| Definition | Pseudomonas syringae pv. syringae B728a, complete genome. |
|---|---|
| Accession | NC_007005 |
| Length | 6,093,698 |
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The map label for this gene is 66045455
Identifier: 66045455
GI number: 66045455
Start: 2575434
End: 2576912
Strand: Direct
Name: 66045455
Synonym: Psyr_2215
Alternate gene names: NA
Gene position: 2575434-2576912 (Clockwise)
Preceding gene: 66045454
Following gene: 66045456
Centisome position: 42.26
GC content: 62.27
Gene sequence:
>1479_bases ATGAGCAGCCTGAATGCCTATGGCGTCGTGCAGATCAATGGCGTGTATCTGGCGGTGGTTGCCGATGCGTTGATGGAGGC CGTGCACTGGCCCGCTGATCTGAATCCCCATCCGTTGACCCGGGGAGCGCTGCGCGGGGTGTTTACCTTGCGTGGCAAAC CGGTGCCATTGGTCGACCTGCGGGCTCAACTGGCGGAGGGCGGCGATATGTCTTCGCCGACGCCACTGGTCGCGATTCTC AAGTATGGCGGCGGTTACCTCGGGCTGGCGATCGATGCGGTGTGCGACATTCTCAAGGCCCGTGATTCTCAGTTCAGCCC ACTGGGGCCCGAGGGCAGCGCTGTCGGGCTGCTGCCCTCTCTGCTGCTCGGCTCTGAAGAGTCGCGGATGATCTACAAGC TTGATCTTGCCTTCATGAGTGGTTTGCCAGGCGTACTGTTCGCTGCCGATCCCAACGCGCAAGTGCTCAAGGACGAGGCG CTGGCCGCCAAGAACCGTTTGCTGCATTACCTGGTGTTCGAGTGCGACGGCCGTAACTTCTGTATCGATGCCAGCGTTGT GACCGAGTTGGTGGACGAACCCGAGATCACGGCGTCGGATTTTGCCAGTGACTGCTGCTTTGGCGTCACCTCGGTGCGTG GCACCAAGGTCCCGGCGCTCAACCTGTCCGAAGTGCTTGGCCTGGACCACCAGCGTCAGACGTCCAAGCCGCAGTTGCTG CTGTTGACTGCGCCGGACGGGCGGGTCTGCGGGTTCGGCTACGACCGCATGGTCGCCATTCAGCGTCAGGATCCGGACAG TCTGTTGGCGGCGCCGGGCTATGGCCTGCCGCATCCAGAGCTGCTCGCCGGGGTAATGAACCTGGAGGAGGGGCAGCAAG CCTTGTTGCTTGATCATCCGATGCTGTTGCAGCGTCCGGAAGTCAAAAGCTACACCCAGGTTTACCAACACGACGTCAAA CCTGCCCAGGCCTCGCACGATGTGACCAAGGCCATGCTGCGCCACGCCTGCCTGCTGTTCGATGCGCCGACCCGCTTCGT CGCACCGTTGAGCCAGATCGTGGAAATCATGAGCATGCCGCAGCAACTGATCGGCCTGTCGCAGCCGGAAACGCATTTGC TGGGACAGTTCAATCTGCGCGGCGAACAGGTGCCGCTGATCTGCCTGAGCAGCCTGTTGGGCGAAGGGGCACAGGTCCAG GGCGAAGCGTCGCGTGTATTGATCGTGCGTGGCGAGCGGCTGTGCTTCGGTTTTGCCGTGAACCGCGTCGATGCGATCGA CGCCTTCAATCAGTTCGATCCGGCCATGCTGGAACAAGGCTGGCAAGCCAGTACCGGCAAGGGCATTTCGGTCAATGACC GGGTCCGTTCGCTGGTCAGCGTCGGCAGTCAGGAGCGCAGCTGGCGCGCGACCCTGCTCGATCTGCAGGGCCTGGCCAGA CAACTGGAATGCAACGTCGATCAGCGCCGCGCGGTGTAA
Upstream 100 bases:
>100_bases TGTCGGCGCAGGAAGTCGAGACCCTGATTGTCGAGCTGCATAAAGCCAACCTGACTGGCTATACCGAAACGCTGAACAAG GTATCCATCGGACAACCTGC
Downstream 100 bases:
>100_bases TCAGTCTGAACCGAATGCGCCGCGCGTGGCCTTATTTGAGTGTCCACCAGCGGAGTCAACGACCATGACTGACAAGAAAG ACGAGAAAAAACCGGAACCG
Product: CheW-like protein
Products: NA
Alternate protein names: CheW-Like Domain-Containing Protein; Positive Regulator Of CheA Protein Activity
Number of amino acids: Translated: 492; Mature: 491
Protein sequence:
>492_residues MSSLNAYGVVQINGVYLAVVADALMEAVHWPADLNPHPLTRGALRGVFTLRGKPVPLVDLRAQLAEGGDMSSPTPLVAIL KYGGGYLGLAIDAVCDILKARDSQFSPLGPEGSAVGLLPSLLLGSEESRMIYKLDLAFMSGLPGVLFAADPNAQVLKDEA LAAKNRLLHYLVFECDGRNFCIDASVVTELVDEPEITASDFASDCCFGVTSVRGTKVPALNLSEVLGLDHQRQTSKPQLL LLTAPDGRVCGFGYDRMVAIQRQDPDSLLAAPGYGLPHPELLAGVMNLEEGQQALLLDHPMLLQRPEVKSYTQVYQHDVK PAQASHDVTKAMLRHACLLFDAPTRFVAPLSQIVEIMSMPQQLIGLSQPETHLLGQFNLRGEQVPLICLSSLLGEGAQVQ GEASRVLIVRGERLCFGFAVNRVDAIDAFNQFDPAMLEQGWQASTGKGISVNDRVRSLVSVGSQERSWRATLLDLQGLAR QLECNVDQRRAV
Sequences:
>Translated_492_residues MSSLNAYGVVQINGVYLAVVADALMEAVHWPADLNPHPLTRGALRGVFTLRGKPVPLVDLRAQLAEGGDMSSPTPLVAIL KYGGGYLGLAIDAVCDILKARDSQFSPLGPEGSAVGLLPSLLLGSEESRMIYKLDLAFMSGLPGVLFAADPNAQVLKDEA LAAKNRLLHYLVFECDGRNFCIDASVVTELVDEPEITASDFASDCCFGVTSVRGTKVPALNLSEVLGLDHQRQTSKPQLL LLTAPDGRVCGFGYDRMVAIQRQDPDSLLAAPGYGLPHPELLAGVMNLEEGQQALLLDHPMLLQRPEVKSYTQVYQHDVK PAQASHDVTKAMLRHACLLFDAPTRFVAPLSQIVEIMSMPQQLIGLSQPETHLLGQFNLRGEQVPLICLSSLLGEGAQVQ GEASRVLIVRGERLCFGFAVNRVDAIDAFNQFDPAMLEQGWQASTGKGISVNDRVRSLVSVGSQERSWRATLLDLQGLAR QLECNVDQRRAV >Mature_491_residues SSLNAYGVVQINGVYLAVVADALMEAVHWPADLNPHPLTRGALRGVFTLRGKPVPLVDLRAQLAEGGDMSSPTPLVAILK YGGGYLGLAIDAVCDILKARDSQFSPLGPEGSAVGLLPSLLLGSEESRMIYKLDLAFMSGLPGVLFAADPNAQVLKDEAL AAKNRLLHYLVFECDGRNFCIDASVVTELVDEPEITASDFASDCCFGVTSVRGTKVPALNLSEVLGLDHQRQTSKPQLLL LTAPDGRVCGFGYDRMVAIQRQDPDSLLAAPGYGLPHPELLAGVMNLEEGQQALLLDHPMLLQRPEVKSYTQVYQHDVKP AQASHDVTKAMLRHACLLFDAPTRFVAPLSQIVEIMSMPQQLIGLSQPETHLLGQFNLRGEQVPLICLSSLLGEGAQVQG EASRVLIVRGERLCFGFAVNRVDAIDAFNQFDPAMLEQGWQASTGKGISVNDRVRSLVSVGSQERSWRATLLDLQGLARQ LECNVDQRRAV
Specific function: Unknown
COG id: COG0835
COG function: function code NT; Chemotaxis signal transduction protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 53238; Mature: 53107
Theoretical pI: Translated: 5.06; Mature: 5.06
Prosite motif: PS50851 CHEW
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSSLNAYGVVQINGVYLAVVADALMEAVHWPADLNPHPLTRGALRGVFTLRGKPVPLVDL CCCCCCEEEEEECCCHHHHHHHHHHHHHCCCCCCCCCCCCHHHHCCEEEECCCCCCHHHH RAQLAEGGDMSSPTPLVAILKYGGGYLGLAIDAVCDILKARDSQFSPLGPEGSAVGLLPS HHHHHCCCCCCCCCCEEEEEHHCCCEEHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHH LLLGSEESRMIYKLDLAFMSGLPGVLFAADPNAQVLKDEALAAKNRLLHYLVFECDGRNF HHHCCCCCCEEEEEEHHHHCCCCCEEEECCCCHHHHHHHHHHHHHHEEEEEEEEECCCCE CIDASVVTELVDEPEITASDFASDCCFGVTSVRGTKVPALNLSEVLGLDHQRQTSKPQLL EECHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCHHHHHCCCCCCCCCCCCEE LLTAPDGRVCGFGYDRMVAIQRQDPDSLLAAPGYGLPHPELLAGVMNLEEGQQALLLDHP EEECCCCCEECCCCCEEEEEECCCCCCEEECCCCCCCCHHHHHHHHHHCCCCCEEEECCC MLLQRPEVKSYTQVYQHDVKPAQASHDVTKAMLRHACLLFDAPTRFVAPLSQIVEIMSMP HHHCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCC QQLIGLSQPETHLLGQFNLRGEQVPLICLSSLLGEGAQVQGEASRVLIVRGERLCFGFAV HHHHCCCCCCHHEEEEECCCCCCCHHHHHHHHHCCCCEECCCCCEEEEEECCEEEEEHHH NRVDAIDAFNQFDPAMLEQGWQASTGKGISVNDRVRSLVSVGSQERSWRATLLDLQGLAR HHHHHHHHHCCCCHHHHHCCCCCCCCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHH QLECNVDQRRAV HHHCCCHHHCCC >Mature Secondary Structure SSLNAYGVVQINGVYLAVVADALMEAVHWPADLNPHPLTRGALRGVFTLRGKPVPLVDL CCCCCEEEEEECCCHHHHHHHHHHHHHCCCCCCCCCCCCHHHHCCEEEECCCCCCHHHH RAQLAEGGDMSSPTPLVAILKYGGGYLGLAIDAVCDILKARDSQFSPLGPEGSAVGLLPS HHHHHCCCCCCCCCCEEEEEHHCCCEEHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHH LLLGSEESRMIYKLDLAFMSGLPGVLFAADPNAQVLKDEALAAKNRLLHYLVFECDGRNF HHHCCCCCCEEEEEEHHHHCCCCCEEEECCCCHHHHHHHHHHHHHHEEEEEEEEECCCCE CIDASVVTELVDEPEITASDFASDCCFGVTSVRGTKVPALNLSEVLGLDHQRQTSKPQLL EECHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCHHHHHCCCCCCCCCCCCEE LLTAPDGRVCGFGYDRMVAIQRQDPDSLLAAPGYGLPHPELLAGVMNLEEGQQALLLDHP EEECCCCCEECCCCCEEEEEECCCCCCEEECCCCCCCCHHHHHHHHHHCCCCCEEEECCC MLLQRPEVKSYTQVYQHDVKPAQASHDVTKAMLRHACLLFDAPTRFVAPLSQIVEIMSMP HHHCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCC QQLIGLSQPETHLLGQFNLRGEQVPLICLSSLLGEGAQVQGEASRVLIVRGERLCFGFAV HHHHCCCCCCHHEEEEECCCCCCCHHHHHHHHHCCCCEECCCCCEEEEEECCEEEEEHHH NRVDAIDAFNQFDPAMLEQGWQASTGKGISVNDRVRSLVSVGSQERSWRATLLDLQGLAR HHHHHHHHHCCCCHHHHHCCCCCCCCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHH QLECNVDQRRAV HHHCCCHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA