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The map label for this gene is ydgJ [H]

Identifier: 66767062

GI number: 66767062

Start: 870904

End: 871962

Strand: Reverse

Name: ydgJ [H]

Synonym: XC_0726

Alternate gene names: 66767062

Gene position: 871962-870904 (Counterclockwise)

Preceding gene: 66767068

Following gene: 66767053

Centisome position: 16.94

GC content: 68.74

Gene sequence:

>1059_bases
ATGCCTAAACCATTCAATCTGGCCGTCGTCGGCTATGGCTATGTTGGCCGCACCTTCCACGCACCGCTGATCGCCAGCAC
GCCCGGCCTGCAGTTGCACAGCGTGGTGTCGTCCAAGCCGCAGCAACCGCAGGCGGACTTCCGCGAGGTGCGCGTGCTGC
CCGACCTGGAGGCTGCACTGGCCGACCCGGCGCTGGATGCGGTGGTCATCGCCACGCCCAACCAGACCCATGCGCCCATG
GCGCTGCAGGCACTGGCGGCCGGCAAGCACGTGCTGGTGGATAAACCCTTCGCCCTGGATGCCGCACAGGCTCGCACCGT
GGTGGACGCCGCCGCAGAGGCCGGCAAGATCGTCAGCGTGTTCCAGAACCGCCGTTGGGATGCGGACTTCCTCACCGTGC
GGCGCTTGATCGAAGACGGCCAACTGGGCGAGGTGGTGGAGTTCCATTCGCACTTCGACCGGTATCGCCCGCAGGTGCGC
GACCGCTGGCGCGAAAGCGATATCCCCGGCGCCGGGCTGTGGTACGACCTGGGGCCGCATCTGCTGGACCAGGCGTTGCA
GTTGTTCGGCATGCCGCAGGCGATCAGCGCAGACCTGCAGCGCCAGCGCACCCAGGCGCGCAGCGACGATTACTTCAACG
TGGTGCTGCGCTATCCCCGCTTGCGGGTGATCCTGCACGCCGGCTCGCTGGTGGCCGACGGCAGCCTGCGCTTCGCCGTG
CACGGCACGCGCGGCAGCTATCTCAAGCATGGCGCCGATACGCAGGAAGACCAGTTGCGTGCCGGCCGCCGGCCCGGCAC
CGCCGGCTGGGGCATGGACCCATTGCCCGGCACGCTCACCCGCGTGGACGACGAAGGCCGTGTGCACACGCATCAGCCCG
ATGGCGTACCCGGCGACTACCGCCATTGCTATGCGGCCTTCCGCGACGCAATGGCCGGCACCGCACCGCCACCGGTCAGT
GCTGCCGACGCGGTGCGGCTGATGGAGCTGCTGGAGCTGGCGCAACGCGGTGCTGCGCTGGGCCAGGTGCTCTGGCTGGA
AGGCAACAGCAGCGACTGA

Upstream 100 bases:

>100_bases
CGCGGATGTGACCGCTGGATGCAGAGTTCGTGAACCCGGCGCACACGGGTGGGTGCAATACCATGCAGGTCTTCCCCAGC
GTTGCGGTGAATCGTTTTCA

Downstream 100 bases:

>100_bases
GCGCCAAGGCCCGGCAGCGGCGGTGCCGCGCTCACCGCGCGCGGCTGCTGCCACGCGCACACGCTGTTGTTGAAGCAGAC
ATGCATGCCACGCCAAGCGT

Product: oxidoreductase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 352; Mature: 351

Protein sequence:

>352_residues
MPKPFNLAVVGYGYVGRTFHAPLIASTPGLQLHSVVSSKPQQPQADFREVRVLPDLEAALADPALDAVVIATPNQTHAPM
ALQALAAGKHVLVDKPFALDAAQARTVVDAAAEAGKIVSVFQNRRWDADFLTVRRLIEDGQLGEVVEFHSHFDRYRPQVR
DRWRESDIPGAGLWYDLGPHLLDQALQLFGMPQAISADLQRQRTQARSDDYFNVVLRYPRLRVILHAGSLVADGSLRFAV
HGTRGSYLKHGADTQEDQLRAGRRPGTAGWGMDPLPGTLTRVDDEGRVHTHQPDGVPGDYRHCYAAFRDAMAGTAPPPVS
AADAVRLMELLELAQRGAALGQVLWLEGNSSD

Sequences:

>Translated_352_residues
MPKPFNLAVVGYGYVGRTFHAPLIASTPGLQLHSVVSSKPQQPQADFREVRVLPDLEAALADPALDAVVIATPNQTHAPM
ALQALAAGKHVLVDKPFALDAAQARTVVDAAAEAGKIVSVFQNRRWDADFLTVRRLIEDGQLGEVVEFHSHFDRYRPQVR
DRWRESDIPGAGLWYDLGPHLLDQALQLFGMPQAISADLQRQRTQARSDDYFNVVLRYPRLRVILHAGSLVADGSLRFAV
HGTRGSYLKHGADTQEDQLRAGRRPGTAGWGMDPLPGTLTRVDDEGRVHTHQPDGVPGDYRHCYAAFRDAMAGTAPPPVS
AADAVRLMELLELAQRGAALGQVLWLEGNSSD
>Mature_351_residues
PKPFNLAVVGYGYVGRTFHAPLIASTPGLQLHSVVSSKPQQPQADFREVRVLPDLEAALADPALDAVVIATPNQTHAPMA
LQALAAGKHVLVDKPFALDAAQARTVVDAAAEAGKIVSVFQNRRWDADFLTVRRLIEDGQLGEVVEFHSHFDRYRPQVRD
RWRESDIPGAGLWYDLGPHLLDQALQLFGMPQAISADLQRQRTQARSDDYFNVVLRYPRLRVILHAGSLVADGSLRFAVH
GTRGSYLKHGADTQEDQLRAGRRPGTAGWGMDPLPGTLTRVDDEGRVHTHQPDGVPGDYRHCYAAFRDAMAGTAPPPVSA
ADAVRLMELLELAQRGAALGQVLWLEGNSSD

Specific function: Unknown

COG id: COG0673

COG function: function code R; Predicted dehydrogenases and related proteins

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the gfo/idh/mocA family [H]

Homologues:

Organism=Escherichia coli, GI87081947, Length=338, Percent_Identity=50.5917159763314, Blast_Score=328, Evalue=3e-91,
Organism=Escherichia coli, GI1789848, Length=330, Percent_Identity=35.1515151515151, Blast_Score=204, Evalue=7e-54,
Organism=Escherichia coli, GI1787574, Length=216, Percent_Identity=29.1666666666667, Blast_Score=88, Evalue=9e-19,
Organism=Escherichia coli, GI87082405, Length=258, Percent_Identity=25.5813953488372, Blast_Score=72, Evalue=5e-14,
Organism=Saccharomyces cerevisiae, GI6323975, Length=258, Percent_Identity=25.1937984496124, Blast_Score=65, Evalue=2e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016040
- InterPro:   IPR000683
- InterPro:   IPR004104 [H]

Pfam domain/function: PF01408 GFO_IDH_MocA; PF02894 GFO_IDH_MocA_C [H]

EC number: 1.-.-.- [C]

Molecular weight: Translated: 38503; Mature: 38372

Theoretical pI: Translated: 6.71; Mature: 6.71

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPKPFNLAVVGYGYVGRTFHAPLIASTPGLQLHSVVSSKPQQPQADFREVRVLPDLEAAL
CCCCEEEEEEECCCCCCHHCCCCEECCCCCHHHHHHHCCCCCCCHHHHHHHCCCCHHHHH
ADPALDAVVIATPNQTHAPMALQALAAGKHVLVDKPFALDAAQARTVVDAAAEAGKIVSV
CCCCCCEEEEECCCCCCCHHHHHHHHCCCEEEECCCCCCCHHHHHHHHHHHHHCCHHHHH
FQNRRWDADFLTVRRLIEDGQLGEVVEFHSHFDRYRPQVRDRWRESDIPGAGLWYDLGPH
HHCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHCHHHHHHHHHCCCCCCCCHHHCCHH
LLDQALQLFGMPQAISADLQRQRTQARSDDYFNVVLRYPRLRVILHAGSLVADGSLRFAV
HHHHHHHHHCCCHHHHHHHHHHHHHHCCCCHHHHEECCCCEEEEEECCCEEECCCEEEEE
HGTRGSYLKHGADTQEDQLRAGRRPGTAGWGMDPLPGTLTRVDDEGRVHTHQPDGVPGDY
ECCCCCHHHCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCEEECCCCCEECCCCCCCCCHH
RHCYAAFRDAMAGTAPPPVSAADAVRLMELLELAQRGAALGQVLWLEGNSSD
HHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCHHCEEEEEECCCCC
>Mature Secondary Structure 
PKPFNLAVVGYGYVGRTFHAPLIASTPGLQLHSVVSSKPQQPQADFREVRVLPDLEAAL
CCCEEEEEEECCCCCCHHCCCCEECCCCCHHHHHHHCCCCCCCHHHHHHHCCCCHHHHH
ADPALDAVVIATPNQTHAPMALQALAAGKHVLVDKPFALDAAQARTVVDAAAEAGKIVSV
CCCCCCEEEEECCCCCCCHHHHHHHHCCCEEEECCCCCCCHHHHHHHHHHHHHCCHHHHH
FQNRRWDADFLTVRRLIEDGQLGEVVEFHSHFDRYRPQVRDRWRESDIPGAGLWYDLGPH
HHCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHCHHHHHHHHHCCCCCCCCHHHCCHH
LLDQALQLFGMPQAISADLQRQRTQARSDDYFNVVLRYPRLRVILHAGSLVADGSLRFAV
HHHHHHHHHCCCHHHHHHHHHHHHHHCCCCHHHHEECCCCEEEEEECCCEEECCCEEEEE
HGTRGSYLKHGADTQEDQLRAGRRPGTAGWGMDPLPGTLTRVDDEGRVHTHQPDGVPGDY
ECCCCCHHHCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCEEECCCCCEECCCCCCCCCHH
RHCYAAFRDAMAGTAPPPVSAADAVRLMELLELAQRGAALGQVLWLEGNSSD
HHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCHHCEEEEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9097039; 9278503 [H]