Definition | Candidatus Blochmannia pennsylvanicus str. BPEN, complete genome. |
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Accession | NC_007292 |
Length | 791,654 |
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The map label for this gene is cysK [H]
Identifier: 71892278
GI number: 71892278
Start: 627934
End: 628881
Strand: Direct
Name: cysK [H]
Synonym: BPEN_525
Alternate gene names: 71892278
Gene position: 627934-628881 (Clockwise)
Preceding gene: 71892275
Following gene: 71892279
Centisome position: 79.32
GC content: 35.23
Gene sequence:
>948_bases ATGTATAAAATTTATCAAGATAATTCTTACACTATTGGTCATACTCCATTAGTCCGTCTTAATAATATTGGCAATGGTCA TATTGCTGTTAAAATAGAATCTAGAAATCCTAGCTTTAGCGTTAAATGTCGTATTGGCGCTAATATGATTTGGGATGCAG AAAAAAGAAACTTATTAAAATTAGATACGAGACTTATAGAAGCAACGAGCGGTAATACTGGAATTGCTCTAGCTTACGTA GCGGCCGCGCGACATTATAAATTAACGTTAACCATGCCAGAAACCATGAGCGTTGAACGTCTTAAACTAATTAAAGCTCT AGGAGCCGAAATTATATTGACAGAAGGATGTGATGGAATGAAAGGAGCCATTGCTAAAGCAGAAGAAATTGTTGCTGCTG ATCCTAAACATTATTTATTATTACAACAATTTAGCAATCCTGCAAATCCAGAAATTCATGAAAAAACCACAGGACCTGAA ATTTGGAATGACTCGGACGGACAAATAGATGTATTTGTAGCTGGAGTTGGTACAGGAGGTACTATCACCGGAGTTGGACG ATTTTTCAAACATACCAAAAAAAATAAAAAAATTATTATCGTGGCAGTAGAACCAGAAGAATCTCCAGTCATTACACAGA CGTTATCAGGTCAAAACATAAAACCAGCACCACATAAAATCCAAGGTATTGGTGCTGGTTTTGTTCCAAAAAATCTCGAC TTAACTTTAATTGATCATGTAGAAACAGTAACCATAGATGCAGCTGTTAGCTACGCTAAATATTTAATGGAAAAAGAAGG AATTTTAGCTGGAATTTCTTCAGGCGCCGCATTAGCGGCAGCGGTACAACTACAAAAAAACAAAGCCTATACTGATAAAA ATATAGTAGTTATACTTCCATCGTCTGGTGAACGATATTTAAGTACTGTATTATTTTCAAAGTTATAA
Upstream 100 bases:
>100_bases AAAATTTATATTTTTATTTGATCCAGACTATATATAAAAGATATTCTATACCCCAAACCCATCATTATAGTGATGCATAA CACTTGAGGAATTATTAAAT
Downstream 100 bases:
>100_bases AAATAAATTTTTATTTTCTATTAACATTCAAAAAATAGAAAACATTCATGTACGATGTTTTCTATATTTATTTTTACATA AATAAAAACAATTTGTATAT
Product: cysteine synthase A
Products: NA
Alternate protein names: CSase A; O-acetylserine (thiol)-lyase A; OAS-TL A; O-acetylserine sulfhydrylase A; Sulfate starvation-induced protein 5; SSI5 [H]
Number of amino acids: Translated: 315; Mature: 315
Protein sequence:
>315_residues MYKIYQDNSYTIGHTPLVRLNNIGNGHIAVKIESRNPSFSVKCRIGANMIWDAEKRNLLKLDTRLIEATSGNTGIALAYV AAARHYKLTLTMPETMSVERLKLIKALGAEIILTEGCDGMKGAIAKAEEIVAADPKHYLLLQQFSNPANPEIHEKTTGPE IWNDSDGQIDVFVAGVGTGGTITGVGRFFKHTKKNKKIIIVAVEPEESPVITQTLSGQNIKPAPHKIQGIGAGFVPKNLD LTLIDHVETVTIDAAVSYAKYLMEKEGILAGISSGAALAAAVQLQKNKAYTDKNIVVILPSSGERYLSTVLFSKL
Sequences:
>Translated_315_residues MYKIYQDNSYTIGHTPLVRLNNIGNGHIAVKIESRNPSFSVKCRIGANMIWDAEKRNLLKLDTRLIEATSGNTGIALAYV AAARHYKLTLTMPETMSVERLKLIKALGAEIILTEGCDGMKGAIAKAEEIVAADPKHYLLLQQFSNPANPEIHEKTTGPE IWNDSDGQIDVFVAGVGTGGTITGVGRFFKHTKKNKKIIIVAVEPEESPVITQTLSGQNIKPAPHKIQGIGAGFVPKNLD LTLIDHVETVTIDAAVSYAKYLMEKEGILAGISSGAALAAAVQLQKNKAYTDKNIVVILPSSGERYLSTVLFSKL >Mature_315_residues MYKIYQDNSYTIGHTPLVRLNNIGNGHIAVKIESRNPSFSVKCRIGANMIWDAEKRNLLKLDTRLIEATSGNTGIALAYV AAARHYKLTLTMPETMSVERLKLIKALGAEIILTEGCDGMKGAIAKAEEIVAADPKHYLLLQQFSNPANPEIHEKTTGPE IWNDSDGQIDVFVAGVGTGGTITGVGRFFKHTKKNKKIIIVAVEPEESPVITQTLSGQNIKPAPHKIQGIGAGFVPKNLD LTLIDHVETVTIDAAVSYAKYLMEKEGILAGISSGAALAAAVQLQKNKAYTDKNIVVILPSSGERYLSTVLFSKL
Specific function: Cysteine biosynthesis. [C]
COG id: COG0031
COG function: function code E; Cysteine synthase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the cysteine synthase/cystathionine beta- synthase family [H]
Homologues:
Organism=Homo sapiens, GI295821202, Length=320, Percent_Identity=37.1875, Blast_Score=184, Evalue=1e-46, Organism=Homo sapiens, GI295821200, Length=320, Percent_Identity=37.1875, Blast_Score=184, Evalue=1e-46, Organism=Homo sapiens, GI4557415, Length=320, Percent_Identity=37.1875, Blast_Score=184, Evalue=1e-46, Organism=Escherichia coli, GI1788754, Length=315, Percent_Identity=73.968253968254, Blast_Score=463, Evalue=1e-132, Organism=Escherichia coli, GI2367138, Length=307, Percent_Identity=42.3452768729642, Blast_Score=208, Evalue=4e-55, Organism=Caenorhabditis elegans, GI17535051, Length=308, Percent_Identity=51.9480519480519, Blast_Score=281, Evalue=4e-76, Organism=Caenorhabditis elegans, GI17562970, Length=316, Percent_Identity=46.8354430379747, Blast_Score=260, Evalue=5e-70, Organism=Caenorhabditis elegans, GI32566674, Length=308, Percent_Identity=47.4025974025974, Blast_Score=256, Evalue=1e-68, Organism=Caenorhabditis elegans, GI115535073, Length=317, Percent_Identity=48.8958990536278, Blast_Score=238, Evalue=2e-63, Organism=Caenorhabditis elegans, GI17561720, Length=316, Percent_Identity=46.2025316455696, Blast_Score=227, Evalue=6e-60, Organism=Caenorhabditis elegans, GI32566672, Length=224, Percent_Identity=45.5357142857143, Blast_Score=188, Evalue=3e-48, Organism=Caenorhabditis elegans, GI17534315, Length=320, Percent_Identity=37.5, Blast_Score=138, Evalue=3e-33, Organism=Caenorhabditis elegans, GI25147552, Length=313, Percent_Identity=34.8242811501597, Blast_Score=119, Evalue=1e-27, Organism=Caenorhabditis elegans, GI17561716, Length=129, Percent_Identity=41.0852713178295, Blast_Score=81, Evalue=6e-16, Organism=Saccharomyces cerevisiae, GI6321594, Length=314, Percent_Identity=36.3057324840764, Blast_Score=159, Evalue=7e-40, Organism=Saccharomyces cerevisiae, GI6321449, Length=335, Percent_Identity=31.044776119403, Blast_Score=112, Evalue=6e-26, Organism=Drosophila melanogaster, GI24643623, Length=305, Percent_Identity=36.0655737704918, Blast_Score=145, Evalue=5e-35, Organism=Drosophila melanogaster, GI20129101, Length=305, Percent_Identity=36.0655737704918, Blast_Score=145, Evalue=5e-35,
Paralogues:
None
Copy number: 2820 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 240 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001216 - InterPro: IPR005856 - InterPro: IPR005859 - InterPro: IPR001926 [H]
Pfam domain/function: PF00291 PALP [H]
EC number: =2.5.1.47 [H]
Molecular weight: Translated: 34107; Mature: 34107
Theoretical pI: Translated: 9.15; Mature: 9.15
Prosite motif: PS00901 CYS_SYNTHASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MYKIYQDNSYTIGHTPLVRLNNIGNGHIAVKIESRNPSFSVKCRIGANMIWDAEKRNLLK CEEEEECCCEEECCCCEEEEECCCCCEEEEEEECCCCCEEEEEEECCCEEEECCCCCEEE LDTRLIEATSGNTGIALAYVAAARHYKLTLTMPETMSVERLKLIKALGAEIILTEGCDGM EEEEEEEECCCCCCEEEEEEEECCEEEEEEECCCCCCHHHHHHHHHCCCEEEEECCCCCC KGAIAKAEEIVAADPKHYLLLQQFSNPANPEIHEKTTGPEIWNDSDGQIDVFVAGVGTGG HHHHHHHHHHEECCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEECCCC TITGVGRFFKHTKKNKKIIIVAVEPEESPVITQTLSGQNIKPAPHKIQGIGAGFVPKNLD CHHHHHHHHHHCCCCCEEEEEEECCCCCCEEEEECCCCCCCCCCCEEEECCCCCCCCCCC LTLIDHVETVTIDAAVSYAKYLMEKEGILAGISSGAALAAAVQLQKNKAYTDKNIVVILP EEEECCEEEEEEHHHHHHHHHHHHCCCEEEECCCCCEEEEEEEEECCCCCCCCCEEEEEC SSGERYLSTVLFSKL CCCHHHHHHHHHHCC >Mature Secondary Structure MYKIYQDNSYTIGHTPLVRLNNIGNGHIAVKIESRNPSFSVKCRIGANMIWDAEKRNLLK CEEEEECCCEEECCCCEEEEECCCCCEEEEEEECCCCCEEEEEEECCCEEEECCCCCEEE LDTRLIEATSGNTGIALAYVAAARHYKLTLTMPETMSVERLKLIKALGAEIILTEGCDGM EEEEEEEECCCCCCEEEEEEEECCEEEEEEECCCCCCHHHHHHHHHCCCEEEEECCCCCC KGAIAKAEEIVAADPKHYLLLQQFSNPANPEIHEKTTGPEIWNDSDGQIDVFVAGVGTGG HHHHHHHHHHEECCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEECCCC TITGVGRFFKHTKKNKKIIIVAVEPEESPVITQTLSGQNIKPAPHKIQGIGAGFVPKNLD CHHHHHHHHHHCCCCCEEEEEEECCCCCCEEEEECCCCCCCCCCCEEEECCCCCCCCCCC LTLIDHVETVTIDAAVSYAKYLMEKEGILAGISSGAALAAAVQLQKNKAYTDKNIVVILP EEEECCEEEEEEHHHHHHHHHHHHCCCEEEECCCCCEEEEEEEEECCCCCCCCCEEEEEC SSGERYLSTVLFSKL CCCHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]