| Definition | Pseudomonas syringae pv. syringae B728a, complete genome. |
|---|---|
| Accession | NC_007005 |
| Length | 6,093,698 |
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The map label for this gene is phnI [H]
Identifier: 66045493
GI number: 66045493
Start: 2618095
End: 2619174
Strand: Direct
Name: phnI [H]
Synonym: Psyr_2253
Alternate gene names: 66045493
Gene position: 2618095-2619174 (Clockwise)
Preceding gene: 66045492
Following gene: 66045494
Centisome position: 42.96
GC content: 63.43
Gene sequence:
>1080_bases ATGTACGTCGCGGTCAAGGGTGGCGAACAGGCCATCGATAACGCTCACCGCCTGCTGGCCAGCAGGCGTCGTGGCGACAC CGGCATCGCTGAACTCGACGTCGAGCAGATCCGTCAGCAACTGCCGCTGGCGGTAGCACGGGTCATGAGCGAAGGGTCGC TGTACGACCCGCAGCTGGCTGCGCTGGCGATCAAGCAATCGGCGGGCGATCTGATCGAAGCGATCTTCCTGCTGCGCGCC TATCGCACCACGTTGACGCGCTTCTGCGCCAGCCTGCCCATCGACACCTCGGACATGCAGCTCAACCGTCGCTTGTCGGC CACGTTCAAGGACCTCCCCGGCGGTCAATTGCTGGGGCCGACCTTCGACTACACCCACCGCTTGCTGGATTTCACCTTGC TGGCCGAAGGTGAGCACCCGGGCCCGGAAGTCACCCCGCACGCCACGCTGGAGCCCTGTCCGCGAGTGCTCGGGTTGCTG GCCAGGGAAGGGCTGATGAAGCCCGAAGTCGACGATGGCGAGCGCGTGGCGGACATCACCCGCGAGCCCCTGGAGTATCC GTCCAGCCGTGCCCAGCGCCTGCAGGCACTGGCGCGTGGCGATGAGGGGTTCCTGCTGGCGCTGGGTTATTCGACCCAGC GCGGTTATGGCCGTAATCACCCGTTCGCCGGAGAAATCCGTATCGGCGAAGTGGAAGTCTGGATCGAACCTGAAGAACTG GGTTTCCCGATTGTGATTGGCGACATCGAAGTCACCGAATGCGAGATGGTCAATCAGTTCGTCGGCTCGGCCAGCGAACC CGCGCAGTTTACCCGGGGTTATGGCCTGGCGTTCGGTAACGCGGAGCGCAAGGCGATGGGCATGGCACTGGTGGACCGTT CGCTGCGCGCCGAGGAATTCAATGAAGAGATCGTCTCACCAGCCCAGCAGGAAGAGTTCGTCCTGGCGCACTGCGACAAC GTTGAAGCGGCGGGTTTCGTCTCGCACCTCAAGCTGCCGCATTACGTGGACTTCCAGTCCGAACTGGAGCTGATTCGCAA GCTGCGCACGTCTGCACCGAAACCGGGGAGCGACCAATGA
Upstream 100 bases:
>100_bases AAGCGCGTAATGTTTTTCCTTGCGGGCTGGATGTGTTCTTTGTCTCGGGCAATCGACTGCTCGGCTTGCCACGCAGCACT CGCGTGCAGGAGTGTGCCTG
Downstream 100 bases:
>100_bases CTCATGCACCGATGAACACCGCACAGCAAAGGCCTGCACGGGACGAGGCCTACAACTTCGCTTATCTGGACGAGCAGACC AAACGCATGATTCGCCGCGC
Product: phosphonate metabolism
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 359; Mature: 359
Protein sequence:
>359_residues MYVAVKGGEQAIDNAHRLLASRRRGDTGIAELDVEQIRQQLPLAVARVMSEGSLYDPQLAALAIKQSAGDLIEAIFLLRA YRTTLTRFCASLPIDTSDMQLNRRLSATFKDLPGGQLLGPTFDYTHRLLDFTLLAEGEHPGPEVTPHATLEPCPRVLGLL AREGLMKPEVDDGERVADITREPLEYPSSRAQRLQALARGDEGFLLALGYSTQRGYGRNHPFAGEIRIGEVEVWIEPEEL GFPIVIGDIEVTECEMVNQFVGSASEPAQFTRGYGLAFGNAERKAMGMALVDRSLRAEEFNEEIVSPAQQEEFVLAHCDN VEAAGFVSHLKLPHYVDFQSELELIRKLRTSAPKPGSDQ
Sequences:
>Translated_359_residues MYVAVKGGEQAIDNAHRLLASRRRGDTGIAELDVEQIRQQLPLAVARVMSEGSLYDPQLAALAIKQSAGDLIEAIFLLRA YRTTLTRFCASLPIDTSDMQLNRRLSATFKDLPGGQLLGPTFDYTHRLLDFTLLAEGEHPGPEVTPHATLEPCPRVLGLL AREGLMKPEVDDGERVADITREPLEYPSSRAQRLQALARGDEGFLLALGYSTQRGYGRNHPFAGEIRIGEVEVWIEPEEL GFPIVIGDIEVTECEMVNQFVGSASEPAQFTRGYGLAFGNAERKAMGMALVDRSLRAEEFNEEIVSPAQQEEFVLAHCDN VEAAGFVSHLKLPHYVDFQSELELIRKLRTSAPKPGSDQ >Mature_359_residues MYVAVKGGEQAIDNAHRLLASRRRGDTGIAELDVEQIRQQLPLAVARVMSEGSLYDPQLAALAIKQSAGDLIEAIFLLRA YRTTLTRFCASLPIDTSDMQLNRRLSATFKDLPGGQLLGPTFDYTHRLLDFTLLAEGEHPGPEVTPHATLEPCPRVLGLL AREGLMKPEVDDGERVADITREPLEYPSSRAQRLQALARGDEGFLLALGYSTQRGYGRNHPFAGEIRIGEVEVWIEPEEL GFPIVIGDIEVTECEMVNQFVGSASEPAQFTRGYGLAFGNAERKAMGMALVDRSLRAEEFNEEIVSPAQQEEFVLAHCDN VEAAGFVSHLKLPHYVDFQSELELIRKLRTSAPKPGSDQ
Specific function: Belongs to an operon involved in alkylphosphonate uptake and C-P lyase. Exact function not known [H]
COG id: COG3626
COG function: function code P; Uncharacterized enzyme of phosphonate metabolism
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the phnI family [H]
Homologues:
Organism=Escherichia coli, GI1790537, Length=349, Percent_Identity=66.4756446991404, Blast_Score=464, Evalue=1e-132,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008773 [H]
Pfam domain/function: PF05861 PhnI [H]
EC number: NA
Molecular weight: Translated: 39643; Mature: 39643
Theoretical pI: Translated: 4.68; Mature: 4.68
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MYVAVKGGEQAIDNAHRLLASRRRGDTGIAELDVEQIRQQLPLAVARVMSEGSLYDPQLA CEEEECCCHHHHHHHHHHHHHHCCCCCCHHHHCHHHHHHHHHHHHHHHHHCCCCCCCHHH ALAIKQSAGDLIEAIFLLRAYRTTLTRFCASLPIDTSDMQLNRRLSATFKDLPGGQLLGP HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCCCC TFDYTHRLLDFTLLAEGEHPGPEVTPHATLEPCPRVLGLLAREGLMKPEVDDGERVADIT CHHHHHHHHHHHEEECCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCHHHHHHH REPLEYPSSRAQRLQALARGDEGFLLALGYSTQRGYGRNHPFAGEIRIGEVEVWIEPEEL HHHHCCCHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCCCEEEEEEEEEECHHHC GFPIVIGDIEVTECEMVNQFVGSASEPAQFTRGYGLAFGNAERKAMGMALVDRSLRAEEF CCCEEECCCCHHHHHHHHHHHCCCCCCHHHHCCCCEEECCCHHHHHHHHHHHHHHHHHHH NEEIVSPAQQEEFVLAHCDNVEAAGFVSHLKLPHYVDFQSELELIRKLRTSAPKPGSDQ HHHHCCCCCCCCEEEEECCCCCHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCCCCC >Mature Secondary Structure MYVAVKGGEQAIDNAHRLLASRRRGDTGIAELDVEQIRQQLPLAVARVMSEGSLYDPQLA CEEEECCCHHHHHHHHHHHHHHCCCCCCHHHHCHHHHHHHHHHHHHHHHHCCCCCCCHHH ALAIKQSAGDLIEAIFLLRAYRTTLTRFCASLPIDTSDMQLNRRLSATFKDLPGGQLLGP HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCCCC TFDYTHRLLDFTLLAEGEHPGPEVTPHATLEPCPRVLGLLAREGLMKPEVDDGERVADIT CHHHHHHHHHHHEEECCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCHHHHHHH REPLEYPSSRAQRLQALARGDEGFLLALGYSTQRGYGRNHPFAGEIRIGEVEVWIEPEEL HHHHCCCHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCCCEEEEEEEEEECHHHC GFPIVIGDIEVTECEMVNQFVGSASEPAQFTRGYGLAFGNAERKAMGMALVDRSLRAEEF CCCEEECCCCHHHHHHHHHHHCCCCCCHHHHCCCCEEECCCHHHHHHHHHHHHHHHHHHH NEEIVSPAQQEEFVLAHCDNVEAAGFVSHLKLPHYVDFQSELELIRKLRTSAPKPGSDQ HHHHCCCCCCCCEEEEECCCCCHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 2155230; 1840580; 7610040; 9278503 [H]