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The map label for this gene is hsdS1 [H]

Identifier: 68535975

GI number: 68535975

Start: 1073360

End: 1074586

Strand: Direct

Name: hsdS1 [H]

Synonym: jk0898

Alternate gene names: 68535975

Gene position: 1073360-1074586 (Clockwise)

Preceding gene: 68535974

Following gene: 68535976

Centisome position: 43.59

GC content: 57.05

Gene sequence:

>1227_bases
ATGTACGGTACAGCGCCATTATGGAAGTTCGCGGAAGTATCGCCCCCAACCCCCGAACTCAACGGCCTTACCGAAGCTGA
CGAGGTGACGTTCATCCCGCTAGAAAACGTCTGGCCTACGAACAAAGCTGACGACTTTCAGATCGTCCCTTGGGAGAAGC
GGTTGACCGGATACACGCCGTTTCGCCGTGGTGATCTTCTCCTGCCGAAGGTCACTCCGACAGTGACACATGGGCGCACC
ATGTTTACTGACACCGCCACCGAACTCGGTGTCGCCTCCACCGAGGTCTACACAGTCCGTGCTCGTCCTGGGACAGACCC
TCGCTGGCTCGCGTATTTACTCGTCGGAACAGAGTTTTTGGGGCTCGCCGGGGCTTCCGTGCAGGGTACGGGTGGTTTGA
AGCGAATCAGTACGCAGTTTGTCGAATCTTACCTGTTACCAGACGCCTCATCGGAAGAGCAGCGTGCAATCGCGGATTAC
CTCGACCGCGAGACCGCCGAAATCGACGCCATGACCACCGACCTGGACAAGATGGAGGCGCTCCTGACAGAGCGAAGAGC
AACAACCGTGCGAAGCACCATGGATCGGGCTGCTGAGTTTGGCCGTATCCCGCTAGGGTATGTCGCGCAAACGGTCTCCG
GGGCTACCCCGTCCACTTCTATCGCAAAATATTGGGCGGATAGTGCTGAAAGCGGAATCCACTGGGTATCAATCGGGGAC
ATGAGCTCAGTCCCTGTTGTTTTGGAAACCCAGAAATATGTTTCCACCGAGGGGCGGAAAACGGCCCGCCTGAAGGTAGC
GGGGCCAGGCACCGTTCTGTTCGCGATGTATGGGGCCACGCTCGGGGCTGTATCTCGGTTGGGTGTTGACGCGTGTTGGA
ACCAAGCGATTCTTGGTGTGTTTCCTCACGAGAGTCGACTTAGCCCTGAATTCCTAGAGTCAGCGCTAATTGCTTTAAAG
CCGAGTCTCGAAGCCTTACACAGGGGAAATACTCAAAATAATCTCAACGCGGAACAGGTCAAAGGCTTGCCTATTCCGCT
TCCTCCCTTGGAGGTACAGGAAGCTATTAGCCAGGAGTTAAGCGAAAAGACTGCCGAGATCGATGCCATGCTCGCCGATA
TCACGGAACTGCGTGACCTGCTTGCCGAGCGCCGCGCCGCCGTCATTGCTGCGGCCGTGACCGGCCAGATCGACATCCCC
GCAGCTGAGGAGACCACCCATGACTAA

Upstream 100 bases:

>100_bases
CGCCAGTTCGGTCGCTGGAGGAGATCGACGCCGACGTCGCCGCGGTCATGGGCCGTCTGGCTGAAAAATTCGCGGAGGTG
CGAGAGTGACTACGTCGCTT

Downstream 100 bases:

>100_bases
CACGGAAATCACCCGCGAAAAAGCGCACGAGAGCTCCATCTGCAGCGCGCTCGCAGAGCGCGGTTGGACCTACGAGGAAG
GCAAGAACGATCAGGGCTGG

Product: putative DNA restriction-modification system, specificity subunit

Products: NA

Alternate protein names: S.StySJI; Type I restriction enzyme StySJI specificity protein; S protein [H]

Number of amino acids: Translated: 408; Mature: 408

Protein sequence:

>408_residues
MYGTAPLWKFAEVSPPTPELNGLTEADEVTFIPLENVWPTNKADDFQIVPWEKRLTGYTPFRRGDLLLPKVTPTVTHGRT
MFTDTATELGVASTEVYTVRARPGTDPRWLAYLLVGTEFLGLAGASVQGTGGLKRISTQFVESYLLPDASSEEQRAIADY
LDRETAEIDAMTTDLDKMEALLTERRATTVRSTMDRAAEFGRIPLGYVAQTVSGATPSTSIAKYWADSAESGIHWVSIGD
MSSVPVVLETQKYVSTEGRKTARLKVAGPGTVLFAMYGATLGAVSRLGVDACWNQAILGVFPHESRLSPEFLESALIALK
PSLEALHRGNTQNNLNAEQVKGLPIPLPPLEVQEAISQELSEKTAEIDAMLADITELRDLLAERRAAVIAAAVTGQIDIP
AAEETTHD

Sequences:

>Translated_408_residues
MYGTAPLWKFAEVSPPTPELNGLTEADEVTFIPLENVWPTNKADDFQIVPWEKRLTGYTPFRRGDLLLPKVTPTVTHGRT
MFTDTATELGVASTEVYTVRARPGTDPRWLAYLLVGTEFLGLAGASVQGTGGLKRISTQFVESYLLPDASSEEQRAIADY
LDRETAEIDAMTTDLDKMEALLTERRATTVRSTMDRAAEFGRIPLGYVAQTVSGATPSTSIAKYWADSAESGIHWVSIGD
MSSVPVVLETQKYVSTEGRKTARLKVAGPGTVLFAMYGATLGAVSRLGVDACWNQAILGVFPHESRLSPEFLESALIALK
PSLEALHRGNTQNNLNAEQVKGLPIPLPPLEVQEAISQELSEKTAEIDAMLADITELRDLLAERRAAVIAAAVTGQIDIP
AAEETTHD
>Mature_408_residues
MYGTAPLWKFAEVSPPTPELNGLTEADEVTFIPLENVWPTNKADDFQIVPWEKRLTGYTPFRRGDLLLPKVTPTVTHGRT
MFTDTATELGVASTEVYTVRARPGTDPRWLAYLLVGTEFLGLAGASVQGTGGLKRISTQFVESYLLPDASSEEQRAIADY
LDRETAEIDAMTTDLDKMEALLTERRATTVRSTMDRAAEFGRIPLGYVAQTVSGATPSTSIAKYWADSAESGIHWVSIGD
MSSVPVVLETQKYVSTEGRKTARLKVAGPGTVLFAMYGATLGAVSRLGVDACWNQAILGVFPHESRLSPEFLESALIALK
PSLEALHRGNTQNNLNAEQVKGLPIPLPPLEVQEAISQELSEKTAEIDAMLADITELRDLLAERRAAVIAAAVTGQIDIP
AAEETTHD

Specific function: The M and S subunits together form a methyltransferase (MTase) that methylates two adenine residues in complementary strands of a bipartite DNA recognition sequence. In the presence of the R subunit the complex can also act as an endonuclease, binding to

COG id: COG0732

COG function: function code V; Restriction endonuclease S subunits

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the type-I restriction system S methylase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000055 [H]

Pfam domain/function: PF01420 Methylase_S [H]

EC number: NA

Molecular weight: Translated: 44306; Mature: 44306

Theoretical pI: Translated: 4.50; Mature: 4.50

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYGTAPLWKFAEVSPPTPELNGLTEADEVTFIPLENVWPTNKADDFQIVPWEKRLTGYTP
CCCCCCCCHHCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCEEECCHHHHHCCCCC
FRRGDLLLPKVTPTVTHGRTMFTDTATELGVASTEVYTVRARPGTDPRWLAYLLVGTEFL
CCCCCEECCCCCCCCCCCCEEEECCHHHCCCCCEEEEEEEECCCCCHHHHHHHHHHHHHH
GLAGASVQGTGGLKRISTQFVESYLLPDASSEEQRAIADYLDRETAEIDAMTTDLDKMEA
HHCCCCCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHH
LLTERRATTVRSTMDRAAEFGRIPLGYVAQTVSGATPSTSIAKYWADSAESGIHWVSIGD
HHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCHHHHHHHHHHHCCCEEEEEECC
MSSVPVVLETQKYVSTEGRKTARLKVAGPGTVLFAMYGATLGAVSRLGVDACWNQAILGV
CCCCCEEEECHHHHCCCCCCEEEEEECCCCEEEHHHHHHHHHHHHHHCHHHHHCCCEEEE
FPHESRLSPEFLESALIALKPSLEALHRGNTQNNLNAEQVKGLPIPLPPLEVQEAISQEL
CCCCCCCCHHHHHHHHHHHCCCHHHHHCCCCCCCCCHHHHCCCCCCCCCHHHHHHHHHHH
SEKTAEIDAMLADITELRDLLAERRAAVIAAAVTGQIDIPAAEETTHD
HHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEECCEECCCCCCCCCC
>Mature Secondary Structure
MYGTAPLWKFAEVSPPTPELNGLTEADEVTFIPLENVWPTNKADDFQIVPWEKRLTGYTP
CCCCCCCCHHCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCEEECCHHHHHCCCCC
FRRGDLLLPKVTPTVTHGRTMFTDTATELGVASTEVYTVRARPGTDPRWLAYLLVGTEFL
CCCCCEECCCCCCCCCCCCEEEECCHHHCCCCCEEEEEEEECCCCCHHHHHHHHHHHHHH
GLAGASVQGTGGLKRISTQFVESYLLPDASSEEQRAIADYLDRETAEIDAMTTDLDKMEA
HHCCCCCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHH
LLTERRATTVRSTMDRAAEFGRIPLGYVAQTVSGATPSTSIAKYWADSAESGIHWVSIGD
HHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCHHHHHHHHHHHCCCEEEEEECC
MSSVPVVLETQKYVSTEGRKTARLKVAGPGTVLFAMYGATLGAVSRLGVDACWNQAILGV
CCCCCEEEECHHHHCCCCCCEEEEEECCCCEEEHHHHHHHHHHHHHHCHHHHHCCCEEEE
FPHESRLSPEFLESALIALKPSLEALHRGNTQNNLNAEQVKGLPIPLPPLEVQEAISQEL
CCCCCCCCHHHHHHHHHHHCCCHHHHHCCCCCCCCCHHHHCCCCCCCCCHHHHHHHHHHH
SEKTAEIDAMLADITELRDLLAERRAAVIAAAVTGQIDIPAAEETTHD
HHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEECCEECCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 2838725; 11677609; 3025838 [H]