| Definition | Pseudomonas syringae pv. syringae B728a, complete genome. |
|---|---|
| Accession | NC_007005 |
| Length | 6,093,698 |
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The map label for this gene is fabG [H]
Identifier: 66045424
GI number: 66045424
Start: 2538172
End: 2538960
Strand: Direct
Name: fabG [H]
Synonym: Psyr_2184
Alternate gene names: 66045424
Gene position: 2538172-2538960 (Clockwise)
Preceding gene: 66045423
Following gene: 66045425
Centisome position: 41.65
GC content: 62.23
Gene sequence:
>789_bases ATGAGTGTTCTCAATCGGCTGGTTCCCTATGCAGGGCTGCGCGTCCTGATTTCCGGCGGTGCAGCCGGGATTGGTGAGGT GTTGGCGGCGGCTTACCTGGAAGCGGGGGCAAAGGTACACGTGTGCGATGTCAGCGAGGCGGCCATTGCGGCATTCCTCG ATCGCCATCCAGGCAGCGTCGCCACCCACGCAGACGTCGCTGATCCGGCGCAGATCGAAGCGGTATTCAGGGTGCAGCGG GCACGCTTCGATGGTCTTGATGTGCTGATCAACAACGCCGGGATCGCCGGTCCGACGGCAGGGATCGATGCCATTAGCGA AGAAGAGTGGCAGCGCACCATCGACATCAATCTCACCGGGCAGTACCGCTTCGCTCATCACGCTGTGCCGTTGCTCAAGG CCTCACCCAACGCTCACCTGATCCATATCGCCTCCGTCGCCGGTCGCCTGGGCTATGCCTGGCGCACCCCGTATGCCGCG ACCAAGTGGGCGATTGTCGGGCTGATGAAGTCGCTGGCGTCCGAGTTGGGTGAAAGTGATATCCGCGTCAATGCCTTGCT GCCCGGTATCGTCGAAGGCCCGCGCATGGATGGAGTGATCCGGGCCCGTGCGCAACAAATGAACGTGCCGGAGGAGGAGA TGCGCGAGGAGTACCTGAAAAAGATCTCGCTCAAGCGCATGGTCACCGCCGAAGACGTCGCCGCGATGGCGCTCTTTTTA TGCTCGCCGGCCGCCCGCAACGTAACGGGGCAGGCCATCAGTGTGGATGGCAACGTCGAGTACCTCTGA
Upstream 100 bases:
>100_bases CAGCTGTCACCGACGACATCATGCAGGCTGCCGACTCTCTGACGCGCCTGATCGCAAAGAGCGACCGCTCCAGGTCGCGT GTCTCGGGAGTGAAAAAAGC
Downstream 100 bases:
>100_bases GGATTCGCCCGATAGCAACGATGACCGGACCTCGTCCGAGTCATGTTCCACATCAGACTTCTCGCCAACAACAAGAATGG AGAATGCTCATGCCCAAAAA
Product: short chain dehydrogenase
Products: NA
Alternate protein names: 3-ketoacyl-acyl carrier protein reductase [H]
Number of amino acids: Translated: 262; Mature: 261
Protein sequence:
>262_residues MSVLNRLVPYAGLRVLISGGAAGIGEVLAAAYLEAGAKVHVCDVSEAAIAAFLDRHPGSVATHADVADPAQIEAVFRVQR ARFDGLDVLINNAGIAGPTAGIDAISEEEWQRTIDINLTGQYRFAHHAVPLLKASPNAHLIHIASVAGRLGYAWRTPYAA TKWAIVGLMKSLASELGESDIRVNALLPGIVEGPRMDGVIRARAQQMNVPEEEMREEYLKKISLKRMVTAEDVAAMALFL CSPAARNVTGQAISVDGNVEYL
Sequences:
>Translated_262_residues MSVLNRLVPYAGLRVLISGGAAGIGEVLAAAYLEAGAKVHVCDVSEAAIAAFLDRHPGSVATHADVADPAQIEAVFRVQR ARFDGLDVLINNAGIAGPTAGIDAISEEEWQRTIDINLTGQYRFAHHAVPLLKASPNAHLIHIASVAGRLGYAWRTPYAA TKWAIVGLMKSLASELGESDIRVNALLPGIVEGPRMDGVIRARAQQMNVPEEEMREEYLKKISLKRMVTAEDVAAMALFL CSPAARNVTGQAISVDGNVEYL >Mature_261_residues SVLNRLVPYAGLRVLISGGAAGIGEVLAAAYLEAGAKVHVCDVSEAAIAAFLDRHPGSVATHADVADPAQIEAVFRVQRA RFDGLDVLINNAGIAGPTAGIDAISEEEWQRTIDINLTGQYRFAHHAVPLLKASPNAHLIHIASVAGRLGYAWRTPYAAT KWAIVGLMKSLASELGESDIRVNALLPGIVEGPRMDGVIRARAQQMNVPEEEMREEYLKKISLKRMVTAEDVAAMALFLC SPAARNVTGQAISVDGNVEYL
Specific function: Unknown
COG id: COG1028
COG function: function code IQR; Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases)
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the short-chain dehydrogenases/reductases (SDR) family [H]
Homologues:
Organism=Homo sapiens, GI66933014, Length=229, Percent_Identity=31.4410480349345, Blast_Score=112, Evalue=4e-25, Organism=Homo sapiens, GI59889578, Length=230, Percent_Identity=31.7391304347826, Blast_Score=102, Evalue=2e-22, Organism=Homo sapiens, GI32483357, Length=260, Percent_Identity=27.6923076923077, Blast_Score=94, Evalue=1e-19, Organism=Homo sapiens, GI15277342, Length=257, Percent_Identity=28.0155642023346, Blast_Score=89, Evalue=3e-18, Organism=Homo sapiens, GI31542939, Length=224, Percent_Identity=30.3571428571429, Blast_Score=86, Evalue=4e-17, Organism=Homo sapiens, GI19923817, Length=257, Percent_Identity=23.3463035019455, Blast_Score=78, Evalue=7e-15, Organism=Homo sapiens, GI210032110, Length=190, Percent_Identity=28.9473684210526, Blast_Score=77, Evalue=2e-14, Organism=Homo sapiens, GI109715829, Length=189, Percent_Identity=29.1005291005291, Blast_Score=75, Evalue=8e-14, Organism=Homo sapiens, GI5031737, Length=173, Percent_Identity=28.3236994219653, Blast_Score=74, Evalue=1e-13, Organism=Homo sapiens, GI38348362, Length=177, Percent_Identity=31.0734463276836, Blast_Score=74, Evalue=1e-13, Organism=Homo sapiens, GI38424085, Length=177, Percent_Identity=31.0734463276836, Blast_Score=73, Evalue=3e-13, Organism=Homo sapiens, GI126723750, Length=152, Percent_Identity=32.2368421052632, Blast_Score=72, Evalue=6e-13, Organism=Homo sapiens, GI20149619, Length=187, Percent_Identity=26.2032085561497, Blast_Score=72, Evalue=6e-13, Organism=Homo sapiens, GI40807363, Length=197, Percent_Identity=26.3959390862944, Blast_Score=72, Evalue=7e-13, Organism=Homo sapiens, GI40254992, Length=249, Percent_Identity=26.1044176706827, Blast_Score=70, Evalue=2e-12, Organism=Homo sapiens, GI224922801, Length=167, Percent_Identity=31.7365269461078, Blast_Score=70, Evalue=2e-12, Organism=Homo sapiens, GI4503301, Length=209, Percent_Identity=27.2727272727273, Blast_Score=70, Evalue=2e-12, Organism=Homo sapiens, GI4504505, Length=244, Percent_Identity=28.2786885245902, Blast_Score=70, Evalue=3e-12, Organism=Homo sapiens, GI142976729, Length=184, Percent_Identity=23.3695652173913, Blast_Score=67, Evalue=1e-11, Organism=Homo sapiens, GI7705925, Length=249, Percent_Identity=25.7028112449799, Blast_Score=67, Evalue=1e-11, Organism=Escherichia coli, GI87082100, Length=252, Percent_Identity=33.7301587301587, Blast_Score=115, Evalue=3e-27, Organism=Escherichia coli, GI1787335, Length=253, Percent_Identity=29.6442687747036, Blast_Score=107, Evalue=8e-25, Organism=Escherichia coli, GI87082160, Length=249, Percent_Identity=28.9156626506024, Blast_Score=103, Evalue=1e-23, Organism=Escherichia coli, GI1789057, Length=250, Percent_Identity=28.4, Blast_Score=99, Evalue=3e-22, Organism=Escherichia coli, GI1787905, Length=250, Percent_Identity=28.8, Blast_Score=95, Evalue=6e-21, Organism=Escherichia coli, GI1786812, Length=255, Percent_Identity=29.8039215686275, Blast_Score=94, Evalue=8e-21, Organism=Escherichia coli, GI1790717, Length=258, Percent_Identity=27.5193798449612, Blast_Score=89, Evalue=4e-19, Organism=Escherichia coli, GI2367365, Length=250, Percent_Identity=29.6, Blast_Score=80, Evalue=1e-16, Organism=Escherichia coli, GI1787820, Length=237, Percent_Identity=26.1603375527426, Blast_Score=76, Evalue=2e-15, Organism=Escherichia coli, GI1788459, Length=177, Percent_Identity=28.8135593220339, Blast_Score=74, Evalue=1e-14, Organism=Escherichia coli, GI2367175, Length=260, Percent_Identity=28.8461538461538, Blast_Score=74, Evalue=1e-14, Organism=Escherichia coli, GI1789208, Length=248, Percent_Identity=25.4032258064516, Blast_Score=71, Evalue=8e-14, Organism=Escherichia coli, GI1789378, Length=251, Percent_Identity=25.0996015936255, Blast_Score=62, Evalue=3e-11, Organism=Escherichia coli, GI1787526, Length=249, Percent_Identity=26.5060240963855, Blast_Score=61, Evalue=6e-11, Organism=Caenorhabditis elegans, GI17555706, Length=247, Percent_Identity=27.5303643724696, Blast_Score=108, Evalue=3e-24, Organism=Caenorhabditis elegans, GI17560676, Length=247, Percent_Identity=27.9352226720648, Blast_Score=102, Evalue=2e-22, Organism=Caenorhabditis elegans, GI25147288, Length=249, Percent_Identity=30.1204819277108, Blast_Score=102, Evalue=3e-22, Organism=Caenorhabditis elegans, GI17508895, Length=212, Percent_Identity=27.3584905660377, Blast_Score=87, Evalue=7e-18, Organism=Caenorhabditis elegans, GI17538182, Length=196, Percent_Identity=31.1224489795918, Blast_Score=86, Evalue=1e-17, Organism=Caenorhabditis elegans, GI17561402, Length=263, Percent_Identity=23.574144486692, Blast_Score=77, Evalue=8e-15, Organism=Caenorhabditis elegans, GI17557780, Length=227, Percent_Identity=28.1938325991189, Blast_Score=77, Evalue=9e-15, Organism=Caenorhabditis elegans, GI115534694, Length=253, Percent_Identity=27.6679841897233, Blast_Score=76, Evalue=2e-14, Organism=Caenorhabditis elegans, GI193203117, Length=195, Percent_Identity=26.1538461538462, Blast_Score=75, Evalue=4e-14, Organism=Caenorhabditis elegans, GI193203115, Length=194, Percent_Identity=26.2886597938144, Blast_Score=75, Evalue=5e-14, Organism=Caenorhabditis elegans, GI17564282, Length=195, Percent_Identity=28.7179487179487, Blast_Score=75, Evalue=5e-14, Organism=Caenorhabditis elegans, GI17559104, Length=262, Percent_Identity=27.8625954198473, Blast_Score=74, Evalue=9e-14, Organism=Caenorhabditis elegans, GI17544670, Length=268, Percent_Identity=27.6119402985075, Blast_Score=73, Evalue=1e-13, Organism=Caenorhabditis elegans, GI71994600, Length=263, Percent_Identity=27.7566539923954, Blast_Score=72, Evalue=2e-13, Organism=Caenorhabditis elegans, GI17567345, Length=195, Percent_Identity=26.6666666666667, Blast_Score=71, Evalue=5e-13, Organism=Caenorhabditis elegans, GI17562910, Length=256, Percent_Identity=26.953125, Blast_Score=67, Evalue=1e-11, Organism=Caenorhabditis elegans, GI17562904, Length=272, Percent_Identity=27.5735294117647, Blast_Score=65, Evalue=5e-11, Organism=Caenorhabditis elegans, GI17563726, Length=266, Percent_Identity=26.3157894736842, Blast_Score=64, Evalue=8e-11, Organism=Saccharomyces cerevisiae, GI6322861, Length=187, Percent_Identity=32.620320855615, Blast_Score=86, Evalue=8e-18, Organism=Saccharomyces cerevisiae, GI6323882, Length=239, Percent_Identity=27.6150627615063, Blast_Score=84, Evalue=3e-17, Organism=Saccharomyces cerevisiae, GI6324126, Length=262, Percent_Identity=26.3358778625954, Blast_Score=75, Evalue=1e-14, Organism=Saccharomyces cerevisiae, GI6322227, Length=222, Percent_Identity=26.5765765765766, Blast_Score=66, Evalue=7e-12, Organism=Drosophila melanogaster, GI21355319, Length=251, Percent_Identity=27.8884462151394, Blast_Score=107, Evalue=7e-24, Organism=Drosophila melanogaster, GI281364892, Length=200, Percent_Identity=30, Blast_Score=82, Evalue=3e-16, Organism=Drosophila melanogaster, GI24643142, Length=251, Percent_Identity=28.2868525896414, Blast_Score=77, Evalue=8e-15, Organism=Drosophila melanogaster, GI24644337, Length=264, Percent_Identity=28.4090909090909, Blast_Score=77, Evalue=1e-14, Organism=Drosophila melanogaster, GI24644339, Length=256, Percent_Identity=27.734375, Blast_Score=75, Evalue=3e-14, Organism=Drosophila melanogaster, GI24639444, Length=259, Percent_Identity=24.3243243243243, Blast_Score=75, Evalue=6e-14, Organism=Drosophila melanogaster, GI28571526, Length=253, Percent_Identity=27.2727272727273, Blast_Score=74, Evalue=8e-14, Organism=Drosophila melanogaster, GI23397609, Length=248, Percent_Identity=27.4193548387097, Blast_Score=73, Evalue=1e-13, Organism=Drosophila melanogaster, GI18859837, Length=202, Percent_Identity=28.7128712871287, Blast_Score=71, Evalue=7e-13, Organism=Drosophila melanogaster, GI21357041, Length=199, Percent_Identity=28.1407035175879, Blast_Score=69, Evalue=3e-12, Organism=Drosophila melanogaster, GI17737361, Length=195, Percent_Identity=27.6923076923077, Blast_Score=69, Evalue=4e-12, Organism=Drosophila melanogaster, GI24581726, Length=219, Percent_Identity=28.310502283105, Blast_Score=66, Evalue=3e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011284 - InterPro: IPR002198 - InterPro: IPR002347 - InterPro: IPR016040 - InterPro: IPR020904 [H]
Pfam domain/function: PF00106 adh_short [H]
EC number: =1.1.1.100 [H]
Molecular weight: Translated: 27987; Mature: 27856
Theoretical pI: Translated: 6.16; Mature: 6.16
Prosite motif: PS00061 ADH_SHORT
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSVLNRLVPYAGLRVLISGGAAGIGEVLAAAYLEAGAKVHVCDVSEAAIAAFLDRHPGSV CCHHHHHHHHHCEEEEEECCCCCHHHHHHHHHHHCCCEEEEECCHHHHHHHHHHCCCCCC ATHADVADPAQIEAVFRVQRARFDGLDVLINNAGIAGPTAGIDAISEEEWQRTIDINLTG CCCCCCCCHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCHHHHHEEEEEEEEC QYRFAHHAVPLLKASPNAHLIHIASVAGRLGYAWRTPYAATKWAIVGLMKSLASELGESD CEEHHHHCCHHEECCCCCEEEEHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCC IRVNALLPGIVEGPRMDGVIRARAQQMNVPEEEMREEYLKKISLKRMVTAEDVAAMALFL EEEEEECCCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CSPAARNVTGQAISVDGNVEYL HCCHHCCCCCCEEEECCCEECC >Mature Secondary Structure SVLNRLVPYAGLRVLISGGAAGIGEVLAAAYLEAGAKVHVCDVSEAAIAAFLDRHPGSV CHHHHHHHHHCEEEEEECCCCCHHHHHHHHHHHCCCEEEEECCHHHHHHHHHHCCCCCC ATHADVADPAQIEAVFRVQRARFDGLDVLINNAGIAGPTAGIDAISEEEWQRTIDINLTG CCCCCCCCHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCHHHHHEEEEEEEEC QYRFAHHAVPLLKASPNAHLIHIASVAGRLGYAWRTPYAATKWAIVGLMKSLASELGESD CEEHHHHCCHHEECCCCCEEEEHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCC IRVNALLPGIVEGPRMDGVIRARAQQMNVPEEEMREEYLKKISLKRMVTAEDVAAMALFL EEEEEECCCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CSPAARNVTGQAISVDGNVEYL HCCHHCCCCCCEEEECCCEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 10360571 [H]