Definition | Corynebacterium jeikeium K411, complete genome. |
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Accession | NC_007164 |
Length | 2,462,499 |
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The map label for this gene is gpsA2 [H]
Identifier: 68535997
GI number: 68535997
Start: 1098542
End: 1098931
Strand: Direct
Name: gpsA2 [H]
Synonym: jk0920
Alternate gene names: 68535997
Gene position: 1098542-1098931 (Clockwise)
Preceding gene: 68535996
Following gene: 68535998
Centisome position: 44.61
GC content: 63.59
Gene sequence:
>390_bases ATGGGATTTGGTGACAACACCTCGGCCACGGTCATCACTCGTGGTTTGGCGGAGAGCACCCGCTTGGCTCTAGAACTGGG AGCCGATGCTCGCACCATGGCCGGCTTGGCTGGGATGGGCGACCTCGTGGCAACCTGTACCTCCACGCTGTCGCGTAACC GCCGATTCGGAGTAAAGCTCGGCGAGGGAGCCACCCCGGATGAAGCTGCCGCGGCGAACAAGGGGCAGGTGGCCGAGGGT GTCGTCTCCTGCCAGTCCATCGCCGAGCTCGCAGAGAAGAATGGGGTAGAAGTGCCCATCGCTGATGCCATGGTGGACGT GTGCCACCGTGGCGCACCGGTGGATGAGATGCTGCAGCGGTTATTGGGCCGCAGCCGGAAATCGGAGTGA
Upstream 100 bases:
>100_bases CGAAGCTGAGCAGCGTTACACCAATACGGATGTCGTCGGATGTGAGATTGCCGGAACCTCCAAGAACGTCATCGCACTGG CCGCTGGAATTGCCCATGCC
Downstream 100 bases:
>100_bases CGTTGCCGAGCGCTACACTGTGAAGCGATGAATACACCAGCAGCCGATAACGCTTCCGTACGCTCTACTGCCACTGATGT TTCTGCAGAGCACCGCATTA
Product: hypothetical protein
Products: NA
Alternate protein names: NAD(P)H-dependent glycerol-3-phosphate dehydrogenase [H]
Number of amino acids: Translated: 129; Mature: 128
Protein sequence:
>129_residues MGFGDNTSATVITRGLAESTRLALELGADARTMAGLAGMGDLVATCTSTLSRNRRFGVKLGEGATPDEAAAANKGQVAEG VVSCQSIAELAEKNGVEVPIADAMVDVCHRGAPVDEMLQRLLGRSRKSE
Sequences:
>Translated_129_residues MGFGDNTSATVITRGLAESTRLALELGADARTMAGLAGMGDLVATCTSTLSRNRRFGVKLGEGATPDEAAAANKGQVAEG VVSCQSIAELAEKNGVEVPIADAMVDVCHRGAPVDEMLQRLLGRSRKSE >Mature_128_residues GFGDNTSATVITRGLAESTRLALELGADARTMAGLAGMGDLVATCTSTLSRNRRFGVKLGEGATPDEAAAANKGQVAEGV VSCQSIAELAEKNGVEVPIADAMVDVCHRGAPVDEMLQRLLGRSRKSE
Specific function: De novo phospholipid biosynthesis; glycerol-3 phosphate formation. [C]
COG id: COG0240
COG function: function code C; Glycerol-3-phosphate dehydrogenase
Gene ontology:
Cell location: Cytoplasm (Probable) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the NAD-dependent glycerol-3-phosphate dehydrogenase family [H]
Homologues:
Organism=Escherichia coli, GI1790037, Length=130, Percent_Identity=49.2307692307692, Blast_Score=112, Evalue=8e-27,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008927 - InterPro: IPR013328 - InterPro: IPR006168 - InterPro: IPR006109 - InterPro: IPR011128 - InterPro: IPR016040 [H]
Pfam domain/function: PF07479 NAD_Gly3P_dh_C; PF01210 NAD_Gly3P_dh_N [H]
EC number: =1.1.1.94 [H]
Molecular weight: Translated: 13319; Mature: 13188
Theoretical pI: Translated: 4.91; Mature: 4.91
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 3.9 %Met (Translated Protein) 6.2 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 5.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGFGDNTSATVITRGLAESTRLALELGADARTMAGLAGMGDLVATCTSTLSRNRRFGVKL CCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCHHHHHHHHHHHHHCCCCCCEEE GEGATPDEAAAANKGQVAEGVVSCQSIAELAEKNGVEVPIADAMVDVCHRGAPVDEMLQR CCCCCCCHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCHHHHHHH LLGRSRKSE HHHHCCCCC >Mature Secondary Structure GFGDNTSATVITRGLAESTRLALELGADARTMAGLAGMGDLVATCTSTLSRNRRFGVKL CCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCHHHHHHHHHHHHHCCCCCCEEE GEGATPDEAAAANKGQVAEGVVSCQSIAELAEKNGVEVPIADAMVDVCHRGAPVDEMLQR CCCCCCCHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCHHHHHHH LLGRSRKSE HHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA