Definition | Candidatus Blochmannia pennsylvanicus str. BPEN, complete genome. |
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Accession | NC_007292 |
Length | 791,654 |
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The map label for this gene is metG
Identifier: 71892244
GI number: 71892244
Start: 579039
End: 580706
Strand: Direct
Name: metG
Synonym: BPEN_486
Alternate gene names: 71892244
Gene position: 579039-580706 (Clockwise)
Preceding gene: 71892242
Following gene: 71892246
Centisome position: 73.14
GC content: 31.83
Gene sequence:
>1668_bases ATGACTACAAAAAAAATGCTAGTTACTTGTGCCTTGCCTTACGCTAATGGTTCACTTCATATTGGACACATGTTAGAACA TATACAAGCAGATATCTGGGTTCGTTATCAACGCATGCAAGGAAATTGCGTATACTTTATTTGCGCAGATGATGCGCATG GAACTGCCATTATGTTAAAATCACAACAACTTAATATAGCTCCAGAACAAATGATTGCCCAAATACGACAAGAACATCAA CGAGATTGCTATAAATTCGGAATTAGCTATGATAACTACTATTCTACTCACAGTGACGAAACTCGTGAATTACTGCATGA CATTTACTCTCGATTAAACACACGTGGATTCATCAAATCTAAATTTATTTCTCAATTATATGATTCTAAAAAAAATATGT TTTTACCGGATCGATTTGTTAAAGGCATATGTCCAAAATGCAAAAAAGATGATCAATATGGAGATAATTGTGCAGCATGT GGTACTATCTATACCTCTTTAGAGCTTATAAACCCCAAATCAGTTATTTCTGGAACGTCTCCGATAATACGCAAGTCTGA ACATCTCTTTTTTGATTTACCAGCTTTTACTGATACATTGCGTACATGGATTCGATCAGGAAGCATACAAAAAGAAGTAG CTAACAAAGTAGAAGAATGGTTTAAATTAGGTTTAAAAAAATGGGATATTTCTAGAGACGCTCCTTATTTTGGATTTAAA ATTCCTAATTCTTCAGAAAAATATTTTTATGTATGGATGGATGCCCCTGTCGGATATATGGGTACCTTTAAAAACCTATG CAAAAAAAACAAAAACATATCTTTTAACGACTTTTGGGGATCAAATTCCAAAACTGACTTATATCATTTCATAGGTAAAG ATATTATTTACTTTCATTGTTTATTTTGGCCAGCTGTTTTGTCAGGTAGTCAATTTCGAAAACCAACTAATATATTTGTT CATGGGCATGTTACTTTAAATGGATCTAAAATATCAAAATCTAAAGGGACTTGCATCAACGTAAGTACTTACTTATCATG TTTAAACCCAGATTATTTAAGATATTATTATGCCACGAAGCTTTCATCTCATGCTAACGACATAGACTTGAATTTATCAG ATTTTATTACTAGAGTAAATTCGGATATTATTAATAAAATATTAAATTTAGCATCTAGAAATTCTGGATTTATACATCAA TATTATAATGGCCATTTGTCGAATACATTAACACATCCACTTATATATAATATGTTTATTGAATCCAGACATTATATAGG AAAATTATTTCAAAAAAGAGAATTTAACTACGCAATGCGTGAAATTATGAAATTAGCAGATGAAGCTAATCGTTACATAG ATAAACATGCTCCGTGGCATATCGCAAAAAAAATAGACCGTAGACAAGAGGCATTATCTATTTATTCTATGGGTATTCAG TTGTTTCGTGTGCTGATGATCTATTTGAAACCTGTCTTACCTAAATTAGCTAATTATAGCGAATGTTTTCTCAACACTCG TCTTACATGGGGCAGTCTTTCTGCGCCTTTATCAAATCATCGAATTAATAAATTCAAAATAATTTTTTCTCGAATCCATC CCGATCAAATTGCATCTATGACAAATAAATCTCAATTACATGAGCGCCTTACGGATAATAATGTATGA
Upstream 100 bases:
>100_bases TGTATATTCATGATGTAAATTATAAAAAACAATTACATTTTAACAATTACAGTATATGTCGTCATACGACATATTTAAAT TTTAAATCCACAAAACTATT
Downstream 100 bases:
>100_bases AGAGCACAAATCACACTCTTTAACAATAAACATAATATAACGTTAAAACAACTAACTGTATCATTGCATACGCTACACAA TGGAAACTGTACAGGAATTG
Product: methionyl-tRNA synthetase
Products: NA
Alternate protein names: Methionine--tRNA ligase; MetRS
Number of amino acids: Translated: 555; Mature: 554
Protein sequence:
>555_residues MTTKKMLVTCALPYANGSLHIGHMLEHIQADIWVRYQRMQGNCVYFICADDAHGTAIMLKSQQLNIAPEQMIAQIRQEHQ RDCYKFGISYDNYYSTHSDETRELLHDIYSRLNTRGFIKSKFISQLYDSKKNMFLPDRFVKGICPKCKKDDQYGDNCAAC GTIYTSLELINPKSVISGTSPIIRKSEHLFFDLPAFTDTLRTWIRSGSIQKEVANKVEEWFKLGLKKWDISRDAPYFGFK IPNSSEKYFYVWMDAPVGYMGTFKNLCKKNKNISFNDFWGSNSKTDLYHFIGKDIIYFHCLFWPAVLSGSQFRKPTNIFV HGHVTLNGSKISKSKGTCINVSTYLSCLNPDYLRYYYATKLSSHANDIDLNLSDFITRVNSDIINKILNLASRNSGFIHQ YYNGHLSNTLTHPLIYNMFIESRHYIGKLFQKREFNYAMREIMKLADEANRYIDKHAPWHIAKKIDRRQEALSIYSMGIQ LFRVLMIYLKPVLPKLANYSECFLNTRLTWGSLSAPLSNHRINKFKIIFSRIHPDQIASMTNKSQLHERLTDNNV
Sequences:
>Translated_555_residues MTTKKMLVTCALPYANGSLHIGHMLEHIQADIWVRYQRMQGNCVYFICADDAHGTAIMLKSQQLNIAPEQMIAQIRQEHQ RDCYKFGISYDNYYSTHSDETRELLHDIYSRLNTRGFIKSKFISQLYDSKKNMFLPDRFVKGICPKCKKDDQYGDNCAAC GTIYTSLELINPKSVISGTSPIIRKSEHLFFDLPAFTDTLRTWIRSGSIQKEVANKVEEWFKLGLKKWDISRDAPYFGFK IPNSSEKYFYVWMDAPVGYMGTFKNLCKKNKNISFNDFWGSNSKTDLYHFIGKDIIYFHCLFWPAVLSGSQFRKPTNIFV HGHVTLNGSKISKSKGTCINVSTYLSCLNPDYLRYYYATKLSSHANDIDLNLSDFITRVNSDIINKILNLASRNSGFIHQ YYNGHLSNTLTHPLIYNMFIESRHYIGKLFQKREFNYAMREIMKLADEANRYIDKHAPWHIAKKIDRRQEALSIYSMGIQ LFRVLMIYLKPVLPKLANYSECFLNTRLTWGSLSAPLSNHRINKFKIIFSRIHPDQIASMTNKSQLHERLTDNNV >Mature_554_residues TTKKMLVTCALPYANGSLHIGHMLEHIQADIWVRYQRMQGNCVYFICADDAHGTAIMLKSQQLNIAPEQMIAQIRQEHQR DCYKFGISYDNYYSTHSDETRELLHDIYSRLNTRGFIKSKFISQLYDSKKNMFLPDRFVKGICPKCKKDDQYGDNCAACG TIYTSLELINPKSVISGTSPIIRKSEHLFFDLPAFTDTLRTWIRSGSIQKEVANKVEEWFKLGLKKWDISRDAPYFGFKI PNSSEKYFYVWMDAPVGYMGTFKNLCKKNKNISFNDFWGSNSKTDLYHFIGKDIIYFHCLFWPAVLSGSQFRKPTNIFVH GHVTLNGSKISKSKGTCINVSTYLSCLNPDYLRYYYATKLSSHANDIDLNLSDFITRVNSDIINKILNLASRNSGFIHQY YNGHLSNTLTHPLIYNMFIESRHYIGKLFQKREFNYAMREIMKLADEANRYIDKHAPWHIAKKIDRRQEALSIYSMGIQL FRVLMIYLKPVLPKLANYSECFLNTRLTWGSLSAPLSNHRINKFKIIFSRIHPDQIASMTNKSQLHERLTDNNV
Specific function: Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
COG id: COG0143
COG function: function code J; Methionyl-tRNA synthetase
Gene ontology:
Cell location: Cytoplasm
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the class-I aminoacyl-tRNA synthetase family. MetG type 1 subfamily
Homologues:
Organism=Homo sapiens, GI14043022, Length=563, Percent_Identity=26.6429840142096, Blast_Score=240, Evalue=3e-63, Organism=Homo sapiens, GI24308436, Length=521, Percent_Identity=24.3761996161228, Blast_Score=149, Evalue=9e-36, Organism=Escherichia coli, GI1788432, Length=545, Percent_Identity=61.4678899082569, Blast_Score=756, Evalue=0.0, Organism=Caenorhabditis elegans, GI17540794, Length=574, Percent_Identity=25.7839721254355, Blast_Score=219, Evalue=2e-57, Organism=Caenorhabditis elegans, GI212645096, Length=517, Percent_Identity=23.7911025145068, Blast_Score=138, Evalue=6e-33, Organism=Caenorhabditis elegans, GI71992781, Length=337, Percent_Identity=25.5192878338279, Blast_Score=107, Evalue=1e-23, Organism=Saccharomyces cerevisiae, GI6321704, Length=563, Percent_Identity=27.1758436944938, Blast_Score=221, Evalue=2e-58, Organism=Saccharomyces cerevisiae, GI6321610, Length=545, Percent_Identity=22.5688073394495, Blast_Score=101, Evalue=4e-22, Organism=Drosophila melanogaster, GI24655311, Length=563, Percent_Identity=27.5310834813499, Blast_Score=228, Evalue=1e-59, Organism=Drosophila melanogaster, GI21358483, Length=521, Percent_Identity=25.7197696737044, Blast_Score=133, Evalue=4e-31,
Paralogues:
None
Copy number: 871 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. [C]
Swissprot (AC and ID): SYM_BLOPB (Q492J8)
Other databases:
- EMBL: CP000016 - RefSeq: YP_277978.1 - ProteinModelPortal: Q492J8 - SMR: Q492J8 - STRING: Q492J8 - GeneID: 3562993 - GenomeReviews: CP000016_GR - KEGG: bpn:BPEN_486 - eggNOG: COG0143 - HOGENOM: HBG721667 - OMA: CGNQLDP - ProtClustDB: PRK12268 - BioCyc: CBLO291272:BPEN_486-MONOMER - GO: GO:0005737 - HAMAP: MF_00098 - InterPro: IPR001412 - InterPro: IPR015413 - InterPro: IPR014758 - InterPro: IPR014729 - InterPro: IPR009080 - Gene3D: G3DSA:3.40.50.620 - PRINTS: PR01041 - TIGRFAMs: TIGR00398
Pfam domain/function: PF09334 tRNA-synt_1g; SSF47323 tRNAsyn_1a_bind
EC number: =6.1.1.10
Molecular weight: Translated: 64542; Mature: 64411
Theoretical pI: Translated: 9.60; Mature: 9.60
Prosite motif: PS00178 AA_TRNA_LIGASE_I
Important sites: BINDING 333-333
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTKKMLVTCALPYANGSLHIGHMLEHIQADIWVRYQRMQGNCVYFICADDAHGTAIMLK CCCCEEEEEEEEECCCCCEEHHHHHHHHHHHHHEEEEEECCCEEEEEECCCCCCCEEEEE SQQLNIAPEQMIAQIRQEHQRDCYKFGISYDNYYSTHSDETRELLHDIYSRLNTRGFIKS CCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHH KFISQLYDSKKNMFLPDRFVKGICPKCKKDDQYGDNCAACGTIYTSLELINPKSVISGTS HHHHHHHHCCCCCCCCHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHEECCCHHHHCCCC PIIRKSEHLFFDLPAFTDTLRTWIRSGSIQKEVANKVEEWFKLGLKKWDISRDAPYFGFK HHHCCCCCEEEECHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCHHCCCCCCCCEEEEE IPNSSEKYFYVWMDAPVGYMGTFKNLCKKNKNISFNDFWGSNSKTDLYHFIGKDIIYFHC CCCCCCCEEEEEECCCCCHHHHHHHHHHCCCCCCEECCCCCCCCCHHHHHHHHHHHHHHH LFWPAVLSGSQFRKPTNIFVHGHVTLNGSKISKSKGTCINVSTYLSCLNPDYLRYYYATK HHHHHHHCCCCCCCCCEEEEEEEEEECCCEECCCCCCEEEHHHHHHHCCCHHHHHHHHHH LSSHANDIDLNLSDFITRVNSDIINKILNLASRNSGFIHQYYNGHLSNTLTHPLIYNMFI HCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCEEHHHCCHHHHHHHHHHHHHHHH ESRHYIGKLFQKREFNYAMREIMKLADEANRYIDKHAPWHIAKKIDRRQEALSIYSMGIQ HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHH LFRVLMIYLKPVLPKLANYSECFLNTRLTWGSLSAPLSNHRINKFKIIFSRIHPDQIASM HHHHHHHHHHHHHHHHCCCHHHHHHCCCCCCCCCCCCCCCCCHHEEEEHHHCCHHHHHHH TNKSQLHERLTDNNV HHHHHHHHHHCCCCC >Mature Secondary Structure TTKKMLVTCALPYANGSLHIGHMLEHIQADIWVRYQRMQGNCVYFICADDAHGTAIMLK CCCEEEEEEEEECCCCCEEHHHHHHHHHHHHHEEEEEECCCEEEEEECCCCCCCEEEEE SQQLNIAPEQMIAQIRQEHQRDCYKFGISYDNYYSTHSDETRELLHDIYSRLNTRGFIKS CCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHH KFISQLYDSKKNMFLPDRFVKGICPKCKKDDQYGDNCAACGTIYTSLELINPKSVISGTS HHHHHHHHCCCCCCCCHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHEECCCHHHHCCCC PIIRKSEHLFFDLPAFTDTLRTWIRSGSIQKEVANKVEEWFKLGLKKWDISRDAPYFGFK HHHCCCCCEEEECHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCHHCCCCCCCCEEEEE IPNSSEKYFYVWMDAPVGYMGTFKNLCKKNKNISFNDFWGSNSKTDLYHFIGKDIIYFHC CCCCCCCEEEEEECCCCCHHHHHHHHHHCCCCCCEECCCCCCCCCHHHHHHHHHHHHHHH LFWPAVLSGSQFRKPTNIFVHGHVTLNGSKISKSKGTCINVSTYLSCLNPDYLRYYYATK HHHHHHHCCCCCCCCCEEEEEEEEEECCCEECCCCCCEEEHHHHHHHCCCHHHHHHHHHH LSSHANDIDLNLSDFITRVNSDIINKILNLASRNSGFIHQYYNGHLSNTLTHPLIYNMFI HCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCEEHHHCCHHHHHHHHHHHHHHHH ESRHYIGKLFQKREFNYAMREIMKLADEANRYIDKHAPWHIAKKIDRRQEALSIYSMGIQ HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHH LFRVLMIYLKPVLPKLANYSECFLNTRLTWGSLSAPLSNHRINKFKIIFSRIHPDQIASM HHHHHHHHHHHHHHHHCCCHHHHHHCCCCCCCCCCCCCCCCCHHEEEEHHHCCHHHHHHH TNKSQLHERLTDNNV HHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA