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The map label for this gene is ycgE [C]

Identifier: 66045409

GI number: 66045409

Start: 2522663

End: 2523019

Strand: Direct

Name: ycgE [C]

Synonym: Psyr_2169

Alternate gene names: 66045409

Gene position: 2522663-2523019 (Clockwise)

Preceding gene: 66045408

Following gene: 66045420

Centisome position: 41.4

GC content: 57.14

Gene sequence:

>357_bases
ATGCTGGAACCAAGTCATAACGACGAGCTGCCGCCGATCCCCGGCAAACGCTACTTCACCATTGGTGAGGTCAGCGAGCT
CTGCGCGGTAAAACCGCACGTTCTGCGTTATTGGGAGCAGGAGTTTCCTCAACTCAACCCCGTCAAGCGACGCGGAAACC
GTCGGTATTATCAGCGCCAGGACGTGCTGATGATCCGCCAGATCCGCGGCCTGCTATACGATCAGGGCTTCACCATCGGT
GGCGCCCGACTTCGTCTTACCGCCGGTGAACCAAAGGATGACACCCAGCAGTACAAGCAGATGATTCGCGAGATGATTGC
GGAGCTGGAAGACGTACTCGTCATGCTCAAGGCGTAA

Upstream 100 bases:

>100_bases
CCTGGGAGAAATCCCAAGACCGGTGAAGAGATTCCGATTACGGCGCGCCGTGTGGTCACCTTTCGTCCAGGGCAGAAGCT
GAAGGCCCGAGTTGAGGCAT

Downstream 100 bases:

>100_bases
TTGAGCAGTCAGGATACTTCCAAAATTCAAATGCTTAGGGTATATTCCTCAACGTTTTCGCAGGTTGCAAAACAGATACA
CGCCTAGTCGGGGCGTAGCG

Product: regulatory protein, MerR

Products: NA

Alternate protein names: Transcriptional Regulator MerR Family; Transcriptional Regulator; Transcriptional Regulator MerR Family Protein; Transcription Regulator Protein; Regulatory Protein MerR; Transcriptional Regulator Merr Family; MerR-Family Transcriptional Regulator; Trancriptional Regulator MerR Family; Transcriptional Regulator Protein; MerR Family Regulatory Protein; Transcriptional Regulator MerR; TRANSCRIPTIONal REGULATOR MerR Family; Regulatory Protein Merr; MerR Family Regulatory Family; Transcriptional Regulator Protein MerR Family; Bacterial Transferase Hexapeptide Repeat Protein; Transcriptional Regulator Domain-Containing Protein; MerR Protein

Number of amino acids: Translated: 118; Mature: 118

Protein sequence:

>118_residues
MLEPSHNDELPPIPGKRYFTIGEVSELCAVKPHVLRYWEQEFPQLNPVKRRGNRRYYQRQDVLMIRQIRGLLYDQGFTIG
GARLRLTAGEPKDDTQQYKQMIREMIAELEDVLVMLKA

Sequences:

>Translated_118_residues
MLEPSHNDELPPIPGKRYFTIGEVSELCAVKPHVLRYWEQEFPQLNPVKRRGNRRYYQRQDVLMIRQIRGLLYDQGFTIG
GARLRLTAGEPKDDTQQYKQMIREMIAELEDVLVMLKA
>Mature_118_residues
MLEPSHNDELPPIPGKRYFTIGEVSELCAVKPHVLRYWEQEFPQLNPVKRRGNRRYYQRQDVLMIRQIRGLLYDQGFTIG
GARLRLTAGEPKDDTQQYKQMIREMIAELEDVLVMLKA

Specific function: Unknown

COG id: COG0789

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 13903; Mature: 13903

Theoretical pI: Translated: 9.00; Mature: 9.00

Prosite motif: PS50937 HTH_MERR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
4.2 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
4.2 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLEPSHNDELPPIPGKRYFTIGEVSELCAVKPHVLRYWEQEFPQLNPVKRRGNRRYYQRQ
CCCCCCCCCCCCCCCCCEEEHHHHHHHHHCCHHHHHHHHHHCCCCCHHHHCCCCCHHHHH
DVLMIRQIRGLLYDQGFTIGGARLRLTAGEPKDDTQQYKQMIREMIAELEDVLVMLKA
HHHHHHHHHHHHHHCCCEECCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MLEPSHNDELPPIPGKRYFTIGEVSELCAVKPHVLRYWEQEFPQLNPVKRRGNRRYYQRQ
CCCCCCCCCCCCCCCCCEEEHHHHHHHHHCCHHHHHHHHHHCCCCCHHHHCCCCCHHHHH
DVLMIRQIRGLLYDQGFTIGGARLRLTAGEPKDDTQQYKQMIREMIAELEDVLVMLKA
HHHHHHHHHHHHHHCCCEECCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA