Definition | Pseudomonas syringae pv. syringae B728a, complete genome. |
---|---|
Accession | NC_007005 |
Length | 6,093,698 |
Click here to switch to the map view.
The map label for this gene is 66045871
Identifier: 66045871
GI number: 66045871
Start: 3201692
End: 3202870
Strand: Direct
Name: 66045871
Synonym: Psyr_2635
Alternate gene names: NA
Gene position: 3201692-3202870 (Clockwise)
Preceding gene: 66045870
Following gene: 66045873
Centisome position: 52.54
GC content: 59.97
Gene sequence:
>1179_bases ATGAAAACGCCTCGCCCCGACACCCGTCTCAAATCCCTCATCAACTTGCGCAATTTAAAGATGGCGCGGTCTGCGCACGC GTTCGTGCGAGGCAATACCGCCCAGTTCTATGAGTGGCTTCACAGTCAGTCAGGCAGACGTCTGCCCAGCGGTCCGCCGG TCTGGATCTGCGGAGACTGTCATGCCGGCAATCTGGGGCCCACGGGGGACTCGAGAGGGCGCATCGACATGCATATCCGC GACCTCGATCAAGCCGTCATCGGCAATCCTGCCCATGATCTGGTGAGGCTGGGATTGTCGTTAGCGACGGCTGCTCGTGG CTCGGATCTACCCGGTGTCACCACTGCAAGAATGCTGGAAGAGATGATGCAGGGCTACGAAGAAGCGTTTATGGGCGACG ACGATGAAGAGCCCGATCGTCCTGCGCAAGTGAAAGCAGGAATGCGTAGCGCGGTGCAACGCACGTGGAAGCATCTGGCC AAGGAACGCTTCGAAGGTACGCAACCGACCATTCCGCTGGGCAAGCATTTCTGGCAACTGTCGCGTGCGGAACGCGATGC GATCAAGGCGCTTTGTGAGACGCCGGAGATTCATGCGCTGGTGACCTCGCTCAAAGGCAGGTCCCAGGATGACCGTGTGC GCTTGCTTGACTCCGCCTATTGGGTAAAAGGATGCAGCTCTCTGGGGCTGCTTCGCTACGCAGTGCTGATGGGGGTTGGC GATGAAGAGGATGAAGAGTTCTGCCTGCTCGACGTCAAGGAAGCCGTCGCAGCAGCGGCCCCACGTACGGCGAGGGCTCG CATGCCCAGAGACAATGGCAAACGGGTTGTGGAAGGCGCCCGCAACCTGTCGCCCGGCCTGGGTAGCCGAATGGTTGCCG TGCGCATGCTGGATCACTCGTTCTTCATACGTGAGCTGCTTCCCCAGGACATGAAGCTGGAACTGGATGAGCTCACTGAG CAAGAGGCCATGCAGGCCGCAGCATATCTCGCAAAAGTGGTTGGTAACGCCCATGCCAGACAGATGGACCTGGCCACACG TGCGGCGTGGATCAGGGATCTGCAAAGCAATCGGTCCGAGACCCTGGACGCTCCCTCCTGGCTATGGTCGAGTGTCGTCC AGCTGGTCGGCAGTCACGAGCAAGGCTACCTTGAGCATTGTCGGCGCTACGCGCTGTAG
Upstream 100 bases:
>100_bases GGTCTCGACGCTGAAGACGAATAGCGACCAGATGCGAAATATCTTGAAACATTCGTGTCACATACCGAGTCAATGGAATA ACCCTCTTCAAGGTTTTCCA
Downstream 100 bases:
>100_bases CGCCTTATGAATGCCGAGATGAGCGGAACAGAATTCAGTTAATCGATATTCCGCACATATTCTTCGGGAACGCATAAGGC AGTCAGCGCCAGGTACTTAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 392; Mature: 392
Protein sequence:
>392_residues MKTPRPDTRLKSLINLRNLKMARSAHAFVRGNTAQFYEWLHSQSGRRLPSGPPVWICGDCHAGNLGPTGDSRGRIDMHIR DLDQAVIGNPAHDLVRLGLSLATAARGSDLPGVTTARMLEEMMQGYEEAFMGDDDEEPDRPAQVKAGMRSAVQRTWKHLA KERFEGTQPTIPLGKHFWQLSRAERDAIKALCETPEIHALVTSLKGRSQDDRVRLLDSAYWVKGCSSLGLLRYAVLMGVG DEEDEEFCLLDVKEAVAAAAPRTARARMPRDNGKRVVEGARNLSPGLGSRMVAVRMLDHSFFIRELLPQDMKLELDELTE QEAMQAAAYLAKVVGNAHARQMDLATRAAWIRDLQSNRSETLDAPSWLWSSVVQLVGSHEQGYLEHCRRYAL
Sequences:
>Translated_392_residues MKTPRPDTRLKSLINLRNLKMARSAHAFVRGNTAQFYEWLHSQSGRRLPSGPPVWICGDCHAGNLGPTGDSRGRIDMHIR DLDQAVIGNPAHDLVRLGLSLATAARGSDLPGVTTARMLEEMMQGYEEAFMGDDDEEPDRPAQVKAGMRSAVQRTWKHLA KERFEGTQPTIPLGKHFWQLSRAERDAIKALCETPEIHALVTSLKGRSQDDRVRLLDSAYWVKGCSSLGLLRYAVLMGVG DEEDEEFCLLDVKEAVAAAAPRTARARMPRDNGKRVVEGARNLSPGLGSRMVAVRMLDHSFFIRELLPQDMKLELDELTE QEAMQAAAYLAKVVGNAHARQMDLATRAAWIRDLQSNRSETLDAPSWLWSSVVQLVGSHEQGYLEHCRRYAL >Mature_392_residues MKTPRPDTRLKSLINLRNLKMARSAHAFVRGNTAQFYEWLHSQSGRRLPSGPPVWICGDCHAGNLGPTGDSRGRIDMHIR DLDQAVIGNPAHDLVRLGLSLATAARGSDLPGVTTARMLEEMMQGYEEAFMGDDDEEPDRPAQVKAGMRSAVQRTWKHLA KERFEGTQPTIPLGKHFWQLSRAERDAIKALCETPEIHALVTSLKGRSQDDRVRLLDSAYWVKGCSSLGLLRYAVLMGVG DEEDEEFCLLDVKEAVAAAAPRTARARMPRDNGKRVVEGARNLSPGLGSRMVAVRMLDHSFFIRELLPQDMKLELDELTE QEAMQAAAYLAKVVGNAHARQMDLATRAAWIRDLQSNRSETLDAPSWLWSSVVQLVGSHEQGYLEHCRRYAL
Specific function: Unknown
COG id: COG4320
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 43773; Mature: 43773
Theoretical pI: Translated: 7.63; Mature: 7.63
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 5.4 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 5.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKTPRPDTRLKSLINLRNLKMARSAHAFVRGNTAQFYEWLHSQSGRRLPSGPPVWICGDC CCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCEEEECCC HAGNLGPTGDSRGRIDMHIRDLDQAVIGNPAHDLVRLGLSLATAARGSDLPGVTTARMLE CCCCCCCCCCCCCEEEEHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHH EMMQGYEEAFMGDDDEEPDRPAQVKAGMRSAVQRTWKHLAKERFEGTQPTIPLGKHFWQL HHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHH SRAERDAIKALCETPEIHALVTSLKGRSQDDRVRLLDSAYWVKGCSSLGLLRYAVLMGVG HHHHHHHHHHHHCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC DEEDEEFCLLDVKEAVAAAAPRTARARMPRDNGKRVVEGARNLSPGLGSRMVAVRMLDHS CCCCCCEEHEEHHHHHHHHCCCHHHHCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHH FFIRELLPQDMKLELDELTEQEAMQAAAYLAKVVGNAHARQMDLATRAAWIRDLQSNRSE HHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCHHH TLDAPSWLWSSVVQLVGSHEQGYLEHCRRYAL CCCCHHHHHHHHHHHHCCCCHHHHHHHHHHCC >Mature Secondary Structure MKTPRPDTRLKSLINLRNLKMARSAHAFVRGNTAQFYEWLHSQSGRRLPSGPPVWICGDC CCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCEEEECCC HAGNLGPTGDSRGRIDMHIRDLDQAVIGNPAHDLVRLGLSLATAARGSDLPGVTTARMLE CCCCCCCCCCCCCEEEEHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHH EMMQGYEEAFMGDDDEEPDRPAQVKAGMRSAVQRTWKHLAKERFEGTQPTIPLGKHFWQL HHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHH SRAERDAIKALCETPEIHALVTSLKGRSQDDRVRLLDSAYWVKGCSSLGLLRYAVLMGVG HHHHHHHHHHHHCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC DEEDEEFCLLDVKEAVAAAAPRTARARMPRDNGKRVVEGARNLSPGLGSRMVAVRMLDHS CCCCCCEEHEEHHHHHHHHCCCHHHHCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHH FFIRELLPQDMKLELDELTEQEAMQAAAYLAKVVGNAHARQMDLATRAAWIRDLQSNRSE HHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCHHH TLDAPSWLWSSVVQLVGSHEQGYLEHCRRYAL CCCCHHHHHHHHHHHHCCCCHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA