| Definition | Pseudomonas syringae pv. syringae B728a, complete genome. |
|---|---|
| Accession | NC_007005 |
| Length | 6,093,698 |
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The map label for this gene is phnK [H]
Identifier: 66045495
GI number: 66045495
Start: 2620055
End: 2620876
Strand: Direct
Name: phnK [H]
Synonym: Psyr_2255
Alternate gene names: 66045495
Gene position: 2620055-2620876 (Clockwise)
Preceding gene: 66045494
Following gene: 66045496
Centisome position: 43.0
GC content: 64.48
Gene sequence:
>822_bases ATGATCAGTGCACGTTCACTGGACCCGGCGGGCGAGCGCCTTCCCGAGGCTGTGCAGCCGCTGCTCAAGGTACGCGGCCT GACCCGTCTGTACGGTGTGCAGAAGGGCTGTCAGGACGTCAGTTTCGATCTGTATCCCGGTGAAGTGCTGGGCATCGTTG GCGAGTCCGGTTCGGGGAAATCCACGCTGCTCTCGCTGTTGAGCGGACGTTGCCCGCCGGATCGCGGCAGCATCGACTAT CGCGGCAAGGAGGGCGACTGGTTCGACCTGTACAGCGCCAGTGAGGCGCAGCGGCGCACCTTGTTGCGCACCGAGTGGGG CTTTGTCGAACAGAATCCGCGCGATGGCCTGCGCATGGGCGTGTCGGCCGGCGCCAATATCGGCGAGCGTCTGATGGCGC AGGGGGTGCGCAATTATCAGCAGTTGCGCGGTGCCGCGCTGGACTGGTTGACCCAGGTGGAGATCGATCCGCAGCGCATC GACGACTTGCCGCGGACTTTTTCCGGCGGCATGCAGCAGCGCCTGCAAATCGCCCGCAATCTGGTCTCCAGCCCCAGGCT GGTGTTCATGGACGAACCCACCGGCGGGCTCGACGTGTCGGTGCAGGCCCGCTTGCTCGATCTGTTGCGCGGGCTGGTGC GCGAACTGGATCTGGCTGTAGTCATCGTCACCCATGATCTGGCGGTCGCGCGGCTGCTGGCTGACCGGCTGATGGTCATG CGTCGCTCGGAAGTGGTCGAAAGCGGCCTGACCGACCAGATTCTCGATGACCCGCAGCACCCGTATTCGCAACTGCTGGT GTCCTCGGTATTGCAGCCATGA
Upstream 100 bases:
>100_bases TTCTCGACGAGCTGATTCTCGACGATGCCGGGACGCAGAGCTTTGTCTGTTCCGACACCGATTACTGCGCCCAGCGCGTC AAACAGCAGGAGAACGACCG
Downstream 100 bases:
>100_bases GCCGCACTGTCCGAACAGCCTGTACAGAAGAGGTGAGCCCGATGACAACGTTGATCGAGGTCCGTGACCTGTCGAAAACC TTCACCCTGCATCAGCACAA
Product: phosphonate C-P lyase system protein PhnK
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 273; Mature: 273
Protein sequence:
>273_residues MISARSLDPAGERLPEAVQPLLKVRGLTRLYGVQKGCQDVSFDLYPGEVLGIVGESGSGKSTLLSLLSGRCPPDRGSIDY RGKEGDWFDLYSASEAQRRTLLRTEWGFVEQNPRDGLRMGVSAGANIGERLMAQGVRNYQQLRGAALDWLTQVEIDPQRI DDLPRTFSGGMQQRLQIARNLVSSPRLVFMDEPTGGLDVSVQARLLDLLRGLVRELDLAVVIVTHDLAVARLLADRLMVM RRSEVVESGLTDQILDDPQHPYSQLLVSSVLQP
Sequences:
>Translated_273_residues MISARSLDPAGERLPEAVQPLLKVRGLTRLYGVQKGCQDVSFDLYPGEVLGIVGESGSGKSTLLSLLSGRCPPDRGSIDY RGKEGDWFDLYSASEAQRRTLLRTEWGFVEQNPRDGLRMGVSAGANIGERLMAQGVRNYQQLRGAALDWLTQVEIDPQRI DDLPRTFSGGMQQRLQIARNLVSSPRLVFMDEPTGGLDVSVQARLLDLLRGLVRELDLAVVIVTHDLAVARLLADRLMVM RRSEVVESGLTDQILDDPQHPYSQLLVSSVLQP >Mature_273_residues MISARSLDPAGERLPEAVQPLLKVRGLTRLYGVQKGCQDVSFDLYPGEVLGIVGESGSGKSTLLSLLSGRCPPDRGSIDY RGKEGDWFDLYSASEAQRRTLLRTEWGFVEQNPRDGLRMGVSAGANIGERLMAQGVRNYQQLRGAALDWLTQVEIDPQRI DDLPRTFSGGMQQRLQIARNLVSSPRLVFMDEPTGGLDVSVQARLLDLLRGLVRELDLAVVIVTHDLAVARLLADRLMVM RRSEVVESGLTDQILDDPQHPYSQLLVSSVLQP
Specific function: Part of the binding-protein-dependent transport system for alkylphosphonates. Probably responsible for energy coupling to the transport system [H]
COG id: COG4107
COG function: function code P; ABC-type phosphonate transport system, ATPase component
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ABC transporter domain [H]
Homologues:
Organism=Homo sapiens, GI27262624, Length=226, Percent_Identity=27.4336283185841, Blast_Score=81, Evalue=1e-15, Organism=Homo sapiens, GI27262626, Length=226, Percent_Identity=27.4336283185841, Blast_Score=81, Evalue=1e-15, Organism=Homo sapiens, GI27436953, Length=230, Percent_Identity=26.0869565217391, Blast_Score=79, Evalue=4e-15, Organism=Homo sapiens, GI45446740, Length=242, Percent_Identity=27.2727272727273, Blast_Score=78, Evalue=9e-15, Organism=Homo sapiens, GI47078218, Length=242, Percent_Identity=27.2727272727273, Blast_Score=78, Evalue=1e-14, Organism=Homo sapiens, GI27477115, Length=208, Percent_Identity=24.5192307692308, Blast_Score=74, Evalue=1e-13, Organism=Homo sapiens, GI171184400, Length=244, Percent_Identity=27.8688524590164, Blast_Score=74, Evalue=2e-13, Organism=Homo sapiens, GI105990541, Length=220, Percent_Identity=25.4545454545455, Blast_Score=72, Evalue=5e-13, Organism=Homo sapiens, GI9955963, Length=230, Percent_Identity=28.695652173913, Blast_Score=71, Evalue=8e-13, Organism=Escherichia coli, GI48994997, Length=254, Percent_Identity=71.6535433070866, Blast_Score=354, Evalue=4e-99, Organism=Escherichia coli, GI1789962, Length=262, Percent_Identity=38.5496183206107, Blast_Score=159, Evalue=2e-40, Organism=Escherichia coli, GI1789963, Length=263, Percent_Identity=36.8821292775665, Blast_Score=149, Evalue=3e-37, Organism=Escherichia coli, GI1787500, Length=240, Percent_Identity=35.8333333333333, Blast_Score=145, Evalue=3e-36, Organism=Escherichia coli, GI1787758, Length=224, Percent_Identity=39.7321428571429, Blast_Score=139, Evalue=3e-34, Organism=Escherichia coli, GI145693107, Length=246, Percent_Identity=35.7723577235772, Blast_Score=137, Evalue=7e-34, Organism=Escherichia coli, GI1788506, Length=285, Percent_Identity=34.7368421052632, Blast_Score=135, Evalue=3e-33, Organism=Escherichia coli, GI48994883, Length=262, Percent_Identity=33.969465648855, Blast_Score=129, Evalue=2e-31, Organism=Escherichia coli, GI1787759, Length=262, Percent_Identity=33.206106870229, Blast_Score=121, Evalue=6e-29, Organism=Escherichia coli, GI87081791, Length=261, Percent_Identity=31.0344827586207, Blast_Score=111, Evalue=4e-26, Organism=Escherichia coli, GI1788225, Length=255, Percent_Identity=32.5490196078431, Blast_Score=110, Evalue=9e-26, Organism=Escherichia coli, GI1789032, Length=239, Percent_Identity=32.6359832635983, Blast_Score=108, Evalue=3e-25, Organism=Escherichia coli, GI87081834, Length=200, Percent_Identity=38, Blast_Score=106, Evalue=1e-24, Organism=Escherichia coli, GI1787370, Length=254, Percent_Identity=29.9212598425197, Blast_Score=102, Evalue=2e-23, Organism=Escherichia coli, GI1787548, Length=262, Percent_Identity=28.2442748091603, Blast_Score=102, Evalue=3e-23, Organism=Escherichia coli, GI1787547, Length=265, Percent_Identity=27.9245283018868, Blast_Score=101, Evalue=5e-23, Organism=Escherichia coli, GI1787089, Length=231, Percent_Identity=32.034632034632, Blast_Score=100, Evalue=1e-22, Organism=Escherichia coli, GI1789891, Length=248, Percent_Identity=30.6451612903226, Blast_Score=100, Evalue=2e-22, Organism=Escherichia coli, GI1788761, Length=238, Percent_Identity=29.4117647058824, Blast_Score=100, Evalue=2e-22, Organism=Escherichia coli, GI1786398, Length=256, Percent_Identity=26.171875, Blast_Score=98, Evalue=6e-22, Organism=Escherichia coli, GI1789672, Length=255, Percent_Identity=27.4509803921569, Blast_Score=96, Evalue=2e-21, Organism=Escherichia coli, GI1788472, Length=278, Percent_Identity=28.7769784172662, Blast_Score=93, Evalue=1e-20, Organism=Escherichia coli, GI1789890, Length=243, Percent_Identity=30.8641975308642, Blast_Score=92, Evalue=4e-20, Organism=Escherichia coli, GI1786563, Length=225, Percent_Identity=31.1111111111111, Blast_Score=92, Evalue=5e-20, Organism=Escherichia coli, GI1787792, Length=238, Percent_Identity=31.0924369747899, Blast_Score=91, Evalue=6e-20, Organism=Escherichia coli, GI1787105, Length=236, Percent_Identity=34.7457627118644, Blast_Score=91, Evalue=6e-20, Organism=Escherichia coli, GI1788450, Length=256, Percent_Identity=28.515625, Blast_Score=91, Evalue=1e-19, Organism=Escherichia coli, GI1786703, Length=184, Percent_Identity=36.4130434782609, Blast_Score=90, Evalue=1e-19, Organism=Escherichia coli, GI1790534, Length=203, Percent_Identity=37.4384236453202, Blast_Score=90, Evalue=2e-19, Organism=Escherichia coli, GI1786872, Length=252, Percent_Identity=27.3809523809524, Blast_Score=89, Evalue=3e-19, Organism=Escherichia coli, GI1788644, Length=260, Percent_Identity=30, Blast_Score=89, Evalue=4e-19, Organism=Escherichia coli, GI1787029, Length=238, Percent_Identity=28.1512605042017, Blast_Score=89, Evalue=4e-19, Organism=Escherichia coli, GI1790162, Length=247, Percent_Identity=30.7692307692308, Blast_Score=88, Evalue=5e-19, Organism=Escherichia coli, GI1790525, Length=240, Percent_Identity=26.25, Blast_Score=88, Evalue=5e-19, Organism=Escherichia coli, GI87081709, Length=229, Percent_Identity=26.2008733624454, Blast_Score=88, Evalue=6e-19, Organism=Escherichia coli, GI1789864, Length=247, Percent_Identity=25.1012145748988, Blast_Score=88, Evalue=7e-19, Organism=Escherichia coli, GI1788210, Length=239, Percent_Identity=30.5439330543933, Blast_Score=87, Evalue=1e-18, Organism=Escherichia coli, GI1787712, Length=238, Percent_Identity=29.4117647058824, Blast_Score=87, Evalue=2e-18, Organism=Escherichia coli, GI48995001, Length=228, Percent_Identity=29.8245614035088, Blast_Score=85, Evalue=4e-18, Organism=Escherichia coli, GI1789873, Length=225, Percent_Identity=28.8888888888889, Blast_Score=84, Evalue=1e-17, Organism=Escherichia coli, GI1789991, Length=246, Percent_Identity=29.2682926829268, Blast_Score=84, Evalue=1e-17, Organism=Escherichia coli, GI1788165, Length=229, Percent_Identity=28.82096069869, Blast_Score=83, Evalue=2e-17, Organism=Escherichia coli, GI1790190, Length=215, Percent_Identity=26.5116279069767, Blast_Score=82, Evalue=3e-17, Organism=Escherichia coli, GI1786698, Length=207, Percent_Identity=28.0193236714976, Blast_Score=82, Evalue=4e-17, Organism=Escherichia coli, GI1786803, Length=244, Percent_Identity=29.0983606557377, Blast_Score=81, Evalue=9e-17, Organism=Escherichia coli, GI87082268, Length=240, Percent_Identity=29.1666666666667, Blast_Score=77, Evalue=2e-15, Organism=Escherichia coli, GI1789593, Length=241, Percent_Identity=24.896265560166, Blast_Score=76, Evalue=2e-15, Organism=Escherichia coli, GI1790467, Length=228, Percent_Identity=26.3157894736842, Blast_Score=76, Evalue=2e-15, Organism=Escherichia coli, GI1786253, Length=238, Percent_Identity=28.5714285714286, Blast_Score=72, Evalue=3e-14, Organism=Escherichia coli, GI87082267, Length=254, Percent_Identity=29.1338582677165, Blast_Score=72, Evalue=5e-14, Organism=Escherichia coli, GI1788897, Length=235, Percent_Identity=31.063829787234, Blast_Score=72, Evalue=5e-14, Organism=Escherichia coli, GI48994943, Length=240, Percent_Identity=27.5, Blast_Score=70, Evalue=1e-13, Organism=Escherichia coli, GI1786319, Length=233, Percent_Identity=27.0386266094421, Blast_Score=70, Evalue=1e-13, Organism=Escherichia coli, GI1787182, Length=232, Percent_Identity=25.4310344827586, Blast_Score=70, Evalue=2e-13, Organism=Escherichia coli, GI87081782, Length=248, Percent_Identity=26.6129032258064, Blast_Score=69, Evalue=4e-13, Organism=Escherichia coli, GI1789586, Length=256, Percent_Identity=25, Blast_Score=66, Evalue=3e-12, Organism=Escherichia coli, GI1786654, Length=223, Percent_Identity=29.1479820627803, Blast_Score=65, Evalue=5e-12, Organism=Escherichia coli, GI1787164, Length=88, Percent_Identity=35.2272727272727, Blast_Score=64, Evalue=9e-12, Organism=Escherichia coli, GI1786981, Length=243, Percent_Identity=27.9835390946502, Blast_Score=62, Evalue=4e-11, Organism=Caenorhabditis elegans, GI115533608, Length=242, Percent_Identity=26.4462809917355, Blast_Score=81, Evalue=5e-16, Organism=Caenorhabditis elegans, GI71992290, Length=260, Percent_Identity=25.3846153846154, Blast_Score=80, Evalue=1e-15, Organism=Caenorhabditis elegans, GI25146777, Length=227, Percent_Identity=29.5154185022026, Blast_Score=79, Evalue=3e-15, Organism=Caenorhabditis elegans, GI17558664, Length=241, Percent_Identity=29.8755186721992, Blast_Score=79, Evalue=3e-15, Organism=Caenorhabditis elegans, GI115534520, Length=228, Percent_Identity=27.6315789473684, Blast_Score=76, Evalue=2e-14, Organism=Caenorhabditis elegans, GI71984940, Length=223, Percent_Identity=28.6995515695067, Blast_Score=74, Evalue=5e-14, Organism=Caenorhabditis elegans, GI17510237, Length=257, Percent_Identity=21.011673151751, Blast_Score=70, Evalue=1e-12, Organism=Saccharomyces cerevisiae, GI6322640, Length=255, Percent_Identity=28.6274509803922, Blast_Score=76, Evalue=7e-15, Organism=Saccharomyces cerevisiae, GI6324985, Length=240, Percent_Identity=26.25, Blast_Score=71, Evalue=2e-13, Organism=Drosophila melanogaster, GI24666092, Length=229, Percent_Identity=26.2008733624454, Blast_Score=84, Evalue=1e-16, Organism=Drosophila melanogaster, GI24641565, Length=267, Percent_Identity=28.8389513108614, Blast_Score=82, Evalue=3e-16, Organism=Drosophila melanogaster, GI24643674, Length=244, Percent_Identity=26.6393442622951, Blast_Score=81, Evalue=6e-16, Organism=Drosophila melanogaster, GI24648314, Length=252, Percent_Identity=23.4126984126984, Blast_Score=76, Evalue=3e-14, Organism=Drosophila melanogaster, GI85726357, Length=260, Percent_Identity=26.9230769230769, Blast_Score=73, Evalue=2e-13, Organism=Drosophila melanogaster, GI85724864, Length=221, Percent_Identity=29.4117647058824, Blast_Score=72, Evalue=4e-13, Organism=Drosophila melanogaster, GI24580555, Length=221, Percent_Identity=29.4117647058824, Blast_Score=72, Evalue=4e-13, Organism=Drosophila melanogaster, GI85816269, Length=221, Percent_Identity=29.4117647058824, Blast_Score=72, Evalue=5e-13, Organism=Drosophila melanogaster, GI24580553, Length=221, Percent_Identity=29.4117647058824, Blast_Score=72, Evalue=5e-13, Organism=Drosophila melanogaster, GI23397593, Length=240, Percent_Identity=27.9166666666667, Blast_Score=69, Evalue=2e-12, Organism=Drosophila melanogaster, GI28574533, Length=247, Percent_Identity=27.1255060728745, Blast_Score=69, Evalue=2e-12, Organism=Drosophila melanogaster, GI221512771, Length=225, Percent_Identity=22.6666666666667, Blast_Score=67, Evalue=2e-11, Organism=Drosophila melanogaster, GI28574150, Length=225, Percent_Identity=24.8888888888889, Blast_Score=66, Evalue=2e-11, Organism=Drosophila melanogaster, GI116007328, Length=225, Percent_Identity=24.8888888888889, Blast_Score=66, Evalue=2e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003439 - InterPro: IPR017871 - InterPro: IPR003593 - InterPro: IPR012700 - InterPro: IPR013563 [H]
Pfam domain/function: PF00005 ABC_tran; PF08352 oligo_HPY [H]
EC number: NA
Molecular weight: Translated: 30164; Mature: 30164
Theoretical pI: Translated: 5.19; Mature: 5.19
Prosite motif: PS00211 ABC_TRANSPORTER_1 ; PS50893 ABC_TRANSPORTER_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MISARSLDPAGERLPEAVQPLLKVRGLTRLYGVQKGCQDVSFDLYPGEVLGIVGESGSGK CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEECCCCCCH STLLSLLSGRCPPDRGSIDYRGKEGDWFDLYSASEAQRRTLLRTEWGFVEQNPRDGLRMG HHHHHHHHCCCCCCCCCCCCCCCCCCEEECCCCCHHHHHHHHHHHCCCCCCCCCHHHHHH VSAGANIGERLMAQGVRNYQQLRGAALDWLTQVEIDPQRIDDLPRTFSGGMQQRLQIARN HHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHH LVSSPRLVFMDEPTGGLDVSVQARLLDLLRGLVRELDLAVVIVTHDLAVARLLADRLMVM HHCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHCCEEEEEHHHHHHHHHHHHHHHHH RRSEVVESGLTDQILDDPQHPYSQLLVSSVLQP HHHHHHHCCCHHHHHCCCCCHHHHHHHHHHCCC >Mature Secondary Structure MISARSLDPAGERLPEAVQPLLKVRGLTRLYGVQKGCQDVSFDLYPGEVLGIVGESGSGK CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEECCCCCCH STLLSLLSGRCPPDRGSIDYRGKEGDWFDLYSASEAQRRTLLRTEWGFVEQNPRDGLRMG HHHHHHHHCCCCCCCCCCCCCCCCCCEEECCCCCHHHHHHHHHHHCCCCCCCCCHHHHHH VSAGANIGERLMAQGVRNYQQLRGAALDWLTQVEIDPQRIDDLPRTFSGGMQQRLQIARN HHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHH LVSSPRLVFMDEPTGGLDVSVQARLLDLLRGLVRELDLAVVIVTHDLAVARLLADRLMVM HHCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHCCEEEEEHHHHHHHHHHHHHHHHH RRSEVVESGLTDQILDDPQHPYSQLLVSSVLQP HHHHHHHCCCHHHHHCCCCCHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 2155230; 1840580; 7610040; 9278503 [H]