK HHHHHHHHEEEECCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCHH LLKKS HHCCC >Mature Secondary Structure MLSEKILANAIRILSIDAIQKANSGHPGCPMGMADIAEVLWRDYLNHNPNNPNWINRDRF CCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCEE VLSNGHGSMLLYSILHLTGYKISIEDLKNFRQLNSTTPGHPEYGHTDGIEVTTGPLGQGL EEECCCCHHHHHHHHHHCCCEEEHHHHHHHHHHCCCCCCCCCCCCCCCCEEECCCCCHHH ANAVGFAIAERTLAAQFNRAQFNIINHYTYAFLGDGCMMEGISHEACALAGTMKLNKLII HHHHHHHHHHHHHHHHHCCCEEEEEHHEEEEEECCCHHHCCCCCHHHHHHHEEEEEEEEE FYDNNGISIDGNVQEWFTDDTAMRFESYGWHVVRNVNGHNRNSVKAAIDQAQSTLDKPSL EECCCCEEECCCHHHHHCCCHHHHHHCCCEEEEECCCCCCCCHHHHHHHHHHHHCCCCCC LICNTIIAFGAPNKSGTHSAHGAPLGAEEVAATRKALNWNEPPFVIPKAIYKSWNATIPG EEHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCEECCHHHHCCCCCCCCC QKKEDNWQQLFHKYQVTYPNLAKELIRRIQRKLPEDWHKKTQKFIENLQMHSQNIATRQA CCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHH SQITIEFFSKELPELFGGSSDLTPSNLTTWSQSSSIMKNPAGNYIHYGVREFGMTAIANG HHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHCCCCCCEEEHHHHHHHHHHHHHH IANYGAFLPYTATFLTFVEYARNAVRMAALMNSHHIMIYTHDSIGLGEDGPTHQPIEQLS HHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCCCHHHHHHH SLRMTPNLIVWRPCDQVETAIAWKSAIEHHGPTALILSRQNLMQQERTSTQINNINRGGY HCCCCCCEEEECCCHHHHHHHHHHHHHHHCCCEEEEEEHHHHHHHHHHHHHHCCCCCCCE ILKDCQNIPELIIIATGSEIILAIQAYYRLTDEGYKIRVISLPSTNIFDQQDKSYREYVL EHHHHCCCCCEEEEECCCCEEEHEEHHHHCCCCCCEEEEEECCCCCCCCCCCHHHHHHCC PSTIINRIAIEASSTDYWYKYVGIYGEIIGMKTFGKSAPSHQLFKFFDFTVDYVINKSYK HHHHHHHHEEEECCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCHH LLKKS HHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8241274; 9278503; 2153656 [H]