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The map label for this gene is bdlA [H]

Identifier: 66045454

GI number: 66045454

Start: 2573305

End: 2575437

Strand: Direct

Name: bdlA [H]

Synonym: Psyr_2214

Alternate gene names: 66045454

Gene position: 2573305-2575437 (Clockwise)

Preceding gene: 66045448

Following gene: 66045455

Centisome position: 42.23

GC content: 57.38

Gene sequence:

>2133_bases
ATGTCGACCACAATTGAAAGCACCCACAGGGACAAGGCCGGGCTGGAACTTGATCTTCACTCGCTGATGACGGCCATTGA
CCGCTCCCAGGCGATGATCGAGTTCGATCTTGATGGCAATATCCTGCGGGCCAATACCAATTTTCTGGATTGCGTCGGTT
ATCGGCTGGATGAGGTCCAAGGTCGGCATCACCGCATGTTCTGCACGCCGGAACATGCATCCAGCGTCGAATATGTGACG
TTTTGGGAAAAACTCGGCAAGGGCGCTTTCGACGAAGGGCAGTACAAGCGCCTGGGCAAGAACGGGCGCGAGATCTGGTT
GCAGGCGACTTATAACCCGGTGTTCGACGAGCAGGGCAACCCGTTCAAGGTGGTGAAGTTCGCCACAGACGTCACTGCGC
AACGCAAGTCCAATGCCGAGTACGAAGGCAAGGTCGCGGCCATCGATCGCTCGCAGGGCATCATCGAGTTCGACCTGAAC
GGTCGCGTGCTCAACGCCAACGAAAACTTTCTCAAGGTCCTGGGCTATCGTCTGGATGAGATTCAAGGCCAGCACCATCG
CATGTTTTGCGAAGACGACTACCTTAACAGCCCGGCCTACCGTGCCTTCTGGGCCAAGCTCGAACGTGGCGAGTATGACT
CCGGGGAATACAAACGCATCGGCAAGAATGGTCGCGAGCTGTGGATCAGCGCCACTTACAACCCGATATTCGACCCGGAT
GGTCGTCCTTACAAGGTCGTGAAGTTCGCCAACGATGTGACCGAGAGCCGCATTCGTCAGGCTGAGTCCGCAGGCAAGGT
GACGGCCATCGAACGTTCTCAGGCGGTGATCGAATTCGATCTGACGGGCAAGGTGCTGCACGCCAACCGCAATTTTCTGG
CGGTATTCGGCTACGATCTCGATGAAATCGTCGGCGAGCACCACCGCATGTTCTGCTCCGAGGAATTCGTCAGCAGCCTG
CAGTATCGTGAGCTCTGGGAGAAGCTGGGGCGCGGCGAGTACGACGCCAACGAATACAAGCGCAAGCGCAAGGATGGTAA
GGAAATCTGGATTCAGGCCACCTACAACCCGATTTTCGATGCACAGGGCAAACCCTACAAGATCGTCAAGTTCGCGCTCG
ACGTGACTGTGGCCAAGGAAACCAGCGTCGAGGACCAGGGCAAGGTGAATGCCATCGACCGTGCCCAGGCCGTCATCGAA
TTCGACATGGCCGGCAACATCATCACCGCCAATGCCAACTTCCTCAAAGCGCTGGGTTATGGCCTGCTGGAAATCAAAGG
CAAGCATCACCGTATCTTCTGTGAGGAAGAGTATGTGCGCGGCACCGAGTACCGTGAGTTCTGGCACGGGCTGGGGCAGG
GCGAGTTCTACTCCGGGCGCTTCATGCGTGTCAGCAAATACGGGCAGAAAATCTGGATTCAGGCGACGTACAGCCCGATT
TTCGACCACGACGGCTTGCCGTTCAAAGTGGTGAAATTCGCCACTGATATTACCCGTCAAGTCGAGATGGAACAGGCGAT
AGAGGCCAAGACCCGCGCCATGGGCGAGTCGGTGAAAGCACTGATGAACGCCATTTCCTACGTCGCACAAAGCACCGAGA
CAGCCACCGATCTGGCCAGAATGACGCGTGAGCAGGCCCGTTCCGGTTCGCAGACGCTGGTCAAGGCGTCCGACGCGATG
GGCATGATTGCCAAGTCCGCCGAGGGCATTCAGGACATCATTCAGGTGATCAGCGAGATCGCCAGTCAGACCAACATGCT
GGCCTTCAACGCGGCCATCGAAGCGGCCAGGGCCGGTGAGCATGGCCTGGGCTTTTCGGTAGTCGCCGACGAGGTGCGCA
AGCTGGCCGAGAAGTCCTCGCGTGCGACCAAGGAAATCAACAAGCTGATTCTGGAAACGGTCAGCCGGATCGAGTCGGGC
AACGAGATTTCGCGCAGTGCCGGCGAAGCCTTCGAACACATCGTGGAAGGCGTGATGCAGACCACCCAGGCGATCGACGG
GATCAATACTGCAACCGAGAAGCAACGCCTGTCGGCGCAGGAAGTCGAGACCCTGATTGTCGAGCTGCATAAAGCCAACC
TGACTGGCTATACCGAAACGCTGAACAAGGTATCCATCGGACAACCTGCATGA

Upstream 100 bases:

>100_bases
AGCCTCCATAGTCCACACATCGGTGTGTCTGACAGGGCTCGCGGAAACCGGCGCTTTATAACAATACTTCCATAGATGCT
TACTCGCAGAGTATTTCCAC

Downstream 100 bases:

>100_bases
GCAGCCTGAATGCCTATGGCGTCGTGCAGATCAATGGCGTGTATCTGGCGGTGGTTGCCGATGCGTTGATGGAGGCCGTG
CACTGGCCCGCTGATCTGAA

Product: PAS

Products: NA

Alternate protein names: Chemotaxis regulator BdlA [H]

Number of amino acids: Translated: 710; Mature: 709

Protein sequence:

>710_residues
MSTTIESTHRDKAGLELDLHSLMTAIDRSQAMIEFDLDGNILRANTNFLDCVGYRLDEVQGRHHRMFCTPEHASSVEYVT
FWEKLGKGAFDEGQYKRLGKNGREIWLQATYNPVFDEQGNPFKVVKFATDVTAQRKSNAEYEGKVAAIDRSQGIIEFDLN
GRVLNANENFLKVLGYRLDEIQGQHHRMFCEDDYLNSPAYRAFWAKLERGEYDSGEYKRIGKNGRELWISATYNPIFDPD
GRPYKVVKFANDVTESRIRQAESAGKVTAIERSQAVIEFDLTGKVLHANRNFLAVFGYDLDEIVGEHHRMFCSEEFVSSL
QYRELWEKLGRGEYDANEYKRKRKDGKEIWIQATYNPIFDAQGKPYKIVKFALDVTVAKETSVEDQGKVNAIDRAQAVIE
FDMAGNIITANANFLKALGYGLLEIKGKHHRIFCEEEYVRGTEYREFWHGLGQGEFYSGRFMRVSKYGQKIWIQATYSPI
FDHDGLPFKVVKFATDITRQVEMEQAIEAKTRAMGESVKALMNAISYVAQSTETATDLARMTREQARSGSQTLVKASDAM
GMIAKSAEGIQDIIQVISEIASQTNMLAFNAAIEAARAGEHGLGFSVVADEVRKLAEKSSRATKEINKLILETVSRIESG
NEISRSAGEAFEHIVEGVMQTTQAIDGINTATEKQRLSAQEVETLIVELHKANLTGYTETLNKVSIGQPA

Sequences:

>Translated_710_residues
MSTTIESTHRDKAGLELDLHSLMTAIDRSQAMIEFDLDGNILRANTNFLDCVGYRLDEVQGRHHRMFCTPEHASSVEYVT
FWEKLGKGAFDEGQYKRLGKNGREIWLQATYNPVFDEQGNPFKVVKFATDVTAQRKSNAEYEGKVAAIDRSQGIIEFDLN
GRVLNANENFLKVLGYRLDEIQGQHHRMFCEDDYLNSPAYRAFWAKLERGEYDSGEYKRIGKNGRELWISATYNPIFDPD
GRPYKVVKFANDVTESRIRQAESAGKVTAIERSQAVIEFDLTGKVLHANRNFLAVFGYDLDEIVGEHHRMFCSEEFVSSL
QYRELWEKLGRGEYDANEYKRKRKDGKEIWIQATYNPIFDAQGKPYKIVKFALDVTVAKETSVEDQGKVNAIDRAQAVIE
FDMAGNIITANANFLKALGYGLLEIKGKHHRIFCEEEYVRGTEYREFWHGLGQGEFYSGRFMRVSKYGQKIWIQATYSPI
FDHDGLPFKVVKFATDITRQVEMEQAIEAKTRAMGESVKALMNAISYVAQSTETATDLARMTREQARSGSQTLVKASDAM
GMIAKSAEGIQDIIQVISEIASQTNMLAFNAAIEAARAGEHGLGFSVVADEVRKLAEKSSRATKEINKLILETVSRIESG
NEISRSAGEAFEHIVEGVMQTTQAIDGINTATEKQRLSAQEVETLIVELHKANLTGYTETLNKVSIGQPA
>Mature_709_residues
STTIESTHRDKAGLELDLHSLMTAIDRSQAMIEFDLDGNILRANTNFLDCVGYRLDEVQGRHHRMFCTPEHASSVEYVTF
WEKLGKGAFDEGQYKRLGKNGREIWLQATYNPVFDEQGNPFKVVKFATDVTAQRKSNAEYEGKVAAIDRSQGIIEFDLNG
RVLNANENFLKVLGYRLDEIQGQHHRMFCEDDYLNSPAYRAFWAKLERGEYDSGEYKRIGKNGRELWISATYNPIFDPDG
RPYKVVKFANDVTESRIRQAESAGKVTAIERSQAVIEFDLTGKVLHANRNFLAVFGYDLDEIVGEHHRMFCSEEFVSSLQ
YRELWEKLGRGEYDANEYKRKRKDGKEIWIQATYNPIFDAQGKPYKIVKFALDVTVAKETSVEDQGKVNAIDRAQAVIEF
DMAGNIITANANFLKALGYGLLEIKGKHHRIFCEEEYVRGTEYREFWHGLGQGEFYSGRFMRVSKYGQKIWIQATYSPIF
DHDGLPFKVVKFATDITRQVEMEQAIEAKTRAMGESVKALMNAISYVAQSTETATDLARMTREQARSGSQTLVKASDAMG
MIAKSAEGIQDIIQVISEIASQTNMLAFNAAIEAARAGEHGLGFSVVADEVRKLAEKSSRATKEINKLILETVSRIESGN
EISRSAGEAFEHIVEGVMQTTQAIDGINTATEKQRLSAQEVETLIVELHKANLTGYTETLNKVSIGQPA

Specific function: Essential for biofilm dispersion by sensing environmental cues. May be involved in sensing and transducing signals within cells, resulting in the modulation of c-di-GMP levels, swimming motility and adhesiveness of the bacterial cell surface [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Integral Membrane Protein. Inner Membrane [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 PAS (PER-ARNT-SIM) domains [H]

Homologues:

Organism=Escherichia coli, GI1788195, Length=197, Percent_Identity=38.0710659898477, Blast_Score=118, Evalue=1e-27,
Organism=Escherichia coli, GI2367378, Length=196, Percent_Identity=36.734693877551, Blast_Score=112, Evalue=7e-26,
Organism=Escherichia coli, GI1788194, Length=209, Percent_Identity=35.8851674641148, Blast_Score=109, Evalue=5e-25,
Organism=Escherichia coli, GI1787690, Length=196, Percent_Identity=38.265306122449, Blast_Score=109, Evalue=6e-25,
Organism=Escherichia coli, GI1789453, Length=160, Percent_Identity=40.625, Blast_Score=98, Evalue=2e-21,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004090
- InterPro:   IPR004089
- InterPro:   IPR001610
- InterPro:   IPR000014
- InterPro:   IPR000700
- InterPro:   IPR013656
- InterPro:   IPR013655 [H]

Pfam domain/function: PF00015 MCPsignal; PF08447 PAS_3; PF08448 PAS_4 [H]

EC number: NA

Molecular weight: Translated: 80101; Mature: 79970

Theoretical pI: Translated: 5.90; Mature: 5.90

Prosite motif: PS50112 PAS ; PS50113 PAC ; PS50111 CHEMOTAXIS_TRANSDUC_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSTTIESTHRDKAGLELDLHSLMTAIDRSQAMIEFDLDGNILRANTNFLDCVGYRLDEVQ
CCCCCCCCCCCCCCCEEEHHHHHHHHCCCCEEEEEECCCCEEEECCCHHHHHCCHHHHCC
GRHHRMFCTPEHASSVEYVTFWEKLGKGAFDEGQYKRLGKNGREIWLQATYNPVFDEQGN
CCCCEEEECCCCCCCCHHHHHHHHHCCCCCCCCHHHHHCCCCCEEEEEEECCCCCCCCCC
PFKVVKFATDVTAQRKSNAEYEGKVAAIDRSQGIIEFDLNGRVLNANENFLKVLGYRLDE
CEEEEEEEHHHHHHHCCCCCCCCEEEEEECCCCEEEEECCCEEECCCHHHHHHHHHHHHH
IQGQHHRMFCEDDYLNSPAYRAFWAKLERGEYDSGEYKRIGKNGRELWISATYNPIFDPD
HCCCCCEEEECCCCCCCCHHHHHHHHHHCCCCCCCCHHHHCCCCCEEEEEECCCCCCCCC
GRPYKVVKFANDVTESRIRQAESAGKVTAIERSQAVIEFDLTGKVLHANRNFLAVFGYDL
CCCEEEEEEHHHHHHHHHHHHHHCCCEEEEECCCEEEEEECCCEEEECCCCEEEEECCCH
DEIVGEHHRMFCSEEFVSSLQYRELWEKLGRGEYDANEYKRKRKDGKEIWIQATYNPIFD
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCEEEEEEECCCCCC
AQGKPYKIVKFALDVTVAKETSVEDQGKVNAIDRAQAVIEFDMAGNIITANANFLKALGY
CCCCCEEEEEEEEEEEEECCCCCCCCCCCCHHHHHHHHEEEECCCCEEECCCHHHHHHCC
GLLEIKGKHHRIFCEEEYVRGTEYREFWHGLGQGEFYSGRFMRVSKYGQKIWIQATYSPI
CEEEECCCCCEEEECHHHHCCCHHHHHHHCCCCCCCCCCCEEEEECCCCEEEEEEECCCC
FDHDGLPFKVVKFATDITRQVEMEQAIEAKTRAMGESVKALMNAISYVAQSTETATDLAR
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH
MTREQARSGSQTLVKASDAMGMIAKSAEGIQDIIQVISEIASQTNMLAFNAAIEAARAGE
HHHHHHHCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEHHHHHHHHCCC
HGLGFSVVADEVRKLAEKSSRATKEINKLILETVSRIESGNEISRSAGEAFEHIVEGVMQ
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH
TTQAIDGINTATEKQRLSAQEVETLIVELHKANLTGYTETLNKVSIGQPA
HHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCCCCC
>Mature Secondary Structure 
STTIESTHRDKAGLELDLHSLMTAIDRSQAMIEFDLDGNILRANTNFLDCVGYRLDEVQ
CCCCCCCCCCCCCCEEEHHHHHHHHCCCCEEEEEECCCCEEEECCCHHHHHCCHHHHCC
GRHHRMFCTPEHASSVEYVTFWEKLGKGAFDEGQYKRLGKNGREIWLQATYNPVFDEQGN
CCCCEEEECCCCCCCCHHHHHHHHHCCCCCCCCHHHHHCCCCCEEEEEEECCCCCCCCCC
PFKVVKFATDVTAQRKSNAEYEGKVAAIDRSQGIIEFDLNGRVLNANENFLKVLGYRLDE
CEEEEEEEHHHHHHHCCCCCCCCEEEEEECCCCEEEEECCCEEECCCHHHHHHHHHHHHH
IQGQHHRMFCEDDYLNSPAYRAFWAKLERGEYDSGEYKRIGKNGRELWISATYNPIFDPD
HCCCCCEEEECCCCCCCCHHHHHHHHHHCCCCCCCCHHHHCCCCCEEEEEECCCCCCCCC
GRPYKVVKFANDVTESRIRQAESAGKVTAIERSQAVIEFDLTGKVLHANRNFLAVFGYDL
CCCEEEEEEHHHHHHHHHHHHHHCCCEEEEECCCEEEEEECCCEEEECCCCEEEEECCCH
DEIVGEHHRMFCSEEFVSSLQYRELWEKLGRGEYDANEYKRKRKDGKEIWIQATYNPIFD
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCEEEEEEECCCCCC
AQGKPYKIVKFALDVTVAKETSVEDQGKVNAIDRAQAVIEFDMAGNIITANANFLKALGY
CCCCCEEEEEEEEEEEEECCCCCCCCCCCCHHHHHHHHEEEECCCCEEECCCHHHHHHCC
GLLEIKGKHHRIFCEEEYVRGTEYREFWHGLGQGEFYSGRFMRVSKYGQKIWIQATYSPI
CEEEECCCCCEEEECHHHHCCCHHHHHHHCCCCCCCCCCCEEEEECCCCEEEEEEECCCC
FDHDGLPFKVVKFATDITRQVEMEQAIEAKTRAMGESVKALMNAISYVAQSTETATDLAR
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH
MTREQARSGSQTLVKASDAMGMIAKSAEGIQDIIQVISEIASQTNMLAFNAAIEAARAGE
HHHHHHHCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEHHHHHHHHCCC
HGLGFSVVADEVRKLAEKSSRATKEINKLILETVSRIESGNEISRSAGEAFEHIVEGVMQ
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH
TTQAIDGINTATEKQRLSAQEVETLIVELHKANLTGYTETLNKVSIGQPA
HHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 10984043 [H]