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The map label for this gene is 66045432

Identifier: 66045432

GI number: 66045432

Start: 2547814

End: 2548428

Strand: Direct

Name: 66045432

Synonym: Psyr_2192

Alternate gene names: NA

Gene position: 2547814-2548428 (Clockwise)

Preceding gene: 66045430

Following gene: 66045433

Centisome position: 41.81

GC content: 57.89

Gene sequence:

>615_bases
ATGACTAATCAAATCAAGACATCGCCAATACGCGGTCCCTCCGACCACAGCGTTCGCGACCAGGTTGTCGAAGCGGCAAC
ACAGCATTTCGGCCACTACGGCTATGAGAAAACCACGGTCTCCGATCTGGCCAAGGCCATTGGTTTTTCCAAGGCCTACA
TCTACAAGTTCTTCGACTCCAAGCAAGCTATCGGCGAAGTGATCTGCTCGAACCGGCTGGCGATGATCATGGCGCTGGTG
AACTCGGCCATCAGCGACGCGCCAACAGCCTCCGAGAGGCTGCGGCGCCTGTTCCGCTCGCTTGCGGAGGCGGGTAGCGA
TCTGTTTTTTCACGACCGGAAGCTGTATGACATAGCCGCTGTCGCAGGCCGTGATCAGTGGCCTTCTGCTGCCGCGCACG
ACGAACGTATTCGCCAGCTCATCCAGCAAATCCTTCTTGAGGGCAGGGAGTCCGGAGAGTTCGAGCGCAAGACACCTCTG
GATGAGGCCGTTCAGGCCATTCACCTGGTCATGCGTCCGTACATCAACCCGGTGCAATTGCAATACAACCTCGACATCGT
GTCGACGGCCCCGGTCCATCTGTCGGCGTTGATACTGCGAAGTCTGGCACCCTGA

Upstream 100 bases:

>100_bases
AAATCGGGCGCATGGAAATTCCTTGAGGTGATCAGGTCGTGACTATATTACGATTTGGTCACTTGTTGTCAACGAGTGTT
CACATAGCTAAGCTGGAAAC

Downstream 100 bases:

>100_bases
ATTTGTGACCATTGACTAATTTGGTCACTTTACGGAGAATCGTTTCCCTGCTCACTTGATTTCAAGTAAGGGATCCCATG
CTCCTGTCCAGACCCAACAC

Product: regulatory protein, TetR

Products: NA

Alternate protein names: Transcriptional Regulator TetR Family; Transcriptional Regulator; Regulatory Protein TetR; Transcriptional Regulator Protein TetR Family; Transcriptional Regulator Protein; TetR/AcrR Family Transcriptional Regulator; Transcriptional Activator; TetR-Family Transcriptional Regulatory Protein; HTH-Type Transcriptional Regulator Luxr

Number of amino acids: Translated: 204; Mature: 203

Protein sequence:

>204_residues
MTNQIKTSPIRGPSDHSVRDQVVEAATQHFGHYGYEKTTVSDLAKAIGFSKAYIYKFFDSKQAIGEVICSNRLAMIMALV
NSAISDAPTASERLRRLFRSLAEAGSDLFFHDRKLYDIAAVAGRDQWPSAAAHDERIRQLIQQILLEGRESGEFERKTPL
DEAVQAIHLVMRPYINPVQLQYNLDIVSTAPVHLSALILRSLAP

Sequences:

>Translated_204_residues
MTNQIKTSPIRGPSDHSVRDQVVEAATQHFGHYGYEKTTVSDLAKAIGFSKAYIYKFFDSKQAIGEVICSNRLAMIMALV
NSAISDAPTASERLRRLFRSLAEAGSDLFFHDRKLYDIAAVAGRDQWPSAAAHDERIRQLIQQILLEGRESGEFERKTPL
DEAVQAIHLVMRPYINPVQLQYNLDIVSTAPVHLSALILRSLAP
>Mature_203_residues
TNQIKTSPIRGPSDHSVRDQVVEAATQHFGHYGYEKTTVSDLAKAIGFSKAYIYKFFDSKQAIGEVICSNRLAMIMALVN
SAISDAPTASERLRRLFRSLAEAGSDLFFHDRKLYDIAAVAGRDQWPSAAAHDERIRQLIQQILLEGRESGEFERKTPLD
EAVQAIHLVMRPYINPVQLQYNLDIVSTAPVHLSALILRSLAP

Specific function: Unknown

COG id: COG1309

COG function: function code K; Transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 22794; Mature: 22663

Theoretical pI: Translated: 7.79; Mature: 7.79

Prosite motif: PS50977 HTH_TETR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTNQIKTSPIRGPSDHSVRDQVVEAATQHFGHYGYEKTTVSDLAKAIGFSKAYIYKFFDS
CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCHHHHHHHHHHH
KQAIGEVICSNRLAMIMALVNSAISDAPTASERLRRLFRSLAEAGSDLFFHDRKLYDIAA
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCHHCCHHHHHHHH
VAGRDQWPSAAAHDERIRQLIQQILLEGRESGEFERKTPLDEAVQAIHLVMRPYINPVQL
HHCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCEEE
QYNLDIVSTAPVHLSALILRSLAP
EEECEEECCCHHHHHHHHHHHCCC
>Mature Secondary Structure 
TNQIKTSPIRGPSDHSVRDQVVEAATQHFGHYGYEKTTVSDLAKAIGFSKAYIYKFFDS
CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCHHHHHHHHHHH
KQAIGEVICSNRLAMIMALVNSAISDAPTASERLRRLFRSLAEAGSDLFFHDRKLYDIAA
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCHHCCHHHHHHHH
VAGRDQWPSAAAHDERIRQLIQQILLEGRESGEFERKTPLDEAVQAIHLVMRPYINPVQL
HHCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCEEE
QYNLDIVSTAPVHLSALILRSLAP
EEECEEECCCHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA