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The map label for this gene is 68535983

Identifier: 68535983

GI number: 68535983

Start: 1083431

End: 1083943

Strand: Direct

Name: 68535983

Synonym: jk0906

Alternate gene names: NA

Gene position: 1083431-1083943 (Clockwise)

Preceding gene: 68535982

Following gene: 68535990

Centisome position: 44.0

GC content: 61.4

Gene sequence:

>513_bases
ATGCAGGATGCCCTTTTCGACGTCCATGGCCCCGACGACGAGGTCGGCTACCGCGTACCGATCGCCTGCCAAGTCGCCGG
CATCACCTACCGTCAGCTGGACTACTGGGCCCGCACAAAGCTGGTTCAACCCAGCATCCGTAACGCCGCTGGTTCCGGCT
CCCAGCGCCTTTACTCCTTCCGCGACATTTTGGTGCTGAAGATCGTGAAGGGCCTGCTGGATACCGGCATTTCCCTGCAG
AACATCCGCAAGGCTGTAGAAAAGCTGGAGAACTTGGGCGTCGATGACCTCGCCGGCATCACCCTTGTCTCCGACGGCCA
CACTGTCTACGAGTGCCGTTCCTCCGAAGAAGTCATTGACCTCCTCAACGGCGGCCAGGGCGTGTTCGGCATTGCAGTCC
CGGGACTGATGAAGGAACTCACCGGCACGATTACCGCCTTCCCGTCTGAGAAGGTTGTGCAGGACGCTGCCATCGACGAG
CTGGCCGAGCGTCGCCGTCGCCGTATGGCCTAG

Upstream 100 bases:

>100_bases
TTTTGTGACTCGTGTTAAAGTAATGTTCGGCTAGCGGTTGACTGAGCCGCAAACCGGTCTAATCTTTAGAAGAGAATTGA
AATTACACCAGGAGTGTTTC

Downstream 100 bases:

>100_bases
AGCTGCCTCAGAAAAGCTCCCCGCGCGCGCTGTTCTAGCTCGGGTAGGGGATTATCCCGCAGCTGCGGGGCCAGCACTCC
ACCATTCTCTTCTGCAACCT

Product: MerR family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 170; Mature: 170

Protein sequence:

>170_residues
MQDALFDVHGPDDEVGYRVPIACQVAGITYRQLDYWARTKLVQPSIRNAAGSGSQRLYSFRDILVLKIVKGLLDTGISLQ
NIRKAVEKLENLGVDDLAGITLVSDGHTVYECRSSEEVIDLLNGGQGVFGIAVPGLMKELTGTITAFPSEKVVQDAAIDE
LAERRRRRMA

Sequences:

>Translated_170_residues
MQDALFDVHGPDDEVGYRVPIACQVAGITYRQLDYWARTKLVQPSIRNAAGSGSQRLYSFRDILVLKIVKGLLDTGISLQ
NIRKAVEKLENLGVDDLAGITLVSDGHTVYECRSSEEVIDLLNGGQGVFGIAVPGLMKELTGTITAFPSEKVVQDAAIDE
LAERRRRRMA
>Mature_170_residues
MQDALFDVHGPDDEVGYRVPIACQVAGITYRQLDYWARTKLVQPSIRNAAGSGSQRLYSFRDILVLKIVKGLLDTGISLQ
NIRKAVEKLENLGVDDLAGITLVSDGHTVYECRSSEEVIDLLNGGQGVFGIAVPGLMKELTGTITAFPSEKVVQDAAIDE
LAERRRRRMA

Specific function: Unknown

COG id: COG0789

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH merR-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009061
- InterPro:   IPR000551 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18647; Mature: 18647

Theoretical pI: Translated: 5.30; Mature: 5.30

Prosite motif: PS50937 HTH_MERR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQDALFDVHGPDDEVGYRVPIACQVAGITYRQLDYWARTKLVQPSIRNAAGSGSQRLYSF
CCCCCCCCCCCCCCCCEECCEEEEECCCHHHHHHHHHHHHHCCCHHHHCCCCCHHHHHHH
RDILVLKIVKGLLDTGISLQNIRKAVEKLENLGVDDLAGITLVSDGHTVYECRSSEEVID
HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCHHCCEEEEECCCEEEECCCHHHHHH
LLNGGQGVFGIAVPGLMKELTGTITAFPSEKVVQDAAIDELAERRRRRMA
HHCCCCCEEEHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MQDALFDVHGPDDEVGYRVPIACQVAGITYRQLDYWARTKLVQPSIRNAAGSGSQRLYSF
CCCCCCCCCCCCCCCCEECCEEEEECCCHHHHHHHHHHHHHCCCHHHHCCCCCHHHHHHH
RDILVLKIVKGLLDTGISLQNIRKAVEKLENLGVDDLAGITLVSDGHTVYECRSSEEVID
HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCHHCCEEEEECCCEEEECCCHHHHHH
LLNGGQGVFGIAVPGLMKELTGTITAFPSEKVVQDAAIDELAERRRRRMA
HHCCCCCEEEHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]