Click here to switch to the map view.

The map label for this gene is insF1 [C]

Identifier: 66767002

GI number: 66767002

Start: 799480

End: 800334

Strand: Reverse

Name: insF1 [C]

Synonym: XC_0665

Alternate gene names: 66767002

Gene position: 800334-799480 (Counterclockwise)

Preceding gene: 66767003

Following gene: 66766995

Centisome position: 15.54

GC content: 60.7

Gene sequence:

>855_bases
ATGCAAGCCCACTGCGGGGAATTCAGGGTGTGTGCAATGTGCCGGGTATTGCGGGTCAACCGGTCGGGTTATTACGCTTG
GTTGTGCTCGCCCAACAGTGAGCGCGCCAAGGAAGATGATCGCTTGCTTGGACTAATCAAGCACCACTGGCTGGCCAGCG
GCAGTGTCTATGGGCATCGCAAGATCACCACGGATCTGCGCGATCTGGGTGAGCGTTGTAGTCGTCATCGGGTGCATCGG
CTGATGCGCACCGAGGGACTGCGTGCCCAGGTGGGCTATGGTCGCAAACCGCGCTTCCATGGAGGAATGCAGTGCAAGGC
GGCGGCCAACCTGCTTGACCGACAGTTCGACGTGACGGAGCCGGACACGGCCTGGGCGAGCGATTTCACCTTCATCCGCA
CGCATGAAGGCTGGATGTATTTGGCTGTTGTGATCGATCTGTTTTCCAGGCAGGTCGTCGGCTGGGCGATGCGCGATCGG
GCCGACACCGAGTTGGTCGTGCAGGCGGTGTTGTCTGCGGTGTGGCGGCGCAAACCCAACGCTGGTTGCTTGGTTCATTC
GGACCAAGGGTCTGTCTACACCAGCGATGACTGGCGCAGTTTCCTGGCGTCCCATGGCTTGGTGTGCAGCATGAGTCGGC
GTGGCAACTGCCACGACAACGCACCCGTGGAGAGCTTCTTCGGCCTGCTCAAACGCGAGCGGATCAGGCGGCTGACCTAT
CCCACCAAGGACGCCGCTCGCGCCGAGGTATTCGACTACATCGAGATGTTCTACAACCCCAACCGCCGCCACGGTTCAAC
TGGCGACCTGTCACCTGTAGAGTTTGAACGGCGCTACGCGCAACGAGGGTCTTGA

Upstream 100 bases:

>100_bases
GGCGGCTGAAGGCAGAGTTGCGTCGAGTGACCGAGGAGCGCGACATCCTAAAAAAGGCCGCCGCGTACTTTGCCAAGGGG
TAAAGGCAAAGTACGCCTTC

Downstream 100 bases:

>100_bases
GTGTCTACGGAACCCTGGGCGTATCAGACACAGCGAACTCTGAGGTTCTCCAACTTTCCCAAGACGCCAAGCAGCGTCTG
CACAGGGACCCTCACCCCAA

Product: ISxac3 transposase

Products: NA

Alternate protein names: ISO-S3 31 kDa protein [H]

Number of amino acids: Translated: 284; Mature: 284

Protein sequence:

>284_residues
MQAHCGEFRVCAMCRVLRVNRSGYYAWLCSPNSERAKEDDRLLGLIKHHWLASGSVYGHRKITTDLRDLGERCSRHRVHR
LMRTEGLRAQVGYGRKPRFHGGMQCKAAANLLDRQFDVTEPDTAWASDFTFIRTHEGWMYLAVVIDLFSRQVVGWAMRDR
ADTELVVQAVLSAVWRRKPNAGCLVHSDQGSVYTSDDWRSFLASHGLVCSMSRRGNCHDNAPVESFFGLLKRERIRRLTY
PTKDAARAEVFDYIEMFYNPNRRHGSTGDLSPVEFERRYAQRGS

Sequences:

>Translated_284_residues
MQAHCGEFRVCAMCRVLRVNRSGYYAWLCSPNSERAKEDDRLLGLIKHHWLASGSVYGHRKITTDLRDLGERCSRHRVHR
LMRTEGLRAQVGYGRKPRFHGGMQCKAAANLLDRQFDVTEPDTAWASDFTFIRTHEGWMYLAVVIDLFSRQVVGWAMRDR
ADTELVVQAVLSAVWRRKPNAGCLVHSDQGSVYTSDDWRSFLASHGLVCSMSRRGNCHDNAPVESFFGLLKRERIRRLTY
PTKDAARAEVFDYIEMFYNPNRRHGSTGDLSPVEFERRYAQRGS
>Mature_284_residues
MQAHCGEFRVCAMCRVLRVNRSGYYAWLCSPNSERAKEDDRLLGLIKHHWLASGSVYGHRKITTDLRDLGERCSRHRVHR
LMRTEGLRAQVGYGRKPRFHGGMQCKAAANLLDRQFDVTEPDTAWASDFTFIRTHEGWMYLAVVIDLFSRQVVGWAMRDR
ADTELVVQAVLSAVWRRKPNAGCLVHSDQGSVYTSDDWRSFLASHGLVCSMSRRGNCHDNAPVESFFGLLKRERIRRLTY
PTKDAARAEVFDYIEMFYNPNRRHGSTGDLSPVEFERRYAQRGS

Specific function: Involved in the transposition of the insertion sequence is3 [C]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 integrase catalytic domain [H]

Homologues:

Organism=Homo sapiens, GI310129419, Length=236, Percent_Identity=35.5932203389831, Blast_Score=125, Evalue=6e-29,
Organism=Escherichia coli, GI1788405, Length=280, Percent_Identity=40.3571428571429, Blast_Score=196, Evalue=2e-51,
Organism=Escherichia coli, GI1787263, Length=280, Percent_Identity=40.3571428571429, Blast_Score=196, Evalue=2e-51,
Organism=Escherichia coli, GI1786753, Length=280, Percent_Identity=40.3571428571429, Blast_Score=196, Evalue=2e-51,
Organism=Escherichia coli, GI1786570, Length=280, Percent_Identity=40.3571428571429, Blast_Score=196, Evalue=2e-51,
Organism=Escherichia coli, GI1786490, Length=280, Percent_Identity=40.3571428571429, Blast_Score=196, Evalue=2e-51,
Organism=Escherichia coli, GI1789981, Length=219, Percent_Identity=33.7899543378995, Blast_Score=130, Evalue=1e-31,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001584
- InterPro:   IPR012337 [H]

Pfam domain/function: PF00665 rve [H]

EC number: NA

Molecular weight: Translated: 32737; Mature: 32737

Theoretical pI: Translated: 9.58; Mature: 9.58

Prosite motif: PS50994 INTEGRASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.2 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
6.0 %Cys+Met (Translated Protein)
3.2 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
6.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQAHCGEFRVCAMCRVLRVNRSGYYAWLCSPNSERAKEDDRLLGLIKHHWLASGSVYGHR
CCCCCCCHHHHHHHHHHHCCCCCEEEEEECCCCHHCHHHHHHHHHHHHHHHCCCCCCCCH
KITTDLRDLGERCSRHRVHRLMRTEGLRAQVGYGRKPRFHGGMQCKAAANLLDRQFDVTE
HHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCCCCCCCCCHHHHHHHHHHCCCCCCC
PDTAWASDFTFIRTHEGWMYLAVVIDLFSRQVVGWAMRDRADTELVVQAVLSAVWRRKPN
CCCCHHCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCC
AGCLVHSDQGSVYTSDDWRSFLASHGLVCSMSRRGNCHDNAPVESFFGLLKRERIRRLTY
CCEEEECCCCCEEECHHHHHHHHHCCCEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHCC
PTKDAARAEVFDYIEMFYNPNRRHGSTGDLSPVEFERRYAQRGS
CCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHCCC
>Mature Secondary Structure
MQAHCGEFRVCAMCRVLRVNRSGYYAWLCSPNSERAKEDDRLLGLIKHHWLASGSVYGHR
CCCCCCCHHHHHHHHHHHCCCCCEEEEEECCCCHHCHHHHHHHHHHHHHHHCCCCCCCCH
KITTDLRDLGERCSRHRVHRLMRTEGLRAQVGYGRKPRFHGGMQCKAAANLLDRQFDVTE
HHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCCCCCCCCCHHHHHHHHHHCCCCCCC
PDTAWASDFTFIRTHEGWMYLAVVIDLFSRQVVGWAMRDRADTELVVQAVLSAVWRRKPN
CCCCHHCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCC
AGCLVHSDQGSVYTSDDWRSFLASHGLVCSMSRRGNCHDNAPVESFFGLLKRERIRRLTY
CCEEEECCCCCEEECHHHHHHHHHCCCEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHCC
PTKDAARAEVFDYIEMFYNPNRRHGSTGDLSPVEFERRYAQRGS
CCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2824781 [H]