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The map label for this gene is ybgL [C]

Identifier: 66045958

GI number: 66045958

Start: 3304274

End: 3305029

Strand: Reverse

Name: ybgL [C]

Synonym: Psyr_2722

Alternate gene names: 66045958

Gene position: 3305029-3304274 (Counterclockwise)

Preceding gene: 66045960

Following gene: 66045957

Centisome position: 54.24

GC content: 62.7

Gene sequence:

>756_bases
ATGCAGGTGGATTTCAACTCGGACATGGGTGAAAGCTTTGGCGCGTGGACCATTGGTGACGGCGTCGATACTGAATTGAT
GACCTATATCAGCTCCGCCAATGTTGCGACCGGTTTTCACGCCGGTGACCCTGGCACCATGCGCCGCACGATCGAGCAGG
CGAAACGCCTGGGCGTTGCGATCGGCGCACACCCAGGGTTCCGCGATCTGGTCGGCTTTGGCCGCCGACATATCAACTCG
ACGCCCCAGGAACTGGTCGACGACATGCTCTACCAACTGGGTGCCCTGCGCGAGCTTGCGCGGGTGCAAGGCGTGGCCTT
ACAGCATTTCAAACCCCATGGCGCCTTGTACATGCACCTGGCCAGGGATGAAGCCGCAGCCCGACTGCTGGTGGAGAACC
TGCAGCGCCTGGAGCCTGATTTGCTGCTCTACTGCATGCCCGGTTCGGTTATCTGCAAGATCGCCGAAGAGCTGGGCCAG
CCGGTGATCCGCGAGTTCTACGCTGATCGCGCTTACGACCTCAGCGGCTCCATCGTCTTCACTCGTCACGTACGCGCCCT
GGACCCGACCGAAGTCGCAGCCCGCGTGGTGCGCGCGTGCCTGCAAGGTCTGGTGCGTACTGTCGAGGGTGAGGACCTGA
GCATCGAATTCGATTCGATCTGCCTGCACAGCGACACGCCGGGCGCGCTGGACCTTGCAGAAGCGACACGCCTGGCGCTC
GACGCTGCGGGCATCAAGGTGCGTGCGCCGCGTTGA

Upstream 100 bases:

>100_bases
GTATCTGTTAATAGATCTACCCAAGGGGTGCGACTGAATTTAACGTGGTTTGCATGAAGCCGGATAGCCCCTTGTCCGGC
CAGCCACAGGAGCAACAGCC

Downstream 100 bases:

>100_bases
ATAAAAGGCATCATGCGCACAGACGCACGAGCCGTGTTACTGATTTTTGCCTGCCGTTCTACAACGATTTCAAGAAAGGA
ACAGACATGGCTGATCCGAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 251; Mature: 251

Protein sequence:

>251_residues
MQVDFNSDMGESFGAWTIGDGVDTELMTYISSANVATGFHAGDPGTMRRTIEQAKRLGVAIGAHPGFRDLVGFGRRHINS
TPQELVDDMLYQLGALRELARVQGVALQHFKPHGALYMHLARDEAAARLLVENLQRLEPDLLLYCMPGSVICKIAEELGQ
PVIREFYADRAYDLSGSIVFTRHVRALDPTEVAARVVRACLQGLVRTVEGEDLSIEFDSICLHSDTPGALDLAEATRLAL
DAAGIKVRAPR

Sequences:

>Translated_251_residues
MQVDFNSDMGESFGAWTIGDGVDTELMTYISSANVATGFHAGDPGTMRRTIEQAKRLGVAIGAHPGFRDLVGFGRRHINS
TPQELVDDMLYQLGALRELARVQGVALQHFKPHGALYMHLARDEAAARLLVENLQRLEPDLLLYCMPGSVICKIAEELGQ
PVIREFYADRAYDLSGSIVFTRHVRALDPTEVAARVVRACLQGLVRTVEGEDLSIEFDSICLHSDTPGALDLAEATRLAL
DAAGIKVRAPR
>Mature_251_residues
MQVDFNSDMGESFGAWTIGDGVDTELMTYISSANVATGFHAGDPGTMRRTIEQAKRLGVAIGAHPGFRDLVGFGRRHINS
TPQELVDDMLYQLGALRELARVQGVALQHFKPHGALYMHLARDEAAARLLVENLQRLEPDLLLYCMPGSVICKIAEELGQ
PVIREFYADRAYDLSGSIVFTRHVRALDPTEVAARVVRACLQGLVRTVEGEDLSIEFDSICLHSDTPGALDLAEATRLAL
DAAGIKVRAPR

Specific function: Unknown

COG id: COG1540

COG function: function code R; Uncharacterized proteins, homologs of lactam utilization protein B

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0271 (lamB) family [H]

Homologues:

Organism=Escherichia coli, GI1786931, Length=251, Percent_Identity=36.2549800796813, Blast_Score=159, Evalue=1e-40,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011330
- InterPro:   IPR005501 [H]

Pfam domain/function: PF03746 LamB_YcsF [H]

EC number: NA

Molecular weight: Translated: 27458; Mature: 27458

Theoretical pI: Translated: 5.34; Mature: 5.34

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQVDFNSDMGESFGAWTIGDGVDTELMTYISSANVATGFHAGDPGTMRRTIEQAKRLGVA
CCCCCCCCCCCCCCCEECCCCCCHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHCEE
IGAHPGFRDLVGFGRRHINSTPQELVDDMLYQLGALRELARVQGVALQHFKPHGALYMHL
ECCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEE
ARDEAAARLLVENLQRLEPDLLLYCMPGSVICKIAEELGQPVIREFYADRAYDLSGSIVF
HHHHHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHCHHHHHHHHHCCCCCCCCCEEE
TRHVRALDPTEVAARVVRACLQGLVRTVEGEDLSIEFDSICLHSDTPGALDLAEATRLAL
EECCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCEEEECCCCCCHHHHHHHHHHH
DAAGIKVRAPR
HHCCEEEECCC
>Mature Secondary Structure
MQVDFNSDMGESFGAWTIGDGVDTELMTYISSANVATGFHAGDPGTMRRTIEQAKRLGVA
CCCCCCCCCCCCCCCEECCCCCCHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHCEE
IGAHPGFRDLVGFGRRHINSTPQELVDDMLYQLGALRELARVQGVALQHFKPHGALYMHL
ECCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEE
ARDEAAARLLVENLQRLEPDLLLYCMPGSVICKIAEELGQPVIREFYADRAYDLSGSIVF
HHHHHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHCHHHHHHHHHCCCCCCCCCEEE
TRHVRALDPTEVAARVVRACLQGLVRTVEGEDLSIEFDSICLHSDTPGALDLAEATRLAL
EECCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCEEEECCCCCCHHHHHHHHHHH
DAAGIKVRAPR
HHCCEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12928499 [H]