Definition | Candidatus Blochmannia pennsylvanicus str. BPEN, complete genome. |
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Accession | NC_007292 |
Length | 791,654 |
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The map label for this gene is aspC [H]
Identifier: 71892196
GI number: 71892196
Start: 510328
End: 511533
Strand: Direct
Name: aspC [H]
Synonym: BPEN_434
Alternate gene names: 71892196
Gene position: 510328-511533 (Clockwise)
Preceding gene: 71892195
Following gene: 71892199
Centisome position: 64.46
GC content: 31.01
Gene sequence:
>1206_bases ATGTTTAAATCTATTAAAATGGCACCTGATGATCCAATTCTTGGTTTATCAGAAATTTATGATGCTGATGAACGAAAAAA TAAAATTAATCTAGGAATAGGAGTATATATCGATAAACTGAAAAATACTCCTGTTTTAACTAGCGTCAAACAAGCTGAGG AATGGTTATTAAAACATGAAATCAGTAAAAATTATCTTAGCATAGAGGGTTTACATTCCTTTAATACTGCAACTCAATAT TTATTATTTGGAACAGATGATAATTCTATCATTTCAAAAAAACGTATGCGAACTGTTCAAGCTCCTGGAGGGACTGGTGC GTTACGTATTGCAGCTGAATTTATAGTAAAAAATACTAATTCTAAACGCATATGGATTAGTTCTCCTACTTGGATTAATC ATAGAAATATTTTCCTTGCTGCAGGATTAAAAGTATATACTTATCCTTATTATAATAGTGTAACTAATTCACTAAATTTT AATGAACTATATTCAAGTTTGAAAGACGTTAATCCTAATGATGTCGTATTATTCCATTGTTGCTGTCATAATCCTACAGG AATTGACCCTAACGCTGAACAATGGGATATACTATCGGAATTATCAGCTAAAAAACAATGGCTACCTTTATTTGATCTAG CTTATCAAGGATTTTCGCGTGGTTTACAAGAAGATCTTGAAGGTTTATATATTTTCTGTAAAAAAAATTCAGAGTTGATA GTATGTAATTCTTATTCAAAAAACTTCGGTTTATATAATGAACGGATAGGGGCGTGCACTGTAATCACTAATAATAATAA AGATGCTGAACACGCATTAAGTCAATTACGCGTTATTATTCGCGGCAATTATTCTAATCCACCAGCTCATGGAGCATCCG TTGTATCTTTGATATTAAATAACAAAACTTTGCGATCTACATGGGAAACAGAACTCAAAAACATGCGAGAAAGCATCAAT CATATGAGAAAATTATTTGCAGACACTTTGCAAACTAATGACAAAAATAGAGATTTCAGTTTTATTGAGCGACAATGTGG TATGTTTTCTTTTATGGGTTTAAATGAAAATCAAGTGATAAGATTAAGAAATCAATTTGGTATTTACCTAGTAGGAGCGG GTAGAATTAATTTATCTGGGTTATCAGACGACAACATCAATTATGTCAGCAATTCTATAATTAAAACTTTACATACAACA GCATAA
Upstream 100 bases:
>100_bases TATTAAAATTGAAAATTTCAATATAAATAATTGGAAAAACATAATAGTTTTTGATATAAATAAAATATTCTGCATATTAT AATAAATACGGATGCATGTT
Downstream 100 bases:
>100_bases CCATCTTATCACCAAGATGGTTGGTGGATATTTAATGCATTTATTTTAATTAAAATAAATGCATTAAATATTTATAAAAC ACAAACAATAAATCGACGTA
Product: aromatic amino acid aminotransferase
Products: NA
Alternate protein names: AspAT; Transaminase A [H]
Number of amino acids: Translated: 401; Mature: 401
Protein sequence:
>401_residues MFKSIKMAPDDPILGLSEIYDADERKNKINLGIGVYIDKLKNTPVLTSVKQAEEWLLKHEISKNYLSIEGLHSFNTATQY LLFGTDDNSIISKKRMRTVQAPGGTGALRIAAEFIVKNTNSKRIWISSPTWINHRNIFLAAGLKVYTYPYYNSVTNSLNF NELYSSLKDVNPNDVVLFHCCCHNPTGIDPNAEQWDILSELSAKKQWLPLFDLAYQGFSRGLQEDLEGLYIFCKKNSELI VCNSYSKNFGLYNERIGACTVITNNNKDAEHALSQLRVIIRGNYSNPPAHGASVVSLILNNKTLRSTWETELKNMRESIN HMRKLFADTLQTNDKNRDFSFIERQCGMFSFMGLNENQVIRLRNQFGIYLVGAGRINLSGLSDDNINYVSNSIIKTLHTT A
Sequences:
>Translated_401_residues MFKSIKMAPDDPILGLSEIYDADERKNKINLGIGVYIDKLKNTPVLTSVKQAEEWLLKHEISKNYLSIEGLHSFNTATQY LLFGTDDNSIISKKRMRTVQAPGGTGALRIAAEFIVKNTNSKRIWISSPTWINHRNIFLAAGLKVYTYPYYNSVTNSLNF NELYSSLKDVNPNDVVLFHCCCHNPTGIDPNAEQWDILSELSAKKQWLPLFDLAYQGFSRGLQEDLEGLYIFCKKNSELI VCNSYSKNFGLYNERIGACTVITNNNKDAEHALSQLRVIIRGNYSNPPAHGASVVSLILNNKTLRSTWETELKNMRESIN HMRKLFADTLQTNDKNRDFSFIERQCGMFSFMGLNENQVIRLRNQFGIYLVGAGRINLSGLSDDNINYVSNSIIKTLHTT A >Mature_401_residues MFKSIKMAPDDPILGLSEIYDADERKNKINLGIGVYIDKLKNTPVLTSVKQAEEWLLKHEISKNYLSIEGLHSFNTATQY LLFGTDDNSIISKKRMRTVQAPGGTGALRIAAEFIVKNTNSKRIWISSPTWINHRNIFLAAGLKVYTYPYYNSVTNSLNF NELYSSLKDVNPNDVVLFHCCCHNPTGIDPNAEQWDILSELSAKKQWLPLFDLAYQGFSRGLQEDLEGLYIFCKKNSELI VCNSYSKNFGLYNERIGACTVITNNNKDAEHALSQLRVIIRGNYSNPPAHGASVVSLILNNKTLRSTWETELKNMRESIN HMRKLFADTLQTNDKNRDFSFIERQCGMFSFMGLNENQVIRLRNQFGIYLVGAGRINLSGLSDDNINYVSNSIIKTLHTT A
Specific function: Unknown
COG id: COG1448
COG function: function code E; Aspartate/tyrosine/aromatic aminotransferase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the class-I pyridoxal-phosphate-dependent aminotransferase family [H]
Homologues:
Organism=Homo sapiens, GI73486658, Length=391, Percent_Identity=37.3401534526854, Blast_Score=291, Evalue=9e-79, Organism=Homo sapiens, GI4504067, Length=401, Percent_Identity=37.6558603491272, Blast_Score=266, Evalue=2e-71, Organism=Homo sapiens, GI117414139, Length=386, Percent_Identity=29.5336787564767, Blast_Score=150, Evalue=2e-36, Organism=Escherichia coli, GI1787159, Length=397, Percent_Identity=56.4231738035265, Blast_Score=499, Evalue=1e-142, Organism=Escherichia coli, GI1790488, Length=398, Percent_Identity=38.4422110552764, Blast_Score=325, Evalue=4e-90, Organism=Caenorhabditis elegans, GI71981858, Length=393, Percent_Identity=37.6590330788804, Blast_Score=306, Evalue=1e-83, Organism=Caenorhabditis elegans, GI25147133, Length=390, Percent_Identity=37.1794871794872, Blast_Score=295, Evalue=3e-80, Organism=Caenorhabditis elegans, GI17569539, Length=404, Percent_Identity=34.9009900990099, Blast_Score=249, Evalue=1e-66, Organism=Caenorhabditis elegans, GI17569537, Length=402, Percent_Identity=31.3432835820896, Blast_Score=181, Evalue=6e-46, Organism=Caenorhabditis elegans, GI25147136, Length=209, Percent_Identity=37.799043062201, Blast_Score=158, Evalue=4e-39, Organism=Caenorhabditis elegans, GI17550384, Length=270, Percent_Identity=31.4814814814815, Blast_Score=145, Evalue=3e-35, Organism=Saccharomyces cerevisiae, GI6323055, Length=403, Percent_Identity=37.9652605459057, Blast_Score=276, Evalue=6e-75, Organism=Saccharomyces cerevisiae, GI6322743, Length=426, Percent_Identity=33.5680751173709, Blast_Score=224, Evalue=2e-59, Organism=Drosophila melanogaster, GI24580970, Length=397, Percent_Identity=38.5390428211587, Blast_Score=295, Evalue=5e-80, Organism=Drosophila melanogaster, GI24580972, Length=397, Percent_Identity=38.5390428211587, Blast_Score=295, Evalue=5e-80, Organism=Drosophila melanogaster, GI19920542, Length=392, Percent_Identity=38.7755102040816, Blast_Score=291, Evalue=6e-79, Organism=Drosophila melanogaster, GI19922362, Length=396, Percent_Identity=38.6363636363636, Blast_Score=289, Evalue=3e-78, Organism=Drosophila melanogaster, GI24654046, Length=396, Percent_Identity=38.6363636363636, Blast_Score=289, Evalue=3e-78,
Paralogues:
None
Copy number: 6,000 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004839 - InterPro: IPR000796 - InterPro: IPR004838 - InterPro: IPR015424 - InterPro: IPR015421 [H]
Pfam domain/function: PF00155 Aminotran_1_2 [H]
EC number: =2.6.1.1 [H]
Molecular weight: Translated: 45477; Mature: 45477
Theoretical pI: Translated: 8.60; Mature: 8.60
Prosite motif: PS00105 AA_TRANSFER_CLASS_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFKSIKMAPDDPILGLSEIYDADERKNKINLGIGVYIDKLKNTPVLTSVKQAEEWLLKHE CCCCCCCCCCCCCCCHHHHHCCHHCCCEEEEEEEEEEECCCCCCHHHHHHHHHHHHHHHH ISKNYLSIEGLHSFNTATQYLLFGTDDNSIISKKRMRTVQAPGGTGALRIAAEFIVKNTN HCCCEEEEECCCCCCCCEEEEEEECCCCHHHHHHHHHEEECCCCCCHHHHEEEHHHCCCC SKRIWISSPTWINHRNIFLAAGLKVYTYPYYNSVTNSLNFNELYSSLKDVNPNDVVLFHC CCEEEEECCCEECCCCEEEEECEEEEEECCHHHHHCCCCHHHHHHHHHCCCCCCEEEEEE CCHNPTGIDPNAEQWDILSELSAKKQWLPLFDLAYQGFSRGLQEDLEGLYIFCKKNSELI ECCCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCEEEEEEECCCCEE VCNSYSKNFGLYNERIGACTVITNNNKDAEHALSQLRVIIRGNYSNPPAHGASVVSLILN EECCCCCCCCCCCCCCCEEEEEECCCCCHHHHHHHEEEEEECCCCCCCCCHHHHHHHHHC NKTLRSTWETELKNMRESINHMRKLFADTLQTNDKNRDFSFIERQCGMFSFMGLNENQVI CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHCCEEEEECCCCCCEE RLRNQFGIYLVGAGRINLSGLSDDNINYVSNSIIKTLHTTA EEECCCCEEEEEECEEEECCCCCCCCHHHHHHHHHHHHCCC >Mature Secondary Structure MFKSIKMAPDDPILGLSEIYDADERKNKINLGIGVYIDKLKNTPVLTSVKQAEEWLLKHE CCCCCCCCCCCCCCCHHHHHCCHHCCCEEEEEEEEEEECCCCCCHHHHHHHHHHHHHHHH ISKNYLSIEGLHSFNTATQYLLFGTDDNSIISKKRMRTVQAPGGTGALRIAAEFIVKNTN HCCCEEEEECCCCCCCCEEEEEEECCCCHHHHHHHHHEEECCCCCCHHHHEEEHHHCCCC SKRIWISSPTWINHRNIFLAAGLKVYTYPYYNSVTNSLNFNELYSSLKDVNPNDVVLFHC CCEEEEECCCEECCCCEEEEECEEEEEECCHHHHHCCCCHHHHHHHHHCCCCCCEEEEEE CCHNPTGIDPNAEQWDILSELSAKKQWLPLFDLAYQGFSRGLQEDLEGLYIFCKKNSELI ECCCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCEEEEEEECCCCEE VCNSYSKNFGLYNERIGACTVITNNNKDAEHALSQLRVIIRGNYSNPPAHGASVVSLILN EECCCCCCCCCCCCCCCEEEEEECCCCCHHHHHHHEEEEEECCCCCCCCCHHHHHHHHHC NKTLRSTWETELKNMRESINHMRKLFADTLQTNDKNRDFSFIERQCGMFSFMGLNENQVI CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHCCEEEEECCCCCCEE RLRNQFGIYLVGAGRINLSGLSDDNINYVSNSIIKTLHTTA EEECCCCEEEEEECEEEECCCCCCCCHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 6378205; 3897210; 3521591; 3298240; 8905232; 9278503; 9298646; 1868057; 2007566; 2513875; 1993208; 9891001 [H]