| Definition | Xanthomonas campestris pv. campestris str. 8004 chromosome, complete genome. |
|---|---|
| Accession | NC_007086 |
| Length | 5,148,708 |
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The map label for this gene is 66767053
Identifier: 66767053
GI number: 66767053
Start: 861227
End: 862093
Strand: Reverse
Name: 66767053
Synonym: XC_0717
Alternate gene names: NA
Gene position: 862093-861227 (Counterclockwise)
Preceding gene: 66767062
Following gene: 66767051
Centisome position: 16.74
GC content: 64.94
Gene sequence:
>867_bases ATGCCACGCCTGACCACGCGCGCGCTGACGCGCTGCTTGCTTGCCACCCTTGCACTGCTGTGCATCGCCTTGCCGGCACT TGCCGCAGCGCCAATCACGCCGTTGCGTGTGATGTCATTCAATGTGCGCGTGCCCGTCGATACCGATGGCGACAAACGCT GGCAGGCGCGTCGCGGTGCGATGGTCAGCGTGATCAAGCAGACGCATCCGGATGTGTTCGGCACCCAGGAACTGGTCAGC GAGCAAGCCGGCTATCTGGCCGCGCAGTTGCCTAACTACCGCTGGTTCGGCCAGGGACGGCGCGGTGATGACAGCGACGA ACACATGGGCGTGTTCTACGACACGCGCACGCTCAACGTGGTGGAATCGGGCAACTTCTGGCTGTCCGATACGCCCGAGG TGGCCGGCAGCATCACCTGGGGCAACGTGTTGCCGCGCATGGTCACCTGGGCGTTGTTCGAGCGCCGCAGCGACAAGCGC CGCTTCTATCTGTTCAACACGCATTTCCCGTACCGCGACGAAGATGAACCCGCGCGCGAACACAGCGCGCGACTGATCCT GTCGCGCATCGCGCAATTGCCGGCCGATATTCCGGTGGTGCTGACCGGCGACTTCAACAGTGACCCGGACAAGATCACCT ATCCCACGCTCACCGCCGTGCTGGGCGACGCACGCGCGAGGGCGCCTAAGCGCAGCGGGCCGGAGAACACCTTCCAGGAT TTCAGCACCCATCCCACCCGGCGGATCGACTGGATCCTGTTCCGCGGGCTGACGCCAACGCAGTTCACCACGCTGGATGA CCGGCCCGGCGGCGTGCTGCCGTCGGATCATTATCCGGTGCTCGCCGAGTTTGCCTGGCCGCGCTGA
Upstream 100 bases:
>100_bases CAAGCGCGCGATCGCATCGGCAAACACCGGCGTTGCCATGACACAGCGGTCATCGTCGCTGACTAGACTTGGCGGCTCTG TTCTTCAGGAATTTGCCTGC
Downstream 100 bases:
>100_bases AAGCGCGCGCTTCAATCACTGCTTCGCAGGCATCGGCGCGCACGGAGTGAGCGCGCCGATGCCTGCGAAACAGCCGGCAA TCACGGTGGCCGGATGCCCG
Product: hypothetical protein
Products: NA
Alternate protein names: Endonuclease/Exonuclease/Phosphatase Family Protein; Endonuclease/Exonuclease/Phosphatase Family; Metal-Dependent Hydrolase; Secreted Protein
Number of amino acids: Translated: 288; Mature: 287
Protein sequence:
>288_residues MPRLTTRALTRCLLATLALLCIALPALAAAPITPLRVMSFNVRVPVDTDGDKRWQARRGAMVSVIKQTHPDVFGTQELVS EQAGYLAAQLPNYRWFGQGRRGDDSDEHMGVFYDTRTLNVVESGNFWLSDTPEVAGSITWGNVLPRMVTWALFERRSDKR RFYLFNTHFPYRDEDEPAREHSARLILSRIAQLPADIPVVLTGDFNSDPDKITYPTLTAVLGDARARAPKRSGPENTFQD FSTHPTRRIDWILFRGLTPTQFTTLDDRPGGVLPSDHYPVLAEFAWPR
Sequences:
>Translated_288_residues MPRLTTRALTRCLLATLALLCIALPALAAAPITPLRVMSFNVRVPVDTDGDKRWQARRGAMVSVIKQTHPDVFGTQELVS EQAGYLAAQLPNYRWFGQGRRGDDSDEHMGVFYDTRTLNVVESGNFWLSDTPEVAGSITWGNVLPRMVTWALFERRSDKR RFYLFNTHFPYRDEDEPAREHSARLILSRIAQLPADIPVVLTGDFNSDPDKITYPTLTAVLGDARARAPKRSGPENTFQD FSTHPTRRIDWILFRGLTPTQFTTLDDRPGGVLPSDHYPVLAEFAWPR >Mature_287_residues PRLTTRALTRCLLATLALLCIALPALAAAPITPLRVMSFNVRVPVDTDGDKRWQARRGAMVSVIKQTHPDVFGTQELVSE QAGYLAAQLPNYRWFGQGRRGDDSDEHMGVFYDTRTLNVVESGNFWLSDTPEVAGSITWGNVLPRMVTWALFERRSDKRR FYLFNTHFPYRDEDEPAREHSARLILSRIAQLPADIPVVLTGDFNSDPDKITYPTLTAVLGDARARAPKRSGPENTFQDF STHPTRRIDWILFRGLTPTQFTTLDDRPGGVLPSDHYPVLAEFAWPR
Specific function: Unknown
COG id: COG3568
COG function: function code R; Metal-dependent hydrolase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 32569; Mature: 32438
Theoretical pI: Translated: 8.23; Mature: 8.23
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPRLTTRALTRCLLATLALLCIALPALAAAPITPLRVMSFNVRVPVDTDGDKRWQARRGA CCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEEEEECCCCCCHHHHHHHHH MVSVIKQTHPDVFGTQELVSEQAGYLAAQLPNYRWFGQGRRGDDSDEHMGVFYDTRTLNV HHHHHHHHCCCCCCHHHHHHHHHCEEEHHCCCCEEECCCCCCCCCCCCEEEEEECEEEEE VESGNFWLSDTPEVAGSITWGNVLPRMVTWALFERRSDKRRFYLFNTHFPYRDEDEPARE EECCCEEECCCHHHHCCCCHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCHHHH HSARLILSRIAQLPADIPVVLTGDFNSDPDKITYPTLTAVLGDARARAPKRSGPENTFQD HHHHHHHHHHHHCCCCCCEEEECCCCCCCCCEEHHHHHHHHHHHHHCCCCCCCCCHHHHH FSTHPTRRIDWILFRGLTPTQFTTLDDRPGGVLPSDHYPVLAEFAWPR HCCCCCCEEEEEEECCCCCCEEEECCCCCCCCCCCCCCCEEECCCCCC >Mature Secondary Structure PRLTTRALTRCLLATLALLCIALPALAAAPITPLRVMSFNVRVPVDTDGDKRWQARRGA CCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEEEEECCCCCCHHHHHHHHH MVSVIKQTHPDVFGTQELVSEQAGYLAAQLPNYRWFGQGRRGDDSDEHMGVFYDTRTLNV HHHHHHHHCCCCCCHHHHHHHHHCEEEHHCCCCEEECCCCCCCCCCCCEEEEEECEEEEE VESGNFWLSDTPEVAGSITWGNVLPRMVTWALFERRSDKRRFYLFNTHFPYRDEDEPARE EECCCEEECCCHHHHCCCCHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCHHHH HSARLILSRIAQLPADIPVVLTGDFNSDPDKITYPTLTAVLGDARARAPKRSGPENTFQD HHHHHHHHHHHHCCCCCCEEEECCCCCCCCCEEHHHHHHHHHHHHHCCCCCCCCCHHHHH FSTHPTRRIDWILFRGLTPTQFTTLDDRPGGVLPSDHYPVLAEFAWPR HCCCCCCEEEEEEECCCCCCEEEECCCCCCCCCCCCCCCEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA