Definition | Corynebacterium jeikeium K411, complete genome. |
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Accession | NC_007164 |
Length | 2,462,499 |
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The map label for this gene is feaR [C]
Identifier: 68535892
GI number: 68535892
Start: 969321
End: 970004
Strand: Direct
Name: feaR [C]
Synonym: jk0817
Alternate gene names: 68535892
Gene position: 969321-970004 (Clockwise)
Preceding gene: 68535889
Following gene: 68535893
Centisome position: 39.36
GC content: 63.6
Gene sequence:
>684_bases GTGGCCTGGTGGTGGGCCACCTCGTGGGACCTCCCCTCGGGGCACCACTCGTCGCAAGAACTCCTAGCCTTCCCCGCGAG CAACCTCGCCTTCGAAATGGACCAGGTGCGCTTCTGGGGACCCACCACGCGGCGCTCCACAAGAGTCCTGGTCGGGCAGG GATGGGTGCTCGGTGCCTTGCTACGTCCGGCAGCAGTGCCCGCCTTCACTCAACAACCCGCAGCCTGCCGCGACGATTCT GTCCCTGTCTCCGCCCTCGAACTCCACGAAACGGTTCAGGCATCAAGCGGCAGCCTTGCCGCTGTCATCGATGAAGTCGA GGGGTGGCTTGCACACCACGTGGGCCCGCTGACCGACGAGGCTCACCAAGCCAACCGTTTGGCCGACCTGGCCATCACTG ACTCCACCATCGCCACGGTGCAAGACCTCGCGGGCGCTTTGGGTATCTCGACTCGAACGGTCAACCGACTCACCACGAAG TATGTGGGTCTGTCGCCCTACACGATGATCCGCCGCCGACGCCTCCAAGAAGCGACCGAATGGATCCGTGACAACCCAGA TGAAACGCTGGCCGATGTCGCAGTCCGCTACGGCTTCGTTGACCAGGCACACCTGAGTCGTGAAGCGCGCACTCTTCTTG GGATGACCCTCACGGACTACCGCATGCGCACGATCAGGCAGTGA
Upstream 100 bases:
>100_bases GACCACACCATCTGACGTCAGTGGACGGGGCCCATTGTTCCCAGCGGAACTTCCCTTCGATTTCACCCGGATCCCACCCG GCCCCGCGGCCAAGGACTTG
Downstream 100 bases:
>100_bases CGATACCCGTCTAGCCTCAATCAACGTGTCCGGTCAGTACAACTAGTGGAGCGAGTTAAAGAAGCCGAGGAAGAAGGCAA GAGTGAACTGCAGAAAGCGC
Product: AraC family transcriptional regulator
Products: NA
Alternate protein names: Transcriptional Regulator AraC Family; Transcriptional Regulator; Helix-Turn-Helix AraC Domain-Containing Protein; Helix-Turn-Helix Domain-Containing Protein; AraC-Family Transcriptional Regulator; AraC Family Transcription Regulator; Helix-Turn-Helix- Domain Containing Protein; Helix-Turn-Helix- Domain Containing Protein AraC Type; Helix-Turn-Helix Domain-/AraC Domain-Containing Protein; Helix-Turn-Helix AraC Domain Protein
Number of amino acids: Translated: 227; Mature: 226
Protein sequence:
>227_residues MAWWWATSWDLPSGHHSSQELLAFPASNLAFEMDQVRFWGPTTRRSTRVLVGQGWVLGALLRPAAVPAFTQQPAACRDDS VPVSALELHETVQASSGSLAAVIDEVEGWLAHHVGPLTDEAHQANRLADLAITDSTIATVQDLAGALGISTRTVNRLTTK YVGLSPYTMIRRRRLQEATEWIRDNPDETLADVAVRYGFVDQAHLSREARTLLGMTLTDYRMRTIRQ
Sequences:
>Translated_227_residues MAWWWATSWDLPSGHHSSQELLAFPASNLAFEMDQVRFWGPTTRRSTRVLVGQGWVLGALLRPAAVPAFTQQPAACRDDS VPVSALELHETVQASSGSLAAVIDEVEGWLAHHVGPLTDEAHQANRLADLAITDSTIATVQDLAGALGISTRTVNRLTTK YVGLSPYTMIRRRRLQEATEWIRDNPDETLADVAVRYGFVDQAHLSREARTLLGMTLTDYRMRTIRQ >Mature_226_residues AWWWATSWDLPSGHHSSQELLAFPASNLAFEMDQVRFWGPTTRRSTRVLVGQGWVLGALLRPAAVPAFTQQPAACRDDSV PVSALELHETVQASSGSLAAVIDEVEGWLAHHVGPLTDEAHQANRLADLAITDSTIATVQDLAGALGISTRTVNRLTTKY VGLSPYTMIRRRRLQEATEWIRDNPDETLADVAVRYGFVDQAHLSREARTLLGMTLTDYRMRTIRQ
Specific function: Positive Regulator Of Tyna/Maoa And Feab/Pada, The Genes For 2-Phenylethylamine Catabolism. [C]
COG id: COG2207
COG function: function code K; AraC-type DNA-binding domain-containing proteins
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25204; Mature: 25073
Theoretical pI: Translated: 6.40; Mature: 6.40
Prosite motif: PS00041 HTH_ARAC_FAMILY_1 ; PS01124 HTH_ARAC_FAMILY_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAWWWATSWDLPSGHHSSQELLAFPASNLAFEMDQVRFWGPTTRRSTRVLVGQGWVLGAL CCEEEECCCCCCCCCCCCHHHEECCCCCCEEECCCEEECCCCCCCCCEEEEECCHHHHHH LRPAAVPAFTQQPAACRDDSVPVSALELHETVQASSGSLAAVIDEVEGWLAHHVGPLTDE HHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCHH AHQANRLADLAITDSTIATVQDLAGALGISTRTVNRLTTKYVGLSPYTMIRRRRLQEATE HHHHHHHHHEEECCHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH WIRDNPDETLADVAVRYGFVDQAHLSREARTLLGMTLTDYRMRTIRQ HHHCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHCCHHHHHHHHHHCC >Mature Secondary Structure AWWWATSWDLPSGHHSSQELLAFPASNLAFEMDQVRFWGPTTRRSTRVLVGQGWVLGAL CEEEECCCCCCCCCCCCHHHEECCCCCCEEECCCEEECCCCCCCCCEEEEECCHHHHHH LRPAAVPAFTQQPAACRDDSVPVSALELHETVQASSGSLAAVIDEVEGWLAHHVGPLTDE HHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCHH AHQANRLADLAITDSTIATVQDLAGALGISTRTVNRLTTKYVGLSPYTMIRRRRLQEATE HHHHHHHHHEEECCHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH WIRDNPDETLADVAVRYGFVDQAHLSREARTLLGMTLTDYRMRTIRQ HHHCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHCCHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: DNA [C]
Specific reaction: Protein + DNA = Protein-DNA [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA