Definition Candidatus Blochmannia pennsylvanicus str. BPEN, complete genome.
Accession NC_007292
Length 791,654

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The map label for this gene is ybhE

Identifier: 71892119

GI number: 71892119

Start: 415746

End: 416759

Strand: Reverse

Name: ybhE

Synonym: BPEN_351

Alternate gene names: 71892119

Gene position: 416759-415746 (Counterclockwise)

Preceding gene: 71892122

Following gene: 71892402

Centisome position: 52.64

GC content: 33.63

Gene sequence:

>1014_bases
ATGATACAAATTATTTATGTAGCGAGCCCGGAAAGTCAGCAAATTCACGTTTGGAAATTAGATAGTATTTATGGGCTACT
AGAATTAATACAGGTGATATATACTCACGGACAGGCACAACCTATGGCTGTGCATCCTAATAAGCGATTTTTGTATGTTG
GAATACGTCCCAATTTTGGAATTACTACTTATCGTATCGATCAGATAGGTTTGTTAGCGGATCATGGGACAATTGGGATC
TTCAGTAGCCCCACTCATTTGATTAGCGACAAAAAGGGTGCGTTTTTGTATTGCACATCTTATAGAAATAACACGGTGAG
TGTGATTCCTATAAGTATGTCAGGAATGCTTCTTGATAGCCCTATACAAATTATAGAAGGCCTGTTAGGGTGTCATTCCG
CAAATATAGATAAATTCAAAAAATTACTTTGGGTTCCTTGTTTGAAGGAAAATGCTATTAGGTTATTTAACATAAATTCG
TTTGGAATGTTGACATCATACGATCCATCTATTATTAAAATTAATGTTGGTTCTGGTCCGCGTCATATGATTTTCTGTGA
TTTCGATTGTTACGCATATGTCATTAATGAATTAACGAGTACTGTTGATGTTATAAAATATAATAATTTTCAAAAAATTC
CAAGTATCGTTCAAACAGTAAGTATAATTCCTAAAAATATCAGCATTAACCGATGTTGGGCAGCTGATATACATATCACT
CCTAATGGGCGTTGGTTATATTGTACTGATAGATCTATTAATATTATTAGTTGTTTGGAGATCTCTAAAAAGACAAAAAA
ATTAAAATTTGTTGGTTATCAACTCACTGAAGAACAGCCGCGTGGTTTTGCAATTGATTATCAGGGAAAATTTTTAGTGG
TCGCAGGTCAAAAATCAAATTGTATCTCTTTATATAAGATTGATTCAGATAATGGAACATTAACTATGTTGTCTCGTTAT
TCATCAGGAAAGGGTCCTATGTGGGTTAGTATTATTACGTTGAATTGCAAATGA

Upstream 100 bases:

>100_bases
AAAAATTAAAATAGGTTTGTAGTCCCATACTGAAATACGGTCACATACAGTATGATTTTTTATTTATATTTAATTACATT
GTTATAAAACGAATAAATAT

Downstream 100 bases:

>100_bases
GTATACAACAAAATCATTCATTCTTACACGATGATGGTCATGTAAAGCATAATTTTTTATAAGTATGATTTTTTATGTAC
TTATAAATTAATAGTAAATT

Product: 6-phosphogluconolactonase

Products: NA

Alternate protein names: 6-P-gluconolactonase

Number of amino acids: Translated: 337; Mature: 337

Protein sequence:

>337_residues
MIQIIYVASPESQQIHVWKLDSIYGLLELIQVIYTHGQAQPMAVHPNKRFLYVGIRPNFGITTYRIDQIGLLADHGTIGI
FSSPTHLISDKKGAFLYCTSYRNNTVSVIPISMSGMLLDSPIQIIEGLLGCHSANIDKFKKLLWVPCLKENAIRLFNINS
FGMLTSYDPSIIKINVGSGPRHMIFCDFDCYAYVINELTSTVDVIKYNNFQKIPSIVQTVSIIPKNISINRCWAADIHIT
PNGRWLYCTDRSINIISCLEISKKTKKLKFVGYQLTEEQPRGFAIDYQGKFLVVAGQKSNCISLYKIDSDNGTLTMLSRY
SSGKGPMWVSIITLNCK

Sequences:

>Translated_337_residues
MIQIIYVASPESQQIHVWKLDSIYGLLELIQVIYTHGQAQPMAVHPNKRFLYVGIRPNFGITTYRIDQIGLLADHGTIGI
FSSPTHLISDKKGAFLYCTSYRNNTVSVIPISMSGMLLDSPIQIIEGLLGCHSANIDKFKKLLWVPCLKENAIRLFNINS
FGMLTSYDPSIIKINVGSGPRHMIFCDFDCYAYVINELTSTVDVIKYNNFQKIPSIVQTVSIIPKNISINRCWAADIHIT
PNGRWLYCTDRSINIISCLEISKKTKKLKFVGYQLTEEQPRGFAIDYQGKFLVVAGQKSNCISLYKIDSDNGTLTMLSRY
SSGKGPMWVSIITLNCK
>Mature_337_residues
MIQIIYVASPESQQIHVWKLDSIYGLLELIQVIYTHGQAQPMAVHPNKRFLYVGIRPNFGITTYRIDQIGLLADHGTIGI
FSSPTHLISDKKGAFLYCTSYRNNTVSVIPISMSGMLLDSPIQIIEGLLGCHSANIDKFKKLLWVPCLKENAIRLFNINS
FGMLTSYDPSIIKINVGSGPRHMIFCDFDCYAYVINELTSTVDVIKYNNFQKIPSIVQTVSIIPKNISINRCWAADIHIT
PNGRWLYCTDRSINIISCLEISKKTKKLKFVGYQLTEEQPRGFAIDYQGKFLVVAGQKSNCISLYKIDSDNGTLTMLSRY
SSGKGPMWVSIITLNCK

Specific function: Catalyzes the hydrolysis of 6-phosphogluconolactone to 6-phosphogluconate

COG id: COG2706

COG function: function code G; 3-carboxymuconate cyclase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the cycloisomerase 2 family

Homologues:

Organism=Escherichia coli, GI1786983, Length=332, Percent_Identity=45.4819277108434, Blast_Score=295, Evalue=2e-81,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): 6PGL_BLOPB (Q492W6)

Other databases:

- EMBL:   CP000016
- RefSeq:   YP_277851.1
- ProteinModelPortal:   Q492W6
- STRING:   Q492W6
- GeneID:   3562808
- GenomeReviews:   CP000016_GR
- KEGG:   bpn:BPEN_351
- eggNOG:   COG2706
- HOGENOM:   HBG741123
- OMA:   NIEGCHA
- ProtClustDB:   PRK11028
- BioCyc:   CBLO291272:BPEN_351-MONOMER
- HAMAP:   MF_01605
- InterPro:   IPR022528
- InterPro:   IPR019405
- InterPro:   IPR011045
- InterPro:   IPR015943
- Gene3D:   G3DSA:2.130.10.10

Pfam domain/function: PF10282 DUF2394; SSF50974 N2O_reductase_N

EC number: =3.1.1.31

Molecular weight: Translated: 37953; Mature: 37953

Theoretical pI: Translated: 9.02; Mature: 9.02

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.0 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
5.3 %Cys+Met (Translated Protein)
3.0 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
5.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIQIIYVASPESQQIHVWKLDSIYGLLELIQVIYTHGQAQPMAVHPNKRFLYVGIRPNFG
CEEEEEEECCCCCEEEEEEEHHHHHHHHHHHHHHHCCCCCCEEECCCCEEEEEEECCCCC
ITTYRIDQIGLLADHGTIGIFSSPTHLISDKKGAFLYCTSYRNNTVSVIPISMSGMLLDS
EEEEEEEEEEEEECCCEEEEECCCCHHCCCCCCCEEEEEECCCCEEEEEEEEECCEEECC
PIQIIEGLLGCHSANIDKFKKLLWVPCLKENAIRLFNINSFGMLTSYDPSIIKINVGSGP
HHHHHHHHHCCCCCCHHHHHHHHCCCCCCCCCEEEEEECCCCEEEECCCCEEEEECCCCC
RHMIFCDFDCYAYVINELTSTVDVIKYNNFQKIPSIVQTVSIIPKNISINRCWAADIHIT
CEEEEECCHHHHHHHHHHHHHEEEEEECCHHHHHHHHHHHHHCCCCCEEEEEEEEEEEEC
PNGRWLYCTDRSINIISCLEISKKTKKLKFVGYQLTEEQPRGFAIDYQGKFLVVAGQKSN
CCCCEEEEECCCCEEEEEEECCCCCCEEEEEEEEECCCCCCCEEEEECCEEEEEECCCCC
CISLYKIDSDNGTLTMLSRYSSGKGPMWVSIITLNCK
EEEEEEEECCCCEEEEEEECCCCCCCEEEEEEEEECC
>Mature Secondary Structure
MIQIIYVASPESQQIHVWKLDSIYGLLELIQVIYTHGQAQPMAVHPNKRFLYVGIRPNFG
CEEEEEEECCCCCEEEEEEEHHHHHHHHHHHHHHHCCCCCCEEECCCCEEEEEEECCCCC
ITTYRIDQIGLLADHGTIGIFSSPTHLISDKKGAFLYCTSYRNNTVSVIPISMSGMLLDS
EEEEEEEEEEEEECCCEEEEECCCCHHCCCCCCCEEEEEECCCCEEEEEEEEECCEEECC
PIQIIEGLLGCHSANIDKFKKLLWVPCLKENAIRLFNINSFGMLTSYDPSIIKINVGSGP
HHHHHHHHHCCCCCCHHHHHHHHCCCCCCCCCEEEEEECCCCEEEECCCCEEEEECCCCC
RHMIFCDFDCYAYVINELTSTVDVIKYNNFQKIPSIVQTVSIIPKNISINRCWAADIHIT
CEEEEECCHHHHHHHHHHHHHEEEEEECCHHHHHHHHHHHHHCCCCCEEEEEEEEEEEEC
PNGRWLYCTDRSINIISCLEISKKTKKLKFVGYQLTEEQPRGFAIDYQGKFLVVAGQKSN
CCCCEEEEECCCCEEEEEEECCCCCCEEEEEEEEECCCCCCCEEEEECCEEEEEECCCCC
CISLYKIDSDNGTLTMLSRYSSGKGPMWVSIITLNCK
EEEEEEEECCCCEEEEEEECCCCCCCEEEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA