Definition | Corynebacterium jeikeium K411, complete genome. |
---|---|
Accession | NC_007164 |
Length | 2,462,499 |
Click here to switch to the map view.
The map label for this gene is uspA3
Identifier: 68535903
GI number: 68535903
Start: 985268
End: 985702
Strand: Direct
Name: uspA3
Synonym: jk0828
Alternate gene names: NA
Gene position: 985268-985702 (Clockwise)
Preceding gene: 68535902
Following gene: 68535907
Centisome position: 40.01
GC content: 64.37
Gene sequence:
>435_bases ATGTACAACACAGTCGTGGTCGGAACCGATGGGTCGGAATCTTCTTTTCTAGCAGTGCGACGCGCCGCGGGCGTAGCCGC CGCCATGGACGCGGAGCTCGTCCTGGCCAGCGCGTATGTGGGGGAGCACGCGGATACCGCGACCAAGCAGACTACTGCGG TGGACGGGGAAATGTCTGCGGCTGAGGTGTTGGCGTCCGCACGAAAAGAGGCCGAAGGGGAAGGCGCGAAGAAGGTTCGC GCGGTGCTGAAGGAAGGCGATCCGGTGGAGGCGCTGATGAGCATCGTCAAGAGCGAGGAGGCGGATCTGCTGGTGGTCGG CAACCGTGGCATTAACTCGCTGACCGGGCGCCTGCTGGGCAGTGTGCCAGCCGATGCGGCACGTCAGGCGGAGTGCGACG TGATGATCGTTCACACCGTCGGCACCAGGGACTAG
Upstream 100 bases:
>100_bases GAACTGAAGTTCGAGCTCGCCGGCCGTCTCCGCGACGAAATCGCGGACCTAAAAAAGGAACTACGGGGCATGATCGAAGC TGGGTTGTAATATTAGAGTT
Downstream 100 bases:
>100_bases CCCTTCCTGATCCGCGTTAGACCCGCCTAATCCCAGGGCAATGGGCGGGCATGCACGACCGTCAGTCCCTGGGTGGCGCG CGTCATGGCCACATAAAGGT
Product: putative universal stress protein
Products: NA
Alternate protein names: USP Rv1636 [H]
Number of amino acids: Translated: 144; Mature: 144
Protein sequence:
>144_residues MYNTVVVGTDGSESSFLAVRRAAGVAAAMDAELVLASAYVGEHADTATKQTTAVDGEMSAAEVLASARKEAEGEGAKKVR AVLKEGDPVEALMSIVKSEEADLLVVGNRGINSLTGRLLGSVPADAARQAECDVMIVHTVGTRD
Sequences:
>Translated_144_residues MYNTVVVGTDGSESSFLAVRRAAGVAAAMDAELVLASAYVGEHADTATKQTTAVDGEMSAAEVLASARKEAEGEGAKKVR AVLKEGDPVEALMSIVKSEEADLLVVGNRGINSLTGRLLGSVPADAARQAECDVMIVHTVGTRD >Mature_144_residues MYNTVVVGTDGSESSFLAVRRAAGVAAAMDAELVLASAYVGEHADTATKQTTAVDGEMSAAEVLASARKEAEGEGAKKVR AVLKEGDPVEALMSIVKSEEADLLVVGNRGINSLTGRLLGSVPADAARQAECDVMIVHTVGTRD
Specific function: Unknown
COG id: COG0589
COG function: function code T; Universal stress protein UspA and related nucleotide-binding proteins
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the universal stress protein A family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR014729 - InterPro: IPR006015 - InterPro: IPR006016 [H]
Pfam domain/function: PF00582 Usp [H]
EC number: NA
Molecular weight: Translated: 14818; Mature: 14818
Theoretical pI: Translated: 4.46; Mature: 4.46
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MYNTVVVGTDGSESSFLAVRRAAGVAAAMDAELVLASAYVGEHADTATKQTTAVDGEMSA CCCEEEEECCCCCCHHHHHHHHHCHHHHHHHHHHHHHHHHCCCCCCCCCHHCCCCCCHHH AEVLASARKEAEGEGAKKVRAVLKEGDPVEALMSIVKSEEADLLVVGNRGINSLTGRLLG HHHHHHHHHHCCCCCHHHHHHHHHCCCCHHHHHHHHCCCCCCEEEECCCCCHHHHHHHHC SVPADAARQAECDVMIVHTVGTRD CCCCCCCCCCCCCEEEEEECCCCC >Mature Secondary Structure MYNTVVVGTDGSESSFLAVRRAAGVAAAMDAELVLASAYVGEHADTATKQTTAVDGEMSA CCCEEEEECCCCCCHHHHHHHHHCHHHHHHHHHHHHHHHHCCCCCCCCCHHCCCCCCHHH AEVLASARKEAEGEGAKKVRAVLKEGDPVEALMSIVKSEEADLLVVGNRGINSLTGRLLG HHHHHHHHHHCCCCCHHHHHHHHHCCCCHHHHHHHHCCCCCCEEEECCCCCHHHHHHHHC SVPADAARQAECDVMIVHTVGTRD CCCCCCCCCCCCCEEEEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036 [H]