Definition | Pseudomonas syringae pv. syringae B728a, complete genome. |
---|---|
Accession | NC_007005 |
Length | 6,093,698 |
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The map label for this gene is bglX [H]
Identifier: 66047220
GI number: 66047220
Start: 4751671
End: 4753932
Strand: Direct
Name: bglX [H]
Synonym: Psyr_3993
Alternate gene names: 66047220
Gene position: 4751671-4753932 (Clockwise)
Preceding gene: 66047217
Following gene: 66047221
Centisome position: 77.98
GC content: 59.28
Gene sequence:
>2262_bases ATGGCCAGTCAGTCGGTGATGGCCCAGACCGCTGCCGCCACGGACAATACAACGCTTCAGGCCAAGAATGCCTTCATCGG CAAACTCATGAAACAAATGACTCTGGACGAAAAGATCGGTCAGTTGCGACTCATCAGTATCAGTTCGGAAATGCCACAGC CGCAAATTCTCAAGGAAATTGCCGCCGGACGAATCGGCGGTACGTTCAACTCCATTACCCGTTCGGAAAATCGTCCGCTG CAGGAAGCCGCAGTCGCCAAAAGCCGTCTGAAAATTCCGATGTTTTTTGCCTACGACGTGATTCACGGTCACCGGACGAT TTTCCCGATCAGCCTGGGCATGGCCGCCAGCTGGGACATGGACGCCATCGCGACGATGGGCCGGGTCTCGGCCAAAGAAG CCAGTGCCGACAGTATCGACATGACCTTCGCGCCCATGGTGGATATTTCCCGCGACCCTCGCTGGGGCCGCAGCTCCGAA GGCTTCGGTGAAGACACCTACCTGGTGTCACGCATTTCCGATGTGATGGTCAGGTCCTTCCAGGGCAAGAACGTCGCAGC CAATGACAGCATCATGGCCGCCGTCAAACACTTCGCCCTGTATGGCGCGGTAGAAGGCGGGCGCGACTACAACACCGTGG ACATGAGCATGACGCGCATGTACCAGGACTACCTGCCGCCGTACAAGGCCGGCATCGATGCCGGCGCCGGCGGCATCATG GTCGCGCTCAACTCGATCAACGGCGTCCCGTCGACCTCCAACAAATGGCTGATGCAGGACCTGTTGCGCAAGGACTGGGG CTTCAAGGGCGTGACCATCAGTGACCACGGCGCGCTCAAGGAGCTGATCGACCACGGCGTGGCCAAGGATTTCCGCGAGG CCGCCAAGCTGGCTATCAAGGCGGGCGTCGACCTGAGCATGAACGACGCGGCCTATGGCGAGCAGTTGCCCGGGCTGGTG AAAGACGGCGAGGTTTCCATGAAGGAAATCGACAGCGCCGTGCGTGAAGTGCTGGGTGCCAAGTACGACATGGGCCTGTT CGCCTCGCCTTACGGTCGCATCGGCGTTGCCGCCGATGACCCTGCCGACACCTATGCGGATGACCGCCTGCACCGTGCCG AAGCTCGCGATGTGGCGCGCAAGACGCTGGTGCTGCTGAAAAACCAGAACGAGACATTGCCACTCAAGAAGCAAGGCACC ATCGCGGTGATCGGCGGACTGGCGCAAAGTCACCTCGACATGCTCGGCAGCTGGTCGGCAGCCGGTCGTCCCAACCAGTC GGTGACAGTGTATGAAGGGCTGGCCAACGCGGTCGGCGACAAGGCCAAGCTGGTTTACGCACGCGGTGCCAACGTCAGTG ACAATGAACACGTCCTCAACTACCTGAACTTCATGGAGAAGGAAGTAGAGATCGACCCGCGTCCGGCGCAGGAAATGATC GACGAAGCGGTCAAGGTCGCCGAGCAGGCCGATGTGATCGTTGCCGTGGTCGGTGAGTCGCGCGGCATGTCCCATGAATC GGCCAGCCGCAGCAGCCTGAACATTCCGGGCAAACAGCGCGACCTGATCAAGGCGCTCAAGGCCACTGGCAAACCACTGG TGCTGGTGCTGATGAATGGCCGTCCGCTGGTTCTGGTCGACGAACAGGAACAGGCCGACGCCATGCTCGAAACCTGGTTC CCGGGCACCGAAGGCGGCAATGCAGTGGCTGACGTACTGTTCGGCGACTACAACCCGTCGGGCAAGCTGGCCATGACATT TCCGCGCTCGATCGGTCAACTGCCGGTCTACTATGCGCACCTGAACACCGGCCGTCCGTATCACGAAGGCAAGCCAGGCA ACTACACCTCGCACTATTTCGAGGAGCCCAATGGCCCGCTGTTCCCGTTCGGTTATGGTCTGAGCTACACCCAGTTCGAC GTCTCGGACATCACGTTGTCGGACGCCAGCATGACGCGCAAAGGCAAGCTCACTGCCAGCGTGACCGTGAAGAATACCGG CAAGGTTGCCGGTGCTACCGTTGTGCAGCTGTATCTGCATGACGTAGCGGCGTCGATCAGCCGTCCGGTAAAGGAACTGA AAAACTTCGAAAAAGTGATGCTTGAGCCCGGAGAAGAAAAAGTCGTGACCTTCACCCTCAGTGAAGACGATCTGAAGTTC TACAACACTCAGCTCAAGCACGTGGCGGAACCTGGCGAATTCAAGGTCATGATCGGCCTGGACTCCGAAGCTGTGAAAGA AGCGACCTTCAATCTGTTGTAA
Upstream 100 bases:
>100_bases AACCCAAAAACTGGCTGTCGGACATTAAACGCGAGTTACTGACAAAAGCCTTGAGAAATCATTCATGAATAAGCTGTGTT TATTAGGTTTGCTGGTCGGT
Downstream 100 bases:
>100_bases CCCCTGCGCATGGCGCGTTCGTGAGCAGTCGCTCGGGAACGCGCCAACAGGGTCCGATCAGGCTGCGACATGACGCTCAA GCATCGCTACTGGCGCATTA
Product: glycoside hydrolase family protein
Products: NA
Alternate protein names: Beta-D-glucoside glucohydrolase; Cellobiase; Gentiobiase [H]
Number of amino acids: Translated: 753; Mature: 752
Protein sequence:
>753_residues MASQSVMAQTAAATDNTTLQAKNAFIGKLMKQMTLDEKIGQLRLISISSEMPQPQILKEIAAGRIGGTFNSITRSENRPL QEAAVAKSRLKIPMFFAYDVIHGHRTIFPISLGMAASWDMDAIATMGRVSAKEASADSIDMTFAPMVDISRDPRWGRSSE GFGEDTYLVSRISDVMVRSFQGKNVAANDSIMAAVKHFALYGAVEGGRDYNTVDMSMTRMYQDYLPPYKAGIDAGAGGIM VALNSINGVPSTSNKWLMQDLLRKDWGFKGVTISDHGALKELIDHGVAKDFREAAKLAIKAGVDLSMNDAAYGEQLPGLV KDGEVSMKEIDSAVREVLGAKYDMGLFASPYGRIGVAADDPADTYADDRLHRAEARDVARKTLVLLKNQNETLPLKKQGT IAVIGGLAQSHLDMLGSWSAAGRPNQSVTVYEGLANAVGDKAKLVYARGANVSDNEHVLNYLNFMEKEVEIDPRPAQEMI DEAVKVAEQADVIVAVVGESRGMSHESASRSSLNIPGKQRDLIKALKATGKPLVLVLMNGRPLVLVDEQEQADAMLETWF PGTEGGNAVADVLFGDYNPSGKLAMTFPRSIGQLPVYYAHLNTGRPYHEGKPGNYTSHYFEEPNGPLFPFGYGLSYTQFD VSDITLSDASMTRKGKLTASVTVKNTGKVAGATVVQLYLHDVAASISRPVKELKNFEKVMLEPGEEKVVTFTLSEDDLKF YNTQLKHVAEPGEFKVMIGLDSEAVKEATFNLL
Sequences:
>Translated_753_residues MASQSVMAQTAAATDNTTLQAKNAFIGKLMKQMTLDEKIGQLRLISISSEMPQPQILKEIAAGRIGGTFNSITRSENRPL QEAAVAKSRLKIPMFFAYDVIHGHRTIFPISLGMAASWDMDAIATMGRVSAKEASADSIDMTFAPMVDISRDPRWGRSSE GFGEDTYLVSRISDVMVRSFQGKNVAANDSIMAAVKHFALYGAVEGGRDYNTVDMSMTRMYQDYLPPYKAGIDAGAGGIM VALNSINGVPSTSNKWLMQDLLRKDWGFKGVTISDHGALKELIDHGVAKDFREAAKLAIKAGVDLSMNDAAYGEQLPGLV KDGEVSMKEIDSAVREVLGAKYDMGLFASPYGRIGVAADDPADTYADDRLHRAEARDVARKTLVLLKNQNETLPLKKQGT IAVIGGLAQSHLDMLGSWSAAGRPNQSVTVYEGLANAVGDKAKLVYARGANVSDNEHVLNYLNFMEKEVEIDPRPAQEMI DEAVKVAEQADVIVAVVGESRGMSHESASRSSLNIPGKQRDLIKALKATGKPLVLVLMNGRPLVLVDEQEQADAMLETWF PGTEGGNAVADVLFGDYNPSGKLAMTFPRSIGQLPVYYAHLNTGRPYHEGKPGNYTSHYFEEPNGPLFPFGYGLSYTQFD VSDITLSDASMTRKGKLTASVTVKNTGKVAGATVVQLYLHDVAASISRPVKELKNFEKVMLEPGEEKVVTFTLSEDDLKF YNTQLKHVAEPGEFKVMIGLDSEAVKEATFNLL >Mature_752_residues ASQSVMAQTAAATDNTTLQAKNAFIGKLMKQMTLDEKIGQLRLISISSEMPQPQILKEIAAGRIGGTFNSITRSENRPLQ EAAVAKSRLKIPMFFAYDVIHGHRTIFPISLGMAASWDMDAIATMGRVSAKEASADSIDMTFAPMVDISRDPRWGRSSEG FGEDTYLVSRISDVMVRSFQGKNVAANDSIMAAVKHFALYGAVEGGRDYNTVDMSMTRMYQDYLPPYKAGIDAGAGGIMV ALNSINGVPSTSNKWLMQDLLRKDWGFKGVTISDHGALKELIDHGVAKDFREAAKLAIKAGVDLSMNDAAYGEQLPGLVK DGEVSMKEIDSAVREVLGAKYDMGLFASPYGRIGVAADDPADTYADDRLHRAEARDVARKTLVLLKNQNETLPLKKQGTI AVIGGLAQSHLDMLGSWSAAGRPNQSVTVYEGLANAVGDKAKLVYARGANVSDNEHVLNYLNFMEKEVEIDPRPAQEMID EAVKVAEQADVIVAVVGESRGMSHESASRSSLNIPGKQRDLIKALKATGKPLVLVLMNGRPLVLVDEQEQADAMLETWFP GTEGGNAVADVLFGDYNPSGKLAMTFPRSIGQLPVYYAHLNTGRPYHEGKPGNYTSHYFEEPNGPLFPFGYGLSYTQFDV SDITLSDASMTRKGKLTASVTVKNTGKVAGATVVQLYLHDVAASISRPVKELKNFEKVMLEPGEEKVVTFTLSEDDLKFY NTQLKHVAEPGEFKVMIGLDSEAVKEATFNLL
Specific function: Unknown
COG id: COG1472
COG function: function code G; Beta-glucosidase-related glycosidases
Gene ontology:
Cell location: Periplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glycosyl hydrolase 3 family [H]
Homologues:
Organism=Escherichia coli, GI1788453, Length=753, Percent_Identity=60.9561752988048, Blast_Score=988, Evalue=0.0,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR019800 - InterPro: IPR002772 - InterPro: IPR001764 - InterPro: IPR017853 [H]
Pfam domain/function: PF00933 Glyco_hydro_3; PF01915 Glyco_hydro_3_C [H]
EC number: =3.2.1.21 [H]
Molecular weight: Translated: 81852; Mature: 81721
Theoretical pI: Translated: 5.69; Mature: 5.69
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.1 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 4.0 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MASQSVMAQTAAATDNTTLQAKNAFIGKLMKQMTLDEKIGQLRLISISSEMPQPQILKEI CCCHHHHHHHHCCCCCCEEEHHHHHHHHHHHHHHHHHHHCCEEEEEECCCCCCHHHHHHH AAGRIGGTFNSITRSENRPLQEAAVAKSRLKIPMFFAYDVIHGHRTIFPISLGMAASWDM HCCCCCCCHHHHHCCCCCCHHHHHHHHHHCCCEEEEEEHHHHCCCEEEEEEECCCCCCCH DAIATMGRVSAKEASADSIDMTFAPMVDISRDPRWGRSSEGFGEDTYLVSRISDVMVRSF HHHHHHHCCHHHHCCCCCCCEEEECCEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHC QGKNVAANDSIMAAVKHFALYGAVEGGRDYNTVDMSMTRMYQDYLPPYKAGIDAGAGGIM CCCCCCCCHHHHHHHHHHHHHEECCCCCCCCCHHHHHHHHHHHHCCHHHCCCCCCCCCEE VALNSINGVPSTSNKWLMQDLLRKDWGFKGVTISDHGALKELIDHGVAKDFREAAKLAIK EEEECCCCCCCCCCHHHHHHHHHHCCCCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHH AGVDLSMNDAAYGEQLPGLVKDGEVSMKEIDSAVREVLGAKYDMGLFASPYGRIGVAADD CCCCCCCCCCHHHHHCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCEECCCCCEEECCCC PADTYADDRLHRAEARDVARKTLVLLKNQNETLPLKKQGTIAVIGGLAQSHLDMLGSWSA CCCHHHHHHHHHHHHHHHHHHHEEEEECCCCCCCCCCCCCEEEECCHHHHHHHHHHCCCC AGRPNQSVTVYEGLANAVGDKAKLVYARGANVSDNEHVLNYLNFMEKEVEIDPRPAQEMI CCCCCCCEEHHHHHHHHCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHCCCCCCCHHHHH DEAVKVAEQADVIVAVVGESRGMSHESASRSSLNIPGKQRDLIKALKATGKPLVLVLMNG HHHHHHHHHCCEEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCEEEEEECC RPLVLVDEQEQADAMLETWFPGTEGGNAVADVLFGDYNPSGKLAMTFPRSIGQLPVYYAH CEEEEECCCHHHHHHHHHCCCCCCCCCCEEEEEECCCCCCCCEEEECCCCCCCCCEEEEE LNTGRPYHEGKPGNYTSHYFEEPNGPLFPFGYGLSYTQFDVSDITLSDASMTRKGKLTAS ECCCCCCCCCCCCCCCHHHCCCCCCCCCEECCCCCEEEEECCEEEECCCCCCCCCCEEEE VTVKNTGKVAGATVVQLYLHDVAASISRPVKELKNFEKVMLEPGEEKVVTFTLSEDDLKF EEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCHHH YNTQLKHVAEPGEFKVMIGLDSEAVKEATFNLL HHHHHHHCCCCCCEEEEEECCHHHHHHHHHCCC >Mature Secondary Structure ASQSVMAQTAAATDNTTLQAKNAFIGKLMKQMTLDEKIGQLRLISISSEMPQPQILKEI CCHHHHHHHHCCCCCCEEEHHHHHHHHHHHHHHHHHHHCCEEEEEECCCCCCHHHHHHH AAGRIGGTFNSITRSENRPLQEAAVAKSRLKIPMFFAYDVIHGHRTIFPISLGMAASWDM HCCCCCCCHHHHHCCCCCCHHHHHHHHHHCCCEEEEEEHHHHCCCEEEEEEECCCCCCCH DAIATMGRVSAKEASADSIDMTFAPMVDISRDPRWGRSSEGFGEDTYLVSRISDVMVRSF HHHHHHHCCHHHHCCCCCCCEEEECCEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHC QGKNVAANDSIMAAVKHFALYGAVEGGRDYNTVDMSMTRMYQDYLPPYKAGIDAGAGGIM CCCCCCCCHHHHHHHHHHHHHEECCCCCCCCCHHHHHHHHHHHHCCHHHCCCCCCCCCEE VALNSINGVPSTSNKWLMQDLLRKDWGFKGVTISDHGALKELIDHGVAKDFREAAKLAIK EEEECCCCCCCCCCHHHHHHHHHHCCCCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHH AGVDLSMNDAAYGEQLPGLVKDGEVSMKEIDSAVREVLGAKYDMGLFASPYGRIGVAADD CCCCCCCCCCHHHHHCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCEECCCCCEEECCCC PADTYADDRLHRAEARDVARKTLVLLKNQNETLPLKKQGTIAVIGGLAQSHLDMLGSWSA CCCHHHHHHHHHHHHHHHHHHHEEEEECCCCCCCCCCCCCEEEECCHHHHHHHHHHCCCC AGRPNQSVTVYEGLANAVGDKAKLVYARGANVSDNEHVLNYLNFMEKEVEIDPRPAQEMI CCCCCCCEEHHHHHHHHCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHCCCCCCCHHHHH DEAVKVAEQADVIVAVVGESRGMSHESASRSSLNIPGKQRDLIKALKATGKPLVLVLMNG HHHHHHHHHCCEEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCEEEEEECC RPLVLVDEQEQADAMLETWFPGTEGGNAVADVLFGDYNPSGKLAMTFPRSIGQLPVYYAH CEEEEECCCHHHHHHHHHCCCCCCCCCCEEEEEECCCCCCCCEEEECCCCCCCCCEEEEE LNTGRPYHEGKPGNYTSHYFEEPNGPLFPFGYGLSYTQFDVSDITLSDASMTRKGKLTAS ECCCCCCCCCCCCCCCHHHCCCCCCCCCEECCCCCEEEEECCEEEECCCCCCCCCCEEEE VTVKNTGKVAGATVVQLYLHDVAASISRPVKELKNFEKVMLEPGEEKVVTFTLSEDDLKF EEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCHHH YNTQLKHVAEPGEFKVMIGLDSEAVKEATFNLL HHHHHHHCCCCCCEEEEEECCHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9278503 [H]