| Definition | Pseudomonas syringae pv. syringae B728a, complete genome. |
|---|---|
| Accession | NC_007005 |
| Length | 6,093,698 |
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The map label for this gene is 66045421
Identifier: 66045421
GI number: 66045421
Start: 2535193
End: 2536302
Strand: Direct
Name: 66045421
Synonym: Psyr_2181
Alternate gene names: NA
Gene position: 2535193-2536302 (Clockwise)
Preceding gene: 66045420
Following gene: 66045422
Centisome position: 41.6
GC content: 57.3
Gene sequence:
>1110_bases ATGCTGCAGGTTCTGGTCTGGGGAGGCTCGTTCTTCCTGATGGCCGTCATGGCCGACTCGATCATGAAAGAAACCGGCTG GGCCAGCCAATGGGTGTATGGCGCACTGTCTCTGAGCATTCTGGTTTCCGCGATGCTGGCGCCGTTGACCAGCCGGCTTA TTGCCCAGTATGGCGGTCGCCCTATTCTGGCCAGTAGCGGTCTGGGCGTCGCCATCGGGTTGTTTCTGATGGCCAGTTCG ACCTCGTTGCCGATGTTTTTTTTGTCTTGGGCTGTAATAGGTGTCGGTATGGCGCTGGGGTTGTATGAAGCGCTATTCGC CGCTTTAGGCTCTCTCTATGGGGAGCGAGCGGGCAGTGCGATTACGGGCATCACGCTTGTGTCCGGTTTTGCTACAACAC TGTCATGGCCCGCGGTTGCGCTGGTCATCGAACACGTTGGTTGGCGCACGACGTGCGTGGCTTATGGAGTGTTATTGGTC ATTGTCGTGGCGCCACTTTATCTCTGGGTTCTGGCGAGGGGCACGGGACCACTCATAAAAAGTCAGGTAGCGGGTGGCGA AAGTTTCTCAATCGACCGGCGGATCTACTTGTTGCTTACGCTGATTTTTGCTTTGGGTGCAGTGATCATGACGGCGATGT CGGTCCAGCTGATTTCATTGTTGCAGGGGCAGGGTTACTCGCTTGCAGCCGCCGTCGGACTGAGCGCATTGCTGGGGCCG AGCCAGGTAGGATCACGTGTTTTACAGGTGTTTTCGCGTACGCGACACCCGATCTGGACGACGTTGATCTCCGTGATATT CGTGGCAATTGGTCTGCTGATTGTGACCATCGCACCGGCAATGACTGCCCTGGGGCTGGTGATCTATGGCGCGGGTAATG GTTTGCGGGCGATCGTTCGAGGACTGCTGCCATTGGCCCTCATGTCGCCTACCCATTATGTTTTGCTGATGGGGCGCATG GCTCGGCCTTCGCTCATAGGACAAGCCTTGACCCCCCTTGCAGGCGGTTACCTGTTGCAGGCCTGGGGCGCTGGCGGTGT GCTTGCGGGACTGAGTGTGCTTGCCGTATTGAACGTGCTCTTGGTCTTGCTGCTCATTCGACTGGTATGA
Upstream 100 bases:
>100_bases TGCTCAGCTACTCACTCTATCCGCCTTTCTCACCACTGATGACATTGTCTTGAATCAACAAACACGACTGCCTGGCGTAT TCGGCATTTTCATTTTGGGG
Downstream 100 bases:
>100_bases AAAAGAACGGCTCTGATTGCCATCCTTCCTGAGGATCCCGGCCGGCATCATTGGCGGTCAGCGACTCGAGTTCTTTATGA TGATTTTGGCGATGAAACGG
Product: major facilitator transporter
Products: NA
Alternate protein names: Facilitator Superfamily Protein; Facilitator Superfamily Transporter; MFS Permease; Transporter Permease Protein; Facilitator Superfamily Transporter Transmembrane Protein; MFS Transporter; MFS Family Transporter; Transport Protein Transmembrane; Facilitator Superfamily MFS_1 Domain-Containing Protein; Facilitator Superfamily; Transmembrane Protein; MSF Transporter Transmembrane Protein; MFS Family Permease; TRANSPORTER Facilitator Superfamily; Facilitator Family Transporter; Facilitator Superfamily Permease; Msf Transporter Protein
Number of amino acids: Translated: 369; Mature: 369
Protein sequence:
>369_residues MLQVLVWGGSFFLMAVMADSIMKETGWASQWVYGALSLSILVSAMLAPLTSRLIAQYGGRPILASSGLGVAIGLFLMASS TSLPMFFLSWAVIGVGMALGLYEALFAALGSLYGERAGSAITGITLVSGFATTLSWPAVALVIEHVGWRTTCVAYGVLLV IVVAPLYLWVLARGTGPLIKSQVAGGESFSIDRRIYLLLTLIFALGAVIMTAMSVQLISLLQGQGYSLAAAVGLSALLGP SQVGSRVLQVFSRTRHPIWTTLISVIFVAIGLLIVTIAPAMTALGLVIYGAGNGLRAIVRGLLPLALMSPTHYVLLMGRM ARPSLIGQALTPLAGGYLLQAWGAGGVLAGLSVLAVLNVLLVLLLIRLV
Sequences:
>Translated_369_residues MLQVLVWGGSFFLMAVMADSIMKETGWASQWVYGALSLSILVSAMLAPLTSRLIAQYGGRPILASSGLGVAIGLFLMASS TSLPMFFLSWAVIGVGMALGLYEALFAALGSLYGERAGSAITGITLVSGFATTLSWPAVALVIEHVGWRTTCVAYGVLLV IVVAPLYLWVLARGTGPLIKSQVAGGESFSIDRRIYLLLTLIFALGAVIMTAMSVQLISLLQGQGYSLAAAVGLSALLGP SQVGSRVLQVFSRTRHPIWTTLISVIFVAIGLLIVTIAPAMTALGLVIYGAGNGLRAIVRGLLPLALMSPTHYVLLMGRM ARPSLIGQALTPLAGGYLLQAWGAGGVLAGLSVLAVLNVLLVLLLIRLV >Mature_369_residues MLQVLVWGGSFFLMAVMADSIMKETGWASQWVYGALSLSILVSAMLAPLTSRLIAQYGGRPILASSGLGVAIGLFLMASS TSLPMFFLSWAVIGVGMALGLYEALFAALGSLYGERAGSAITGITLVSGFATTLSWPAVALVIEHVGWRTTCVAYGVLLV IVVAPLYLWVLARGTGPLIKSQVAGGESFSIDRRIYLLLTLIFALGAVIMTAMSVQLISLLQGQGYSLAAAVGLSALLGP SQVGSRVLQVFSRTRHPIWTTLISVIFVAIGLLIVTIAPAMTALGLVIYGAGNGLRAIVRGLLPLALMSPTHYVLLMGRM ARPSLIGQALTPLAGGYLLQAWGAGGVLAGLSVLAVLNVLLVLLLIRLV
Specific function: Unknown
COG id: COG0477
COG function: function code GEPR; Permeases of the major facilitator superfamily
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 38525; Mature: 38525
Theoretical pI: Translated: 10.40; Mature: 10.40
Prosite motif: PS50850 MFS
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLQVLVWGGSFFLMAVMADSIMKETGWASQWVYGALSLSILVSAMLAPLTSRLIAQYGGR CEEEEEECHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC PILASSGLGVAIGLFLMASSTSLPMFFLSWAVIGVGMALGLYEALFAALGSLYGERAGSA CEEECCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCH ITGITLVSGFATTLSWPAVALVIEHVGWRTTCVAYGVLLVIVVAPLYLWVLARGTGPLIK HHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHH SQVAGGESFSIDRRIYLLLTLIFALGAVIMTAMSVQLISLLQGQGYSLAAAVGLSALLGP HHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCH SQVGSRVLQVFSRTRHPIWTTLISVIFVAIGLLIVTIAPAMTALGLVIYGAGNGLRAIVR HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCHHHHHH GLLPLALMSPTHYVLLMGRMARPSLIGQALTPLAGGYLLQAWGAGGVLAGLSVLAVLNVL HHHHHHHHCCCHHHHHHHHHCCHHHHHHHHHHHHCCHHHHHCCCCHHHHHHHHHHHHHHH LVLLLIRLV HHHHHHHHC >Mature Secondary Structure MLQVLVWGGSFFLMAVMADSIMKETGWASQWVYGALSLSILVSAMLAPLTSRLIAQYGGR CEEEEEECHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC PILASSGLGVAIGLFLMASSTSLPMFFLSWAVIGVGMALGLYEALFAALGSLYGERAGSA CEEECCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCH ITGITLVSGFATTLSWPAVALVIEHVGWRTTCVAYGVLLVIVVAPLYLWVLARGTGPLIK HHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHH SQVAGGESFSIDRRIYLLLTLIFALGAVIMTAMSVQLISLLQGQGYSLAAAVGLSALLGP HHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCH SQVGSRVLQVFSRTRHPIWTTLISVIFVAIGLLIVTIAPAMTALGLVIYGAGNGLRAIVR HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCHHHHHH GLLPLALMSPTHYVLLMGRMARPSLIGQALTPLAGGYLLQAWGAGGVLAGLSVLAVLNVL HHHHHHHHCCCHHHHHHHHHCCHHHHHHHHHHHHCCHHHHHCCCCHHHHHHHHHHHHHHH LVLLLIRLV HHHHHHHHC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA