Definition | Candidatus Blochmannia pennsylvanicus str. BPEN, complete genome. |
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Accession | NC_007292 |
Length | 791,654 |
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The map label for this gene is folD
Identifier: 71892087
GI number: 71892087
Start: 371401
End: 372261
Strand: Reverse
Name: folD
Synonym: BPEN_313
Alternate gene names: 71892087
Gene position: 372261-371401 (Counterclockwise)
Preceding gene: 71892089
Following gene: 71892085
Centisome position: 47.02
GC content: 32.98
Gene sequence:
>861_bases ATGATCGCTAAGATAATTGATGGTAAATATGTTTCTGAAAAAATAAAACAAGAAATAGCTAAACAAGTACGTAAAAATAT GAATTCCGGAAAACGTGCCCCAGGTTTGGCTATGATTCTAGTAGGACATAATCCAATTTCTCAGATATATGTAACTAATA AGAAAAAAGCATGTGAACAAGTGGGTTTGATTTCATTTCTTTATACTTTACCTATTACGGCTACAGAAAATGAGATTTTT CAATTAATTGAAACTTTAAATAATGATAATCGTATAGATGGTATTTTAATTCAGTTGCCATTACCAAATAAGTTAAATAA AATAAATGTTTTAGAACATATTGCTCCTGATAAGGATGTAGATGGTTTTCATCCATATAATGTCGGGCGTTTATGTCAAC GATCTCCTACATTACGTCCTTGCACTTCTCGAGGTATTATTACTTTGTTAGAATGGTATAATATAGATATGTTTGTATTA CATGCGGTTGTAGTTGGAGCATCAAATATCGTTGGTCGGCCTATGACTATGGAATTATTATTGGCAGGTTGTACGGTATC TGTTACTCATCGTTTTACTCAAAATTTGAAAATATACATTGAAAATGCTGATTTATTAATTGTGGCGGTAGGTCAAGCAA ATTTTATTCCCGGTAGTTGGATAAAACAAGGGGCTATAGTCATAGATGTTGGTATTAATCGATTAAATAACGGAAATATA GTGGGTGATGTTCACTTTTCTAGCGCTTACGAACGAGCTGCATACATTACTCCTGTTCCGGGTGGAGTAGGTCCAATGAC AGTAGTAACACTTATTCAAAATACCTTGCAAGCTTATGATGACCATCATTTAGTAAGATAA
Upstream 100 bases:
>100_bases ATATGCTTAGAGAAAGTATATAATTTAAAATTAATAGTAATATATATTACAGAAAATAATATCATCGTGTTAATATATAA TTCATTGGATATATTTTAAA
Downstream 100 bases:
>100_bases TTTTTGTTTATTCCATTTTTAATTATTTTTATTACTATTTATATTATTTGAAATGCCATTTCGTTATTCCTGTAGGCCCA TCTTCTAATGTTATTCCCAT
Product: bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase
Products: NA
Alternate protein names: Methylenetetrahydrofolate dehydrogenase; Methenyltetrahydrofolate cyclohydrolase
Number of amino acids: Translated: 286; Mature: 286
Protein sequence:
>286_residues MIAKIIDGKYVSEKIKQEIAKQVRKNMNSGKRAPGLAMILVGHNPISQIYVTNKKKACEQVGLISFLYTLPITATENEIF QLIETLNNDNRIDGILIQLPLPNKLNKINVLEHIAPDKDVDGFHPYNVGRLCQRSPTLRPCTSRGIITLLEWYNIDMFVL HAVVVGASNIVGRPMTMELLLAGCTVSVTHRFTQNLKIYIENADLLIVAVGQANFIPGSWIKQGAIVIDVGINRLNNGNI VGDVHFSSAYERAAYITPVPGGVGPMTVVTLIQNTLQAYDDHHLVR
Sequences:
>Translated_286_residues MIAKIIDGKYVSEKIKQEIAKQVRKNMNSGKRAPGLAMILVGHNPISQIYVTNKKKACEQVGLISFLYTLPITATENEIF QLIETLNNDNRIDGILIQLPLPNKLNKINVLEHIAPDKDVDGFHPYNVGRLCQRSPTLRPCTSRGIITLLEWYNIDMFVL HAVVVGASNIVGRPMTMELLLAGCTVSVTHRFTQNLKIYIENADLLIVAVGQANFIPGSWIKQGAIVIDVGINRLNNGNI VGDVHFSSAYERAAYITPVPGGVGPMTVVTLIQNTLQAYDDHHLVR >Mature_286_residues MIAKIIDGKYVSEKIKQEIAKQVRKNMNSGKRAPGLAMILVGHNPISQIYVTNKKKACEQVGLISFLYTLPITATENEIF QLIETLNNDNRIDGILIQLPLPNKLNKINVLEHIAPDKDVDGFHPYNVGRLCQRSPTLRPCTSRGIITLLEWYNIDMFVL HAVVVGASNIVGRPMTMELLLAGCTVSVTHRFTQNLKIYIENADLLIVAVGQANFIPGSWIKQGAIVIDVGINRLNNGNI VGDVHFSSAYERAAYITPVPGGVGPMTVVTLIQNTLQAYDDHHLVR
Specific function: Catalyzes the oxidation of 5,10- methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10- formyltetrahydrofolate
COG id: COG0190
COG function: function code H; 5,10-methylene-tetrahydrofolate dehydrogenase/Methenyl tetrahydrofolate cyclohydrolase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the tetrahydrofolate dehydrogenase/cyclohydrolase family
Homologues:
Organism=Homo sapiens, GI222418558, Length=291, Percent_Identity=41.5807560137457, Blast_Score=215, Evalue=3e-56, Organism=Homo sapiens, GI94721354, Length=291, Percent_Identity=41.9243986254296, Blast_Score=209, Evalue=2e-54, Organism=Homo sapiens, GI222136639, Length=287, Percent_Identity=41.1149825783972, Blast_Score=206, Evalue=1e-53, Organism=Homo sapiens, GI36796743, Length=228, Percent_Identity=26.3157894736842, Blast_Score=65, Evalue=5e-11, Organism=Escherichia coli, GI1786741, Length=283, Percent_Identity=68.5512367491166, Blast_Score=417, Evalue=1e-118, Organism=Caenorhabditis elegans, GI17568735, Length=288, Percent_Identity=40.2777777777778, Blast_Score=183, Evalue=1e-46, Organism=Saccharomyces cerevisiae, GI6321643, Length=295, Percent_Identity=38.6440677966102, Blast_Score=207, Evalue=1e-54, Organism=Saccharomyces cerevisiae, GI6319558, Length=283, Percent_Identity=39.2226148409894, Blast_Score=201, Evalue=2e-52, Organism=Saccharomyces cerevisiae, GI6322933, Length=313, Percent_Identity=25.5591054313099, Blast_Score=75, Evalue=2e-14, Organism=Drosophila melanogaster, GI17136818, Length=299, Percent_Identity=39.7993311036789, Blast_Score=213, Evalue=1e-55, Organism=Drosophila melanogaster, GI17136816, Length=299, Percent_Identity=39.7993311036789, Blast_Score=212, Evalue=2e-55, Organism=Drosophila melanogaster, GI24645718, Length=286, Percent_Identity=38.1118881118881, Blast_Score=191, Evalue=3e-49, Organism=Drosophila melanogaster, GI17137370, Length=286, Percent_Identity=38.1118881118881, Blast_Score=191, Evalue=3e-49, Organism=Drosophila melanogaster, GI62472483, Length=286, Percent_Identity=38.1118881118881, Blast_Score=191, Evalue=4e-49, Organism=Drosophila melanogaster, GI45551871, Length=286, Percent_Identity=38.1118881118881, Blast_Score=191, Evalue=4e-49,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): FOLD_BLOPB (Q493A0)
Other databases:
- EMBL: CP000016 - RefSeq: YP_277817.1 - HSSP: O50385 - ProteinModelPortal: Q493A0 - SMR: Q493A0 - STRING: Q493A0 - GeneID: 3562590 - GenomeReviews: CP000016_GR - KEGG: bpn:BPEN_313 - eggNOG: COG0190 - HOGENOM: HBG328751 - OMA: GIDNTKV - ProtClustDB: PRK10792 - BioCyc: CBLO291272:BPEN_313-MONOMER - GO: GO:0005488 - HAMAP: MF_01576 - InterPro: IPR016040 - InterPro: IPR000672 - InterPro: IPR020630 - InterPro: IPR020867 - InterPro: IPR020631 - Gene3D: G3DSA:3.40.50.720 - PRINTS: PR00085
Pfam domain/function: PF00763 THF_DHG_CYH; PF02882 THF_DHG_CYH_C
EC number: =1.5.1.5; =3.5.4.9
Molecular weight: Translated: 31630; Mature: 31630
Theoretical pI: Translated: 8.84; Mature: 8.84
Prosite motif: PS00766 THF_DHG_CYH_1; PS00767 THF_DHG_CYH_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIAKIIDGKYVSEKIKQEIAKQVRKNMNSGKRAPGLAMILVGHNPISQIYVTNKKKACEQ CCEEEECCHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCEEEEEECCHHHHHH VGLISFLYTLPITATENEIFQLIETLNNDNRIDGILIQLPLPNKLNKINVLEHIAPDKDV HHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCHHHHHHHCCCCCCC DGFHPYNVGRLCQRSPTLRPCTSRGIITLLEWYNIDMFVLHAVVVGASNIVGRPMTMELL CCCCCCCHHHHHHCCCCCCCCCCCCCEEEHHHHCCHHHHHHHHHHCCHHHCCCCHHHHHH LAGCTVSVTHRFTQNLKIYIENADLLIVAVGQANFIPGSWIKQGAIVIDVGINRLNNGNI HHCCEEEEHHHHCCCEEEEEECCCEEEEEECCCCCCCCHHHHCCCEEEEECCCCCCCCCE VGDVHFSSAYERAAYITPVPGGVGPMTVVTLIQNTLQAYDDHHLVR EEEEECCCHHCCCEEEECCCCCCCHHHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure MIAKIIDGKYVSEKIKQEIAKQVRKNMNSGKRAPGLAMILVGHNPISQIYVTNKKKACEQ CCEEEECCHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCEEEEEECCHHHHHH VGLISFLYTLPITATENEIFQLIETLNNDNRIDGILIQLPLPNKLNKINVLEHIAPDKDV HHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCHHHHHHHCCCCCCC DGFHPYNVGRLCQRSPTLRPCTSRGIITLLEWYNIDMFVLHAVVVGASNIVGRPMTMELL CCCCCCCHHHHHHCCCCCCCCCCCCCEEEHHHHCCHHHHHHHHHHCCHHHCCCCHHHHHH LAGCTVSVTHRFTQNLKIYIENADLLIVAVGQANFIPGSWIKQGAIVIDVGINRLNNGNI HHCCEEEEHHHHCCCEEEEEECCCEEEEEECCCCCCCCHHHHCCCEEEEECCCCCCCCCE VGDVHFSSAYERAAYITPVPGGVGPMTVVTLIQNTLQAYDDHHLVR EEEEECCCHHCCCEEEECCCCCCCHHHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA