| Definition | Xanthomonas campestris pv. campestris str. 8004 chromosome, complete genome. |
|---|---|
| Accession | NC_007086 |
| Length | 5,148,708 |
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The map label for this gene is ygeD [C]
Identifier: 66766844
GI number: 66766844
Start: 593067
End: 594989
Strand: Reverse
Name: ygeD [C]
Synonym: XC_0505
Alternate gene names: 66766844
Gene position: 594989-593067 (Counterclockwise)
Preceding gene: 66766845
Following gene: 66766843
Centisome position: 11.56
GC content: 65.0
Gene sequence:
>1923_bases ATGTCCGGTCACAGTCAGTTCGCCCTGCTCAGGCAGCGCCGCTTTTTGCCGTTTTTTACCGTGCAGGCGCTGGGCGCCTT CAACGACAACGTCTACCGGCAAGCCATCATCGGGCTGCTGTTCTACCTGGGCATCGACGCGGCGCAACGCACGCTCTACA CGAATCTGGCGCCGGCGCTGTTCATCCTGCCCTACTTCCTGTTCTCCGCCCTGGCCGGGCAGATCGCCGAGAAACTGGAA AAGCAGAAACTCATCGTGATCACCACCACCATGGAGATCGCGATCATGTCGCTGGCCGCGGTGGGCTTCATCACCGAGAA CATGGTGATCCTGCTGATCGCGCTGTTCTGCACCGGCCTGCAATCCACGCTGTTCGGGCCGGTGAAGTATTCGATCCTGC CCTCGGTGCTGAAGCCCGAGGAACTCACCGGCGGCAATGGCCTGGTCGAGATGGGCACCTCGATCTCGATCCTGTGCGGC ATGATCTTCGGCGGCTTGATCTTCCAGATCGCCGGCAGCCACGGCCCGGTGGCCGCTGCCACCGCAGTCATTGCCATTGC CGTCACCGGCAACCTGGTCGCGCGGCTGGTGCCCAAGGTCGATGCCGGCGCGCCGGAGTTGAAAATCAACTGGAACCCCA TCCCCGAATCGCGCGCGATCATGCGCCTGACCCGGCGCACGCCGGCGGTGCGCAACGCGGTGCTCGGAGTGTCGTGGTTC TGGTTCATCGGCACCGTACTGACCGCGCAGCTGCCCACCTATGCGCAGCTCAATCTCGGCGGCCAGCAGGACCTGTACGT GTTCGCGCTGGCGCTGTTTTCGATCGGCACCGGCGTCGGCTCGCTGCTGTGCGAGCGGCTGTCCGGGCGCACCGTGGAAA TCGGCCTGGTGCCGCTGGGCGCGTTCGGCATCAGCGCGTTCCTGCTGGATCTGTATTTCGCGCGTCCGGGTGCAGCACTG GCAAACGACCTGTCGATCGGCCAGTTCGTGCAGCAGGCCGGCAGCGTGCGGCTGATCGTGGACCTGGTCGGCATCGGTCT GTTCACTGGCCTGTTCGTGGTGCCGCTGTTCGCGCTGATCCAGAGCCGCACGCCCAAGGCCGAGCTGTCGCGCGTGATCG CCGGGCTCAACATCCAGAACTCGTTATTCATCGTCGCCGCGGCCATCATCGGTATCGCCCTGCAGCTGCCGCAGCTGGTG CTGTTCGGGGTGCGCATTCCACTGCCCGGGTTGAGCATTCCGCAGGTGTTCCTGGCGCTGGCAATCGCCAACACGCTGGT GGCGCTGTGGATCTTCACCCTGGTGCCCGAATTCCTGATGCGCTTCCTCAGCTGGGTGCTGGTGAGCGTGTTGTACCGGC TGCGTGCGCACGAGATCGATCGCCACGTGCCCGACGAAGGCGCCGCACTGCTGGTGTGCAACCACGTCAGCTACATGGAC GCGCTGATCCTCTCGGCGGTGATTCCGCGCCCGGTGCGCTTTGTCATGTACTACAAGATCTTCCGCATCCCGGTGATGCG CTGGATCTTCCGCACCGCCAAGGCCATCCCGATCGCCGGCGCGCGCGAAGACCCGGCACTCATGCAACAGGCTTTCGACC GCATCGATGCGGCGCTGGCCGACGGCGAGCTGGTCTGCATCTTTCCCGAAGGCGCATTGACCAAGGACGGCGAGATCGCG CCGTTCAAATCGGGTGTGGAAAAGATTCTCGAGCGGCGCCAGGTGCCGGTGATCCCGATGGCGCTGCGCGGCATGTGGTC GAGCATGTGGAGTCGGCGCGACACCCGCCTGGGCCGCATGCGCGTGCCGCGGCGGATACGGGCGCAGATTGAAGTGGTGG CCGGCCCGGCAATTGCCGGCGATCAGGCCAGCGCCGCGTTGCTCGAACAGCAGGTACGTGCACTACGCCAGGAGCACGCC TGA
Upstream 100 bases:
>100_bases CAGCAGCGCCCGGCGCGACGCCCGGTGCGCTGAGCCGCAGCGGGCGCTCCCAGCCCGGCGCTGAAGCCTGCTAGGCTGCG CGCGTCGCGAAGGAGTCCGC
Downstream 100 bases:
>100_bases CGGCCAGGGCGCGTGCGTGCCCTGCACTGGCGGGCGCTGGCTTTGCGTCCGCCGCGCCCGGCGAGTAGCCTGTGCGCCAT CGCACGTTTCGCGCCGCTGC
Product: 2-acylglycerophosphoethanolamine acyltransferase
Products: NA
Alternate protein names: 1-Acyl-Sn-Glycerol-3-Phosphate Acyltransferase; 2-Acyl-Glycerophospho-Ethanolamine Acyltransferase; Acylglycerophosphoethanolamine Acyltransferase; AMP-Dependent Synthetase And Ligase; Facilitator Transporter; Acyltransferase; Acyltransferase Family Protein; 1-Acylglycerol-3-Phosphate O-Acyltransferase; 2-Acylglycerophosphoethanolamine Acyltransferase; Transporter Facilitator Family; Facilitator Superfamily Protein; Acyltransferase Domain Protein; Acyl-CoA Synthetase /AMP-Acid Ligase II; Long-Chain-Fatty-Acid-[Acyl-Carrier-Protein] Ligase; Facilitator Superfamily Permease; 1-Acyl-Sn-Glycerol-3-Phosphateacyltransferase-Like Protein; Acyltransferase Protein; Transporter-Like Acyltransferase Protein; Acyltransferase Domain-Containing Protein; Transmembrane Protein; [Acyl-]Glycerolphosphate Acyltransferase; MFS Permease; 1-Acyl-Sn-Glycerol-3-Phosphate Acyltransferases; Inner Membrane Protein YgeD; Efflux Protein; Facilitator Superfamily Transmembrane Protein; Fatty Acid Permease / Acyltransferase Fusion Protein; L-Acyl-Sn-Glycerol-3-Phosphate Acetyltransferase; Long-Chain-Fatty-Acid CoA Ligase
Number of amino acids: Translated: 640; Mature: 639
Protein sequence:
>640_residues MSGHSQFALLRQRRFLPFFTVQALGAFNDNVYRQAIIGLLFYLGIDAAQRTLYTNLAPALFILPYFLFSALAGQIAEKLE KQKLIVITTTMEIAIMSLAAVGFITENMVILLIALFCTGLQSTLFGPVKYSILPSVLKPEELTGGNGLVEMGTSISILCG MIFGGLIFQIAGSHGPVAAATAVIAIAVTGNLVARLVPKVDAGAPELKINWNPIPESRAIMRLTRRTPAVRNAVLGVSWF WFIGTVLTAQLPTYAQLNLGGQQDLYVFALALFSIGTGVGSLLCERLSGRTVEIGLVPLGAFGISAFLLDLYFARPGAAL ANDLSIGQFVQQAGSVRLIVDLVGIGLFTGLFVVPLFALIQSRTPKAELSRVIAGLNIQNSLFIVAAAIIGIALQLPQLV LFGVRIPLPGLSIPQVFLALAIANTLVALWIFTLVPEFLMRFLSWVLVSVLYRLRAHEIDRHVPDEGAALLVCNHVSYMD ALILSAVIPRPVRFVMYYKIFRIPVMRWIFRTAKAIPIAGAREDPALMQQAFDRIDAALADGELVCIFPEGALTKDGEIA PFKSGVEKILERRQVPVIPMALRGMWSSMWSRRDTRLGRMRVPRRIRAQIEVVAGPAIAGDQASAALLEQQVRALRQEHA
Sequences:
>Translated_640_residues MSGHSQFALLRQRRFLPFFTVQALGAFNDNVYRQAIIGLLFYLGIDAAQRTLYTNLAPALFILPYFLFSALAGQIAEKLE KQKLIVITTTMEIAIMSLAAVGFITENMVILLIALFCTGLQSTLFGPVKYSILPSVLKPEELTGGNGLVEMGTSISILCG MIFGGLIFQIAGSHGPVAAATAVIAIAVTGNLVARLVPKVDAGAPELKINWNPIPESRAIMRLTRRTPAVRNAVLGVSWF WFIGTVLTAQLPTYAQLNLGGQQDLYVFALALFSIGTGVGSLLCERLSGRTVEIGLVPLGAFGISAFLLDLYFARPGAAL ANDLSIGQFVQQAGSVRLIVDLVGIGLFTGLFVVPLFALIQSRTPKAELSRVIAGLNIQNSLFIVAAAIIGIALQLPQLV LFGVRIPLPGLSIPQVFLALAIANTLVALWIFTLVPEFLMRFLSWVLVSVLYRLRAHEIDRHVPDEGAALLVCNHVSYMD ALILSAVIPRPVRFVMYYKIFRIPVMRWIFRTAKAIPIAGAREDPALMQQAFDRIDAALADGELVCIFPEGALTKDGEIA PFKSGVEKILERRQVPVIPMALRGMWSSMWSRRDTRLGRMRVPRRIRAQIEVVAGPAIAGDQASAALLEQQVRALRQEHA >Mature_639_residues SGHSQFALLRQRRFLPFFTVQALGAFNDNVYRQAIIGLLFYLGIDAAQRTLYTNLAPALFILPYFLFSALAGQIAEKLEK QKLIVITTTMEIAIMSLAAVGFITENMVILLIALFCTGLQSTLFGPVKYSILPSVLKPEELTGGNGLVEMGTSISILCGM IFGGLIFQIAGSHGPVAAATAVIAIAVTGNLVARLVPKVDAGAPELKINWNPIPESRAIMRLTRRTPAVRNAVLGVSWFW FIGTVLTAQLPTYAQLNLGGQQDLYVFALALFSIGTGVGSLLCERLSGRTVEIGLVPLGAFGISAFLLDLYFARPGAALA NDLSIGQFVQQAGSVRLIVDLVGIGLFTGLFVVPLFALIQSRTPKAELSRVIAGLNIQNSLFIVAAAIIGIALQLPQLVL FGVRIPLPGLSIPQVFLALAIANTLVALWIFTLVPEFLMRFLSWVLVSVLYRLRAHEIDRHVPDEGAALLVCNHVSYMDA LILSAVIPRPVRFVMYYKIFRIPVMRWIFRTAKAIPIAGAREDPALMQQAFDRIDAALADGELVCIFPEGALTKDGEIAP FKSGVEKILERRQVPVIPMALRGMWSSMWSRRDTRLGRMRVPRRIRAQIEVVAGPAIAGDQASAALLEQQVRALRQEHA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Integral Membrane Protein [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 69707; Mature: 69576
Theoretical pI: Translated: 10.09; Mature: 10.09
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSGHSQFALLRQRRFLPFFTVQALGAFNDNVYRQAIIGLLFYLGIDAAQRTLYTNLAPAL CCCCHHHHHHHHHCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH FILPYFLFSALAGQIAEKLEKQKLIVITTTMEIAIMSLAAVGFITENMVILLIALFCTGL HHHHHHHHHHHHHHHHHHHHHCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH QSTLFGPVKYSILPSVLKPEELTGGNGLVEMGTSISILCGMIFGGLIFQIAGSHGPVAAA HHHHCCCHHHHHHHHHCCCCCCCCCCCCEECCCHHHHHHHHHHHHHHHHHCCCCCCHHHH TAVIAIAVTGNLVARLVPKVDAGAPELKINWNPIPESRAIMRLTRRTPAVRNAVLGVSWF HHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCHHHHHHHHHCCHHHHHHHHHHHHH WFIGTVLTAQLPTYAQLNLGGQQDLYVFALALFSIGTGVGSLLCERLSGRTVEIGLVPLG HHHHHHHHHCCCCCEEECCCCCCHHHHHHHHHHHHHCCHHHHHHHHHCCCEEEEEEEEHH AFGISAFLLDLYFARPGAALANDLSIGQFVQQAGSVRLIVDLVGIGLFTGLFVVPLFALI HHHHHHHHHHHHHCCCCCHHHHCCHHHHHHHHCCCEEHHHHHHHHHHHHHHHHHHHHHHH QSRTPKAELSRVIAGLNIQNSLFIVAAAIIGIALQLPQLVLFGVRIPLPGLSIPQVFLAL HCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHH AIANTLVALWIFTLVPEFLMRFLSWVLVSVLYRLRAHEIDRHVPDEGAALLVCNHVSYMD HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECHHHHHH ALILSAVIPRPVRFVMYYKIFRIPVMRWIFRTAKAIPIAGAREDPALMQQAFDRIDAALA HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHC DGELVCIFPEGALTKDGEIAPFKSGVEKILERRQVPVIPMALRGMWSSMWSRRDTRLGRM CCCEEEEECCCCCCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHH RVPRRIRAQIEVVAGPAIAGDQASAALLEQQVRALRQEHA CCCHHHHHHEEEEECCCCCCCHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure SGHSQFALLRQRRFLPFFTVQALGAFNDNVYRQAIIGLLFYLGIDAAQRTLYTNLAPAL CCCHHHHHHHHHCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH FILPYFLFSALAGQIAEKLEKQKLIVITTTMEIAIMSLAAVGFITENMVILLIALFCTGL HHHHHHHHHHHHHHHHHHHHHCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH QSTLFGPVKYSILPSVLKPEELTGGNGLVEMGTSISILCGMIFGGLIFQIAGSHGPVAAA HHHHCCCHHHHHHHHHCCCCCCCCCCCCEECCCHHHHHHHHHHHHHHHHHCCCCCCHHHH TAVIAIAVTGNLVARLVPKVDAGAPELKINWNPIPESRAIMRLTRRTPAVRNAVLGVSWF HHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCHHHHHHHHHCCHHHHHHHHHHHHH WFIGTVLTAQLPTYAQLNLGGQQDLYVFALALFSIGTGVGSLLCERLSGRTVEIGLVPLG HHHHHHHHHCCCCCEEECCCCCCHHHHHHHHHHHHHCCHHHHHHHHHCCCEEEEEEEEHH AFGISAFLLDLYFARPGAALANDLSIGQFVQQAGSVRLIVDLVGIGLFTGLFVVPLFALI HHHHHHHHHHHHHCCCCCHHHHCCHHHHHHHHCCCEEHHHHHHHHHHHHHHHHHHHHHHH QSRTPKAELSRVIAGLNIQNSLFIVAAAIIGIALQLPQLVLFGVRIPLPGLSIPQVFLAL HCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHH AIANTLVALWIFTLVPEFLMRFLSWVLVSVLYRLRAHEIDRHVPDEGAALLVCNHVSYMD HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECHHHHHH ALILSAVIPRPVRFVMYYKIFRIPVMRWIFRTAKAIPIAGAREDPALMQQAFDRIDAALA HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHC DGELVCIFPEGALTKDGEIAPFKSGVEKILERRQVPVIPMALRGMWSSMWSRRDTRLGRM CCCEEEEECCCCCCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHH RVPRRIRAQIEVVAGPAIAGDQASAALLEQQVRALRQEHA CCCHHHHHHEEEEECCCCCCCHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA