Definition | Corynebacterium jeikeium K411, complete genome. |
---|---|
Accession | NC_007164 |
Length | 2,462,499 |
Click here to switch to the map view.
The map label for this gene is murC
Identifier: 68535826
GI number: 68535826
Start: 897878
End: 899374
Strand: Direct
Name: murC
Synonym: jk0751
Alternate gene names: 68535826
Gene position: 897878-899374 (Clockwise)
Preceding gene: 68535825
Following gene: 68535827
Centisome position: 36.46
GC content: 62.12
Gene sequence:
>1497_bases ATGAGCGATCAGCTTCAGACCACGGACCTCTCCCGCGTGCACATGGTGGGCATCGGTGGTGCCGGCATGTCCGGTATCGC CCGCATCCTGCTGGATCGCGGCTACCAGGTCAGTGGGTCGGATATGAAGGAGTCGCGCAGCATCATGGCGCTGCGTGCGG CCGGCGCGCAGATTCAGGTCGGGCACGCTGAGGATAACCTGCGCTTGTCCGGGGAGATGCCGACGGTAGTCGTTACCTCT TTCGCCGCGATTCCGCAGGATAACCCGGAGCTCGTTGGTGCCCGCGAAGCAGGTATTCCGGTGCTTCGCCGTTCGGACAT TCTGGCGCTATTGCTGCAGGATCGCCGTGCTTTTTTGCTGGCGGGTACGCACGGTAAGACTTCCACGACGTCGATGGCTG TCGCGGCGCTTCAGGCTGCAGGCCAGGACCCTTCCTTCGCCATCGGTGGCCAGCTGAACCGCGCGGGCACGAATGCCCAC AACGGCACCGGTGAAGTTTTCGTCGCGGAGGCCGACGAATCCGATGGGTCTTTCCTGTCCTACTCTCCTGAGATCGCGGT GGTTACGAACATAGAGCCCGACCACCTGGATTATTTCAAGACTGAATCTGCCTACCGCGAGGTCTTCGAAAAATTTGCTC ACCGCATTGTGCCGGGCGGCTTCCTGGTTGTGTGCCTCGACGATCCAGGTTCGGCAGCACTCGCCGAGGAGCTCATCGCC GGTGCCGAGGAAGGCAATCCCTTGCCGTTTACCGTCGTTGGTTATGGCACTGCCGAGGGGTGTGACGCCCACCCCTCCGT GCCCCCAGCAGCGATCATCGAAAGCACGGAGGTTACTGCCGAGGGCACAGTTTCTGCCCTGCGGCTGACCGAAGAAGTCA AGAAGGCAGCCGAGGAGGCGGCGGGAACTTACTCGCTGCGTGTGGCCATCCCAGGTATCCACATGGTGTTGAATGCTGCG GCCGCCGTACTGGGCAGCGTGCTGCTGGGCGCTGATGTGGATAAGGTCATCGCAGGTATCGGTGGTTTCGACGGTGTGCG CCGTCGCTTCGAGTACCACGGGACCCGTCAGGACGTGGAAGTCTACGACGATTACGCTCACCACCCGACCGAGGTTGCGG CTGTTTTAGCTGCGGCGCGTCAACGGGTGGAGGCACGCGGCGGGCGTATCGTGGCCGTTTTCCAGCCGCACCTCTACTCG CGCACGATGAACTTCGCCGACGAGTTTGCCGAGGCATTGTCCCTGGCCGATCAGGTAGTTTTGCTGGACATCTTCGGCGC CCGCGAAGAGCCCGTGGAGGGAGTGGATTCGCGCATCATCGGAAACAAGATCGACGCTTCCACCGACTGGGTTTTCGAAC CTGACTTCTCGAAGGTCTCCAGCGTAGTCGCCGGGCTGGTGCAGCCTGGCGACATGGTGCTGACGATTGGCGCGGGCACC GTGACGATGCTGGCGGACGAGATTCTACTGGAACTGGACCGTGGTGATCGCGGGTGA
Upstream 100 bases:
>100_bases CGGCCGAGAAGATCGCCGAGAAGATCATCGCAGCAGCCGACGCTTAAGCACCGTTCCCAATTATTCCCCCCTCCCTTTTA GAAAGGCATCTTCTTCCACG
Downstream 100 bases:
>100_bases GCAGGGCGTCAAAAATAGGCAACAAGAAGAAGCAGCAGAAGCAAAACCTGCCACGTAAGCGCCTGCAGCGATTGGTAGCA GGGCTGGTGGCTCTCGTCGT
Product: UDP-N-acetylmuramate--L-alanine ligase
Products: NA
Alternate protein names: UDP-N-acetylmuramoyl-L-alanine synthetase
Number of amino acids: Translated: 498; Mature: 497
Protein sequence:
>498_residues MSDQLQTTDLSRVHMVGIGGAGMSGIARILLDRGYQVSGSDMKESRSIMALRAAGAQIQVGHAEDNLRLSGEMPTVVVTS FAAIPQDNPELVGAREAGIPVLRRSDILALLLQDRRAFLLAGTHGKTSTTSMAVAALQAAGQDPSFAIGGQLNRAGTNAH NGTGEVFVAEADESDGSFLSYSPEIAVVTNIEPDHLDYFKTESAYREVFEKFAHRIVPGGFLVVCLDDPGSAALAEELIA GAEEGNPLPFTVVGYGTAEGCDAHPSVPPAAIIESTEVTAEGTVSALRLTEEVKKAAEEAAGTYSLRVAIPGIHMVLNAA AAVLGSVLLGADVDKVIAGIGGFDGVRRRFEYHGTRQDVEVYDDYAHHPTEVAAVLAAARQRVEARGGRIVAVFQPHLYS RTMNFADEFAEALSLADQVVLLDIFGAREEPVEGVDSRIIGNKIDASTDWVFEPDFSKVSSVVAGLVQPGDMVLTIGAGT VTMLADEILLELDRGDRG
Sequences:
>Translated_498_residues MSDQLQTTDLSRVHMVGIGGAGMSGIARILLDRGYQVSGSDMKESRSIMALRAAGAQIQVGHAEDNLRLSGEMPTVVVTS FAAIPQDNPELVGAREAGIPVLRRSDILALLLQDRRAFLLAGTHGKTSTTSMAVAALQAAGQDPSFAIGGQLNRAGTNAH NGTGEVFVAEADESDGSFLSYSPEIAVVTNIEPDHLDYFKTESAYREVFEKFAHRIVPGGFLVVCLDDPGSAALAEELIA GAEEGNPLPFTVVGYGTAEGCDAHPSVPPAAIIESTEVTAEGTVSALRLTEEVKKAAEEAAGTYSLRVAIPGIHMVLNAA AAVLGSVLLGADVDKVIAGIGGFDGVRRRFEYHGTRQDVEVYDDYAHHPTEVAAVLAAARQRVEARGGRIVAVFQPHLYS RTMNFADEFAEALSLADQVVLLDIFGAREEPVEGVDSRIIGNKIDASTDWVFEPDFSKVSSVVAGLVQPGDMVLTIGAGT VTMLADEILLELDRGDRG >Mature_497_residues SDQLQTTDLSRVHMVGIGGAGMSGIARILLDRGYQVSGSDMKESRSIMALRAAGAQIQVGHAEDNLRLSGEMPTVVVTSF AAIPQDNPELVGAREAGIPVLRRSDILALLLQDRRAFLLAGTHGKTSTTSMAVAALQAAGQDPSFAIGGQLNRAGTNAHN GTGEVFVAEADESDGSFLSYSPEIAVVTNIEPDHLDYFKTESAYREVFEKFAHRIVPGGFLVVCLDDPGSAALAEELIAG AEEGNPLPFTVVGYGTAEGCDAHPSVPPAAIIESTEVTAEGTVSALRLTEEVKKAAEEAAGTYSLRVAIPGIHMVLNAAA AVLGSVLLGADVDKVIAGIGGFDGVRRRFEYHGTRQDVEVYDDYAHHPTEVAAVLAAARQRVEARGGRIVAVFQPHLYSR TMNFADEFAEALSLADQVVLLDIFGAREEPVEGVDSRIIGNKIDASTDWVFEPDFSKVSSVVAGLVQPGDMVLTIGAGTV TMLADEILLELDRGDRG
Specific function: Cell wall formation
COG id: COG0773
COG function: function code M; UDP-N-acetylmuramate-alanine ligase
Gene ontology:
Cell location: Cytoplasm
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the MurCDEF family
Homologues:
Organism=Escherichia coli, GI1786279, Length=488, Percent_Identity=35.4508196721311, Blast_Score=233, Evalue=2e-62, Organism=Escherichia coli, GI1790680, Length=482, Percent_Identity=29.045643153527, Blast_Score=154, Evalue=2e-38,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): MURC_CORJK (Q4JW94)
Other databases:
- EMBL: CR931997 - RefSeq: YP_250531.1 - ProteinModelPortal: Q4JW94 - SMR: Q4JW94 - STRING: Q4JW94 - GeneID: 3432773 - GenomeReviews: CR931997_GR - KEGG: cjk:jk0751 - NMPDR: fig|306537.3.peg.1610 - eggNOG: COG0773 - HOGENOM: HBG476594 - OMA: YQPHRYS - ProtClustDB: PRK00421 - BioCyc: CJEI306537:JK0751-MONOMER - GO: GO:0005737 - HAMAP: MF_00046 - InterPro: IPR004101 - InterPro: IPR013221 - InterPro: IPR000713 - InterPro: IPR016040 - InterPro: IPR005758 - Gene3D: G3DSA:3.90.190.20 - Gene3D: G3DSA:3.40.1190.10 - Gene3D: G3DSA:3.40.50.720 - TIGRFAMs: TIGR01082
Pfam domain/function: PF01225 Mur_ligase; PF02875 Mur_ligase_C; PF08245 Mur_ligase_M; SSF53244 Mur_ligase_C; SSF53623 Mur_ligase_cen
EC number: =6.3.2.8
Molecular weight: Translated: 52582; Mature: 52451
Theoretical pI: Translated: 4.41; Mature: 4.41
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSDQLQTTDLSRVHMVGIGGAGMSGIARILLDRGYQVSGSDMKESRSIMALRAAGAQIQV CCCCCCCCCCCEEEEEEECCCCHHHHHHHHHHCCCCCCCCCHHHHHHEEEEEECCCEEEE GHAEDNLRLSGEMPTVVVTSFAAIPQDNPELVGAREAGIPVLRRSDILALLLQDRRAFLL ECCCCCEEECCCCCEEEEEHHHHCCCCCCCEECCHHCCCCEEEHHHHHHHHHHCCCEEEE AGTHGKTSTTSMAVAALQAAGQDPSFAIGGQLNRAGTNAHNGTGEVFVAEADESDGSFLS EECCCCCCHHHHHHHHHHHCCCCCCEEECCCCCCCCCCCCCCCCCEEEEECCCCCCCEEE YSPEIAVVTNIEPDHLDYFKTESAYREVFEKFAHRIVPGGFLVVCLDDPGSAALAEELIA ECCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHC GAEEGNPLPFTVVGYGTAEGCDAHPSVPPAAIIESTEVTAEGTVSALRLTEEVKKAAEEA CCCCCCCCCEEEEECCCCCCCCCCCCCCHHHHEECCCCCCCCHHHHHHHHHHHHHHHHHC AGTYSLRVAIPGIHMVLNAAAAVLGSVLLGADVDKVIAGIGGFDGVRRRFEYHGTRQDVE CCEEEEEEECCHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCHHHHHHHHHHCCCCCCHH VYDDYAHHPTEVAAVLAAARQRVEARGGRIVAVFQPHLYSRTMNFADEFAEALSLADQVV HHHCCCCCHHHHHHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHEE LLDIFGAREEPVEGVDSRIIGNKIDASTDWVFEPDFSKVSSVVAGLVQPGDMVLTIGAGT EEEECCCCCCCCCCHHHHHCCCCCCCCCCCEECCCHHHHHHHHHHHCCCCCEEEEECCCH VTMLADEILLELDRGDRG HHHHHHHHHHEECCCCCC >Mature Secondary Structure SDQLQTTDLSRVHMVGIGGAGMSGIARILLDRGYQVSGSDMKESRSIMALRAAGAQIQV CCCCCCCCCCEEEEEEECCCCHHHHHHHHHHCCCCCCCCCHHHHHHEEEEEECCCEEEE GHAEDNLRLSGEMPTVVVTSFAAIPQDNPELVGAREAGIPVLRRSDILALLLQDRRAFLL ECCCCCEEECCCCCEEEEEHHHHCCCCCCCEECCHHCCCCEEEHHHHHHHHHHCCCEEEE AGTHGKTSTTSMAVAALQAAGQDPSFAIGGQLNRAGTNAHNGTGEVFVAEADESDGSFLS EECCCCCCHHHHHHHHHHHCCCCCCEEECCCCCCCCCCCCCCCCCEEEEECCCCCCCEEE YSPEIAVVTNIEPDHLDYFKTESAYREVFEKFAHRIVPGGFLVVCLDDPGSAALAEELIA ECCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHC GAEEGNPLPFTVVGYGTAEGCDAHPSVPPAAIIESTEVTAEGTVSALRLTEEVKKAAEEA CCCCCCCCCEEEEECCCCCCCCCCCCCCHHHHEECCCCCCCCHHHHHHHHHHHHHHHHHC AGTYSLRVAIPGIHMVLNAAAAVLGSVLLGADVDKVIAGIGGFDGVRRRFEYHGTRQDVE CCEEEEEEECCHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCHHHHHHHHHHCCCCCCHH VYDDYAHHPTEVAAVLAAARQRVEARGGRIVAVFQPHLYSRTMNFADEFAEALSLADQVV HHHCCCCCHHHHHHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHEE LLDIFGAREEPVEGVDSRIIGNKIDASTDWVFEPDFSKVSSVVAGLVQPGDMVLTIGAGT EEEECCCCCCCCCCHHHHHCCCCCCCCCCCEECCCHHHHHHHHHHHCCCCCEEEEECCCH VTMLADEILLELDRGDRG HHHHHHHHHHEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA