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The map label for this gene is hsdM1 [C]

Identifier: 68535974

GI number: 68535974

Start: 1071414

End: 1073348

Strand: Direct

Name: hsdM1 [C]

Synonym: jk0897

Alternate gene names: 68535974

Gene position: 1071414-1073348 (Clockwise)

Preceding gene: 68535972

Following gene: 68535975

Centisome position: 43.51

GC content: 61.55

Gene sequence:

>1935_bases
ATGAGTACAGCGGAACTCAATCAGTCCGCCGTTTGGAACACAGCGGACAAGTTTCTGCGCTCCATCGTCGAGCCTGAAGA
TTACGGAGACTATATTCTGCCGATGACGGTGCTGCGCCGTCTAGAGTGCATTCTCGCTCCGACCAAAGACGAAGTGCTCG
ACCTGGTATGGAGTCTTCAGGAGGAGGGCTTCAGCGACGAGATGATTGACTGGGAAGTGCAGACCCGTTTCGGTCTTTCC
TTCTACAACTCTTCTCGCCTGGACCTGACGCGGATCGCCCAGCTCGATGACCACGTATATGAGGCGCTAATGGATTACGT
TGACGCGTTCTCGGCCTCCGTCCGCGACGTGTGGGATGCTTTCGATTTCGCGGTGAAGATGAAGACCCTCGATAGTGCCT
CGCGCCTGTGGCCGGTGGTCAAACACTTCGCCACCATCGACATGAGCATGGAAGCGCTGCCGGATGCACAAATGGGCGAT
CTTTTCGAGCACGTCATGTACAAGGCCTTTGACACCAAGGGTAAAGCCGCGGGTGCGTTCTACACTCCGCGTGACGCGAT
CCGGCTGATGGTGGATATTCTTTTCGCTTCCGACGACGTCGGGCTGACCGCGGACGGCGCTTCGCGTACCGTGTACGACC
CGACTGCGGGCACCGGCGGCATGCTGCTCGTTGCCGCGCGTGCCCTCAAGGAGCTCAACCCGGACATCGAGGTAGTTCTG
GCTGGCCAAGAACTTATGTCCACCGGTTATGCCATCGGTAAGGCCGACCTGCTCATCCAGGGCGGTGAGCCGGACGCTAT
CCGTCACGGCGATACCTTGCTCACCGACCTCTACGAGGGTGAGCAGTTCGAGTACATCCTCTCCAACCCGCCGTTCGGCA
TGGACTGGGAGGTTCAGCAGAAGTCGGTGAAGGAGCAGGCCAAAGTGCCAGGCTCCCGGTTCAGCCACGGCCTGCCGGGC
AAGGACGATGGCCAGATGCTTTTCCTGGCCCATGTCGCTTCGAAGCTCATGCCCGCAGGCCCCAATGGTGCGGGCGGTCG
TGGGGCGGTGGTGTCCAATGGCTCGCCGCTGTTTACCGGTGCGCCGGAATCGGGGCCGGATAAGATCCGCGCCTGGCTGC
TGGAAAGCGACCTGGTGGACGCGATCATCCAGCTGCCGACGAATATGTTCTACGGCACGGGGATCTCTACCTATGTGTGG
ATCTTGGACACGAACAAGGAGGAGCACCGCAAGGGCTTCGTCCAGCTGATCGATGCCTCCGAGTGCTGGTCGGTACCGGA
TAAGGGGCTGGGGGAGAAGCGCCGGGAGATGAAGGAGCCAGACCGCAAGCGCGTGCTCGAAGAGTACGCCGGGTTCGAGG
ACACCGAGATCTCGAAGGTGCTCACACCAGCGGACCTGGGCTTTCGCGACGTGAAGGTCACCAAGCAAAAGCGCCTGCGC
GTAGGGGTCACCCCGGAGGCTGTGTCACGGGTGCTGGAGCACAAATCCGCCGTGCCCGAGCACGCGGAGGTGCTTGCCGA
TGTGGCGGACGTGAAGTTCAATGACCTGCCGGAGGCGCTGAAGGCTGCGGCCAAGAAGCGTGGTGTGAAGATGCTCGCCG
GCATGATTGACGAGGTGCTTGAGGCGGTGGGGGTGCCGGACGAGAACGCCGAGCCAAGCGTGGACCGCAAGGGCAAGCCG
ATCCTCGACTCAGCCTTCTCCATGACAGAGCGCATCCCGCTGACGGAGGATGTCGATGCGCACATGGAGCGCGAGGTCCT
CCCATTCGCGCCGGACGTCACTTGGGATGAGGAGGCCGCCAAGGTGGGCTACGAGATCCCGTTCAAGCGCGTGTTCTACC
GACCAACGCCAGTTCGGTCGCTGGAGGAGATCGACGCCGACGTCGCCGCGGTCATGGGCCGTCTGGCTGAAAAATTCGCG
GAGGTGCGAGAGTGA

Upstream 100 bases:

>100_bases
ACTAGAAGGCGAGACAGCGCGTGCGTGTCTCGAGAACGATTTTGGACAGTGCGTTTACCGTAGGGGCACTGAAACCTTTG
GCTCAAGGAGGCATTCCCGG

Downstream 100 bases:

>100_bases
CTACGTCGCTTATGTACGGTACAGCGCCATTATGGAAGTTCGCGGAAGTATCGCCCCCAACCCCCGAACTCAACGGCCTT
ACCGAAGCTGACGAGGTGAC

Product: putative DNA restriction-modification system, DNA methylase

Products: NA

Alternate protein names: M.MjaXP [H]

Number of amino acids: Translated: 644; Mature: 643

Protein sequence:

>644_residues
MSTAELNQSAVWNTADKFLRSIVEPEDYGDYILPMTVLRRLECILAPTKDEVLDLVWSLQEEGFSDEMIDWEVQTRFGLS
FYNSSRLDLTRIAQLDDHVYEALMDYVDAFSASVRDVWDAFDFAVKMKTLDSASRLWPVVKHFATIDMSMEALPDAQMGD
LFEHVMYKAFDTKGKAAGAFYTPRDAIRLMVDILFASDDVGLTADGASRTVYDPTAGTGGMLLVAARALKELNPDIEVVL
AGQELMSTGYAIGKADLLIQGGEPDAIRHGDTLLTDLYEGEQFEYILSNPPFGMDWEVQQKSVKEQAKVPGSRFSHGLPG
KDDGQMLFLAHVASKLMPAGPNGAGGRGAVVSNGSPLFTGAPESGPDKIRAWLLESDLVDAIIQLPTNMFYGTGISTYVW
ILDTNKEEHRKGFVQLIDASECWSVPDKGLGEKRREMKEPDRKRVLEEYAGFEDTEISKVLTPADLGFRDVKVTKQKRLR
VGVTPEAVSRVLEHKSAVPEHAEVLADVADVKFNDLPEALKAAAKKRGVKMLAGMIDEVLEAVGVPDENAEPSVDRKGKP
ILDSAFSMTERIPLTEDVDAHMEREVLPFAPDVTWDEEAAKVGYEIPFKRVFYRPTPVRSLEEIDADVAAVMGRLAEKFA
EVRE

Sequences:

>Translated_644_residues
MSTAELNQSAVWNTADKFLRSIVEPEDYGDYILPMTVLRRLECILAPTKDEVLDLVWSLQEEGFSDEMIDWEVQTRFGLS
FYNSSRLDLTRIAQLDDHVYEALMDYVDAFSASVRDVWDAFDFAVKMKTLDSASRLWPVVKHFATIDMSMEALPDAQMGD
LFEHVMYKAFDTKGKAAGAFYTPRDAIRLMVDILFASDDVGLTADGASRTVYDPTAGTGGMLLVAARALKELNPDIEVVL
AGQELMSTGYAIGKADLLIQGGEPDAIRHGDTLLTDLYEGEQFEYILSNPPFGMDWEVQQKSVKEQAKVPGSRFSHGLPG
KDDGQMLFLAHVASKLMPAGPNGAGGRGAVVSNGSPLFTGAPESGPDKIRAWLLESDLVDAIIQLPTNMFYGTGISTYVW
ILDTNKEEHRKGFVQLIDASECWSVPDKGLGEKRREMKEPDRKRVLEEYAGFEDTEISKVLTPADLGFRDVKVTKQKRLR
VGVTPEAVSRVLEHKSAVPEHAEVLADVADVKFNDLPEALKAAAKKRGVKMLAGMIDEVLEAVGVPDENAEPSVDRKGKP
ILDSAFSMTERIPLTEDVDAHMEREVLPFAPDVTWDEEAAKVGYEIPFKRVFYRPTPVRSLEEIDADVAAVMGRLAEKFA
EVRE
>Mature_643_residues
STAELNQSAVWNTADKFLRSIVEPEDYGDYILPMTVLRRLECILAPTKDEVLDLVWSLQEEGFSDEMIDWEVQTRFGLSF
YNSSRLDLTRIAQLDDHVYEALMDYVDAFSASVRDVWDAFDFAVKMKTLDSASRLWPVVKHFATIDMSMEALPDAQMGDL
FEHVMYKAFDTKGKAAGAFYTPRDAIRLMVDILFASDDVGLTADGASRTVYDPTAGTGGMLLVAARALKELNPDIEVVLA
GQELMSTGYAIGKADLLIQGGEPDAIRHGDTLLTDLYEGEQFEYILSNPPFGMDWEVQQKSVKEQAKVPGSRFSHGLPGK
DDGQMLFLAHVASKLMPAGPNGAGGRGAVVSNGSPLFTGAPESGPDKIRAWLLESDLVDAIIQLPTNMFYGTGISTYVWI
LDTNKEEHRKGFVQLIDASECWSVPDKGLGEKRREMKEPDRKRVLEEYAGFEDTEISKVLTPADLGFRDVKVTKQKRLRV
GVTPEAVSRVLEHKSAVPEHAEVLADVADVKFNDLPEALKAAAKKRGVKMLAGMIDEVLEAVGVPDENAEPSVDRKGKPI
LDSAFSMTERIPLTEDVDAHMEREVLPFAPDVTWDEEAAKVGYEIPFKRVFYRPTPVRSLEEIDADVAAVMGRLAEKFAE
VRE

Specific function: Methylation of specific adenine residues; required for both restriction and modification activities [H]

COG id: COG0286

COG function: function code V; Type I restriction-modification system methyltransferase subunit

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the N(4)/N(6)-methyltransferase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR022749
- InterPro:   IPR003356
- InterPro:   IPR002052
- InterPro:   IPR002296 [H]

Pfam domain/function: PF12161 HsdM_N; PF02384 N6_Mtase [H]

EC number: =2.1.1.72 [H]

Molecular weight: Translated: 71361; Mature: 71230

Theoretical pI: Translated: 4.43; Mature: 4.43

Prosite motif: PS00092 N6_MTASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSTAELNQSAVWNTADKFLRSIVEPEDYGDYILPMTVLRRLECILAPTKDEVLDLVWSLQ
CCCCCCCCHHHHHHHHHHHHHHCCCCCCCCEEHHHHHHHHHHHHHCCCHHHHHHHHHHHH
EEGFSDEMIDWEVQTRFGLSFYNSSRLDLTRIAQLDDHVYEALMDYVDAFSASVRDVWDA
HCCCCCCCCCEEEHHHHCEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FDFAVKMKTLDSASRLWPVVKHFATIDMSMEALPDAQMGDLFEHVMYKAFDTKGKAAGAF
HHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCCC
YTPRDAIRLMVDILFASDDVGLTADGASRTVYDPTAGTGGMLLVAARALKELNPDIEVVL
CCHHHHHHHHHHHHHCCCCCCEECCCCCCEEECCCCCCCHHHHHHHHHHHHCCCCEEEEE
AGQELMSTGYAIGKADLLIQGGEPDAIRHGDTLLTDLYEGEQFEYILSNPPFGMDWEVQQ
ECHHHHHCCCCCCCEEEEEECCCCCCCCCCCHHHHHHHCCCCEEEEECCCCCCCCCHHHH
KSVKEQAKVPGSRFSHGLPGKDDGQMLFLAHVASKLMPAGPNGAGGRGAVVSNGSPLFTG
HHHHHHHCCCCCCCCCCCCCCCCCCEEHHHHHHHHHCCCCCCCCCCCCCEEECCCEEEEC
APESGPDKIRAWLLESDLVDAIIQLPTNMFYGTGISTYVWILDTNKEEHRKGFVQLIDAS
CCCCCHHHHHHHHHHHHHHHHHHHHCCHHEECCCCEEEEEEEECCHHHHHHHHHHEECCH
ECWSVPDKGLGEKRREMKEPDRKRVLEEYAGFEDTEISKVLTPADLGFRDVKVTKQKRLR
HHCCCCCCCCCHHHHHHCCCHHHHHHHHHCCCCCCCHHHHCCCCCCCCCHHEHHHHHCEE
VGVTPEAVSRVLEHKSAVPEHAEVLADVADVKFNDLPEALKAAAKKRGVKMLAGMIDEVL
CCCCHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
EAVGVPDENAEPSVDRKGKPILDSAFSMTERIPLTEDVDAHMEREVLPFAPDVTWDEEAA
HHHCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCHHHHHHCCCCCCCCCCCCCHHHH
KVGYEIPFKRVFYRPTPVRSLEEIDADVAAVMGRLAEKFAEVRE
HCCCCCCHHHHEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
STAELNQSAVWNTADKFLRSIVEPEDYGDYILPMTVLRRLECILAPTKDEVLDLVWSLQ
CCCCCCCHHHHHHHHHHHHHHCCCCCCCCEEHHHHHHHHHHHHHCCCHHHHHHHHHHHH
EEGFSDEMIDWEVQTRFGLSFYNSSRLDLTRIAQLDDHVYEALMDYVDAFSASVRDVWDA
HCCCCCCCCCEEEHHHHCEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FDFAVKMKTLDSASRLWPVVKHFATIDMSMEALPDAQMGDLFEHVMYKAFDTKGKAAGAF
HHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCCC
YTPRDAIRLMVDILFASDDVGLTADGASRTVYDPTAGTGGMLLVAARALKELNPDIEVVL
CCHHHHHHHHHHHHHCCCCCCEECCCCCCEEECCCCCCCHHHHHHHHHHHHCCCCEEEEE
AGQELMSTGYAIGKADLLIQGGEPDAIRHGDTLLTDLYEGEQFEYILSNPPFGMDWEVQQ
ECHHHHHCCCCCCCEEEEEECCCCCCCCCCCHHHHHHHCCCCEEEEECCCCCCCCCHHHH
KSVKEQAKVPGSRFSHGLPGKDDGQMLFLAHVASKLMPAGPNGAGGRGAVVSNGSPLFTG
HHHHHHHCCCCCCCCCCCCCCCCCCEEHHHHHHHHHCCCCCCCCCCCCCEEECCCEEEEC
APESGPDKIRAWLLESDLVDAIIQLPTNMFYGTGISTYVWILDTNKEEHRKGFVQLIDAS
CCCCCHHHHHHHHHHHHHHHHHHHHCCHHEECCCCEEEEEEEECCHHHHHHHHHHEECCH
ECWSVPDKGLGEKRREMKEPDRKRVLEEYAGFEDTEISKVLTPADLGFRDVKVTKQKRLR
HHCCCCCCCCCHHHHHHCCCHHHHHHHHHCCCCCCCHHHHCCCCCCCCCHHEHHHHHCEE
VGVTPEAVSRVLEHKSAVPEHAEVLADVADVKFNDLPEALKAAAKKRGVKMLAGMIDEVL
CCCCHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
EAVGVPDENAEPSVDRKGKPILDSAFSMTERIPLTEDVDAHMEREVLPFAPDVTWDEEAA
HHHCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCHHHHHHCCCCCCCCCCCCCHHHH
KVGYEIPFKRVFYRPTPVRSLEEIDADVAAVMGRLAEKFAEVRE
HCCCCCCHHHHEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]