| Definition | Xanthomonas campestris pv. campestris str. 8004 chromosome, complete genome. |
|---|---|
| Accession | NC_007086 |
| Length | 5,148,708 |
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The map label for this gene is mnmG [H]
Identifier: 66766732
GI number: 66766732
Start: 450928
End: 452832
Strand: Reverse
Name: mnmG [H]
Synonym: XC_0389
Alternate gene names: 66766732
Gene position: 452832-450928 (Counterclockwise)
Preceding gene: 66766733
Following gene: 66766731
Centisome position: 8.8
GC content: 67.56
Gene sequence:
>1905_bases ATGTCCGACTCCTTCTATCGCTACGACGTCATCGTGATTGGTGGCGGCCACGCCGGCACCGAGGCGGCGCTGGCGGCTGC CCGCGCCGGTGCACGCACGCTGTTGCTGACCCACAACATCGAGACCGTGGGCGCGATGAGCTGCAACCCGGCCATCGGTG GGATCGGCAAGGGGCACCTGGTCAAGGAGATCGACGCACTGGGCGGGGCGATGGCCAAGGCGGCGGACCTGGCCGGCATC CAGTGGCGCACCCTCAATGCCTCCAAGGGGCCGGCGGTGCGGGCCACCCGCTGCCAGGCAGACCGCAACCTGTACCGCAG CGCCATCCGCCGCATCGTCGAAGCGCAGCCCAACCTGACCGTGTTCCAGGCGGCAGTGGACGATCTGATCATCCACAACG GTGCCGCCGAAGGCGACAGCGTGCGTGGGGTGATCACCCAGACCGGGCTGCGCTTCGAGGCCACGGCCGTGGTCCTGACC GCAGGCACCTTCCTGGCCGGCAAGATCCATGTCGGCGAGACCCAATACGCGGCCGGGCGCATGGGCGACCCGCCGGCCAC CACGCTGGCAGCGCGTCTGCGCGAGCGCCCGTTCGCCATCGATCGCCTCAAGACCGGAACTCCGCCGCGTATTGATGGGC GTACCCTCGACTACACGATGATGGATGAGCAGCCAGGTGATGACCCGCTGCCGGTGATGTCGTTCATGGGCCAGGTCAGC GACCACCCGACCCAGGTCAGCTGCTGGATCACCCATACCACCGAGCAGACCCACGACATCATCCGTGGCGCGTTGCACCG CTCGCCGCTGTATTCGGGGCAGATCGAGGGCATTGGCCCGCGCTACTGCCCGTCGATCGAAGACAAGGTGGTGCGTTTCG CCGACAAGACCAGCCATCAGATCTTTGTCGAACCGGAAGGCCTGGACGTCACCGAGATCTATCCCAACGGTATTTCCACC TCGCTGCCGTTCGACGTGCAACTGGCGCTGGTGCGCTCGATCCGCGGTTTTGCGCAGGCGCATATCACCCGCCCGGGCTA CGCGATCGAGTACGACTTCTTCGACCCGCGCGGGCTCAAAGCCTCGCTGGAAACCAAGGCGGTGGGCGGGCTGTTCTTCG CCGGGCAGATCAACGGCACCACCGGTTACGAAGAAGCCGCCGCGCAGGGCCTGTTGGCCGGGCTCAACGCTGCACGCCAG GCGCAGGCGCTGCCGGCCTGGTCGCCGCGCCGCGACGAAGCCTACCTGGGCGTACTGGTGGACGACCTGATCACCCACGG CACCACCGAGCCGTACCGCATGTTCACCAGCCGCGCCGAATACCGGCTGCAGCTGCGCGAAGACAACGCCGATCTGCGGC TGACCGGCGTGGGCCGCGCCATGGGCCTGGTCGACGATGCGCGCTGGGCACGCTTTTCCAGCAAGCAGGAGGCGGTGCAG CGCGAAACTGCGCGCCTGTCGGCACTCTGGGCCACGCCGGGCAATGCCCTGGGCCGCGAGGTGGTCGACACCCTGGGCGT GCCGATGAGCCGCGAGACCAATGTGCTGGACCTGATCAAGCGCCCGGAACTCAGCTACGCCGCGCTGATGCGGGTGCCGA CGCTGGGCCCGGGCGTGGACGATGCGCAGGTCGCCGAACAAGTGGAAATCGGCGTCAAATACGCCGGTTACCTGAATCGT CAGCGCGACGAAATCGCCCGCCAGCAGCGCCACGAAACGACTCCGATCCCGGAAGGCTTCGACTACGCCGGCGTGCGTGG CCTGTCGATGGAAGTGCAGCAGAAACTTGAACGCGTGCGCCCGCAAAGTATCGGCCAGGCACAGCGCATTCCGGGCATGA CCCCGGCCGCGATCTCGCTGCTGCTGGTGCACCTGGAACGCGCGCGGCGCAGCCAGGTGGCGTGA
Upstream 100 bases:
>100_bases TGTGACTTTAGTCACATATTTCACGTGTTAATGCCGCAAACCGCCCTTCAGCCGCTACGTTCGCGGCCGCTGGTCTTCCT CCTGCTTCTGGTCCACGCCC
Downstream 100 bases:
>100_bases CGCTAGTGGTCGGTGCGCAGGACAGCGGCGGCGTGACGTCACACGCGCCGCCCCGGTCTTGAAGTCTGCATTGGCGTGAG TGACGGATGTTTCTGGCTGC
Product: tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA
Products: NA
Alternate protein names: Glucose-inhibited division protein A [H]
Number of amino acids: Translated: 634; Mature: 633
Protein sequence:
>634_residues MSDSFYRYDVIVIGGGHAGTEAALAAARAGARTLLLTHNIETVGAMSCNPAIGGIGKGHLVKEIDALGGAMAKAADLAGI QWRTLNASKGPAVRATRCQADRNLYRSAIRRIVEAQPNLTVFQAAVDDLIIHNGAAEGDSVRGVITQTGLRFEATAVVLT AGTFLAGKIHVGETQYAAGRMGDPPATTLAARLRERPFAIDRLKTGTPPRIDGRTLDYTMMDEQPGDDPLPVMSFMGQVS DHPTQVSCWITHTTEQTHDIIRGALHRSPLYSGQIEGIGPRYCPSIEDKVVRFADKTSHQIFVEPEGLDVTEIYPNGIST SLPFDVQLALVRSIRGFAQAHITRPGYAIEYDFFDPRGLKASLETKAVGGLFFAGQINGTTGYEEAAAQGLLAGLNAARQ AQALPAWSPRRDEAYLGVLVDDLITHGTTEPYRMFTSRAEYRLQLREDNADLRLTGVGRAMGLVDDARWARFSSKQEAVQ RETARLSALWATPGNALGREVVDTLGVPMSRETNVLDLIKRPELSYAALMRVPTLGPGVDDAQVAEQVEIGVKYAGYLNR QRDEIARQQRHETTPIPEGFDYAGVRGLSMEVQQKLERVRPQSIGQAQRIPGMTPAAISLLLVHLERARRSQVA
Sequences:
>Translated_634_residues MSDSFYRYDVIVIGGGHAGTEAALAAARAGARTLLLTHNIETVGAMSCNPAIGGIGKGHLVKEIDALGGAMAKAADLAGI QWRTLNASKGPAVRATRCQADRNLYRSAIRRIVEAQPNLTVFQAAVDDLIIHNGAAEGDSVRGVITQTGLRFEATAVVLT AGTFLAGKIHVGETQYAAGRMGDPPATTLAARLRERPFAIDRLKTGTPPRIDGRTLDYTMMDEQPGDDPLPVMSFMGQVS DHPTQVSCWITHTTEQTHDIIRGALHRSPLYSGQIEGIGPRYCPSIEDKVVRFADKTSHQIFVEPEGLDVTEIYPNGIST SLPFDVQLALVRSIRGFAQAHITRPGYAIEYDFFDPRGLKASLETKAVGGLFFAGQINGTTGYEEAAAQGLLAGLNAARQ AQALPAWSPRRDEAYLGVLVDDLITHGTTEPYRMFTSRAEYRLQLREDNADLRLTGVGRAMGLVDDARWARFSSKQEAVQ RETARLSALWATPGNALGREVVDTLGVPMSRETNVLDLIKRPELSYAALMRVPTLGPGVDDAQVAEQVEIGVKYAGYLNR QRDEIARQQRHETTPIPEGFDYAGVRGLSMEVQQKLERVRPQSIGQAQRIPGMTPAAISLLLVHLERARRSQVA >Mature_633_residues SDSFYRYDVIVIGGGHAGTEAALAAARAGARTLLLTHNIETVGAMSCNPAIGGIGKGHLVKEIDALGGAMAKAADLAGIQ WRTLNASKGPAVRATRCQADRNLYRSAIRRIVEAQPNLTVFQAAVDDLIIHNGAAEGDSVRGVITQTGLRFEATAVVLTA GTFLAGKIHVGETQYAAGRMGDPPATTLAARLRERPFAIDRLKTGTPPRIDGRTLDYTMMDEQPGDDPLPVMSFMGQVSD HPTQVSCWITHTTEQTHDIIRGALHRSPLYSGQIEGIGPRYCPSIEDKVVRFADKTSHQIFVEPEGLDVTEIYPNGISTS LPFDVQLALVRSIRGFAQAHITRPGYAIEYDFFDPRGLKASLETKAVGGLFFAGQINGTTGYEEAAAQGLLAGLNAARQA QALPAWSPRRDEAYLGVLVDDLITHGTTEPYRMFTSRAEYRLQLREDNADLRLTGVGRAMGLVDDARWARFSSKQEAVQR ETARLSALWATPGNALGREVVDTLGVPMSRETNVLDLIKRPELSYAALMRVPTLGPGVDDAQVAEQVEIGVKYAGYLNRQ RDEIARQQRHETTPIPEGFDYAGVRGLSMEVQQKLERVRPQSIGQAQRIPGMTPAAISLLLVHLERARRSQVA
Specific function: NAD-binding protein involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA-cmnm(5)s(2)U34 [H]
COG id: COG0445
COG function: function code D; NAD/FAD-utilizing enzyme apparently involved in cell division
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the MnmG family [H]
Homologues:
Organism=Homo sapiens, GI74024895, Length=649, Percent_Identity=44.8382126348228, Blast_Score=490, Evalue=1e-138, Organism=Homo sapiens, GI19882217, Length=674, Percent_Identity=43.1750741839763, Blast_Score=476, Evalue=1e-134, Organism=Homo sapiens, GI183227703, Length=689, Percent_Identity=42.2351233671988, Blast_Score=471, Evalue=1e-132, Organism=Escherichia coli, GI2367273, Length=620, Percent_Identity=65.6451612903226, Blast_Score=830, Evalue=0.0, Organism=Caenorhabditis elegans, GI17534255, Length=624, Percent_Identity=40.224358974359, Blast_Score=454, Evalue=1e-128, Organism=Saccharomyces cerevisiae, GI6321202, Length=637, Percent_Identity=44.2700156985871, Blast_Score=511, Evalue=1e-146, Organism=Drosophila melanogaster, GI24658174, Length=640, Percent_Identity=44.0625, Blast_Score=488, Evalue=1e-138,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004416 - InterPro: IPR002218 - InterPro: IPR020595 [H]
Pfam domain/function: PF01134 GIDA [H]
EC number: NA
Molecular weight: Translated: 68880; Mature: 68749
Theoretical pI: Translated: 7.04; Mature: 7.04
Prosite motif: PS01280 GIDA_1 ; PS01281 GIDA_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSDSFYRYDVIVIGGGHAGTEAALAAARAGARTLLLTHNIETVGAMSCNPAIGGIGKGHL CCCCEEEEEEEEEECCCCCHHHHHHHHHCCCEEEEEEECCCEECCCCCCCCCCCCCCCHH VKEIDALGGAMAKAADLAGIQWRTLNASKGPAVRATRCQADRNLYRSAIRRIVEAQPNLT HHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCE VFQAAVDDLIIHNGAAEGDSVRGVITQTGLRFEATAVVLTAGTFLAGKIHVGETQYAAGR EHHHHHHHHHEECCCCCCCCCEEEHHHCCCEEEEEEEEEEECCEEEEEEEECCCHHCCCC MGDPPATTLAARLRERPFAIDRLKTGTPPRIDGRTLDYTMMDEQPGDDPLPVMSFMGQVS CCCCHHHHHHHHHHHCCCCHHHCCCCCCCCCCCCEEEEEEECCCCCCCCCHHHHHHHHHC DHPTQVSCWITHTTEQTHDIIRGALHRSPLYSGQIEGIGPRYCPSIEDKVVRFADKTSHQ CCCCEEEEEEEECCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCE IFVEPEGLDVTEIYPNGISTSLPFDVQLALVRSIRGFAQAHITRPGYAIEYDFFDPRGLK EEECCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCC ASLETKAVGGLFFAGQINGTTGYEEAAAQGLLAGLNAARQAQALPAWSPRRDEAYLGVLV CCCCHHHCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHH DDLITHGTTEPYRMFTSRAEYRLQLREDNADLRLTGVGRAMGLVDDARWARFSSKQEAVQ HHHHHCCCCCHHHHHHCCCEEEEEEECCCCCEEEEECCHHHCCHHHHHHHHHCCHHHHHH RETARLSALWATPGNALGREVVDTLGVPMSRETNVLDLIKRPELSYAALMRVPTLGPGVD HHHHHHEEEECCCCHHHHHHHHHHHCCCCCCCCCHHHHHCCCCCCHHHHHCCCCCCCCCC DAQVAEQVEIGVKYAGYLNRQRDEIARQQRHETTPIPEGFDYAGVRGLSMEVQQKLERVR HHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHCC PQSIGQAQRIPGMTPAAISLLLVHLERARRSQVA CHHCCHHHHCCCCCHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure SDSFYRYDVIVIGGGHAGTEAALAAARAGARTLLLTHNIETVGAMSCNPAIGGIGKGHL CCCEEEEEEEEEECCCCCHHHHHHHHHCCCEEEEEEECCCEECCCCCCCCCCCCCCCHH VKEIDALGGAMAKAADLAGIQWRTLNASKGPAVRATRCQADRNLYRSAIRRIVEAQPNLT HHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCE VFQAAVDDLIIHNGAAEGDSVRGVITQTGLRFEATAVVLTAGTFLAGKIHVGETQYAAGR EHHHHHHHHHEECCCCCCCCCEEEHHHCCCEEEEEEEEEEECCEEEEEEEECCCHHCCCC MGDPPATTLAARLRERPFAIDRLKTGTPPRIDGRTLDYTMMDEQPGDDPLPVMSFMGQVS CCCCHHHHHHHHHHHCCCCHHHCCCCCCCCCCCCEEEEEEECCCCCCCCCHHHHHHHHHC DHPTQVSCWITHTTEQTHDIIRGALHRSPLYSGQIEGIGPRYCPSIEDKVVRFADKTSHQ CCCCEEEEEEEECCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCE IFVEPEGLDVTEIYPNGISTSLPFDVQLALVRSIRGFAQAHITRPGYAIEYDFFDPRGLK EEECCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCC ASLETKAVGGLFFAGQINGTTGYEEAAAQGLLAGLNAARQAQALPAWSPRRDEAYLGVLV CCCCHHHCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHH DDLITHGTTEPYRMFTSRAEYRLQLREDNADLRLTGVGRAMGLVDDARWARFSSKQEAVQ HHHHHCCCCCHHHHHHCCCEEEEEEECCCCCEEEEECCHHHCCHHHHHHHHHCCHHHHHH RETARLSALWATPGNALGREVVDTLGVPMSRETNVLDLIKRPELSYAALMRVPTLGPGVD HHHHHHEEEECCCCHHHHHHHHHHHCCCCCCCCCHHHHHCCCCCCHHHHHCCCCCCCCCC DAQVAEQVEIGVKYAGYLNRQRDEIARQQRHETTPIPEGFDYAGVRGLSMEVQQKLERVR HHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHCC PQSIGQAQRIPGMTPAAISLLLVHLERARRSQVA CHHCCHHHHCCCCCHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 12024217 [H]