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The map label for this gene is rfbN [H]

Identifier: 66045378

GI number: 66045378

Start: 2497022

End: 2497948

Strand: Direct

Name: rfbN [H]

Synonym: Psyr_2138

Alternate gene names: 66045378

Gene position: 2497022-2497948 (Clockwise)

Preceding gene: 66045377

Following gene: 66045380

Centisome position: 40.98

GC content: 58.68

Gene sequence:

>927_bases
ATGGCGCCATTGAGAGTGGCTTGTGTGATCCCGACCTACAACGGACGCAAGGATCTGGAACGTCTCCTGGATTCACTGGC
TGCGCAGACTGCCAGCTTCGATACGCTGATCGTGGACTCCAGTTCCTCGGATGGCACGCTGGAGCTGGCGCAAGCGCGAT
GTGCCAATGTGCTGCGCATCGACAGCAAGGATTTCAACCACGGCGGCACCCGGCAGATGATGGTCGATCTGCATCCCGAC
TATGACGTGTATGTCTTCATGACCCAGGATGCGTACGTTGAAGACATCAATGCCATTGCCAACATTCTGTTGCCCTTCGC
CGACCCGAAGGTCGGTGCTGTGTGCGGGCGACAGCTGCCGCACAAGGATGCCAACCTGCTGGCCCAGCATGCACGGTTGT
TCAATTACCCGCCGACCTCGCAGATCAAAACGCTGGCCGATGCCGGGACGCTGGGCATCAAGACGCCATTCATGTCCAAC
TCGTTTGCGGCCTATCGGGGCGAAGCGTTGCGGGCCATTGGCGGTTTCCCGCGGCATGTGATTCTTTCAGAAGACATGTA
CGTCACCGCGAAAATGCTCATCGATGGCTGGAAAGCGGCTTACGAAGGCTCGGCGGTCTGCCGTCACTCCCACAATTACA
GCCTGCGCGAAGAGTTTCGTCGTTACTTTGATATCGGTGTGTTCCAGGCCCGCGAAGCGTGGATCTACGAAACCTTTGGC
GGCATTGGTGGCGAGGGCATGCGTTACGTCAAGTCCGAGCTGAAATTCCTCGGTCCCCGGCGAATCCTCTGGTGGCCTGT
GTCGTTCGTGCGTAATGCGCTGAAGCTGCTGGCCTACAAGCTGAGCCGGCAGGAAAAACGCTTGCCCCGCGGCGTGAAGA
AGAAGCTCGGCATGTACGCGCGTTACTGGGACAGCCCCTACGCCTGA

Upstream 100 bases:

>100_bases
TGCTCGGCTGAGTGCATTCGAATGGTGGGGCGGGTACGCATGAGCTACTCTCAACAACGCTGACACAGTGGGCAACCGGA
CTTCGCCCTGGAGTATTGTT

Downstream 100 bases:

>100_bases
GTTGCGCCGCAGACCAGCCTGCGGCGCATGAGCAGGTCAGCTTTTCGCGGCTTCTTCGTCCAGACGGTCTGCCTCGAACA
GTTGCGCGAGGTCGGCCCTG

Product: glycosyl transferase family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 308; Mature: 307

Protein sequence:

>308_residues
MAPLRVACVIPTYNGRKDLERLLDSLAAQTASFDTLIVDSSSSDGTLELAQARCANVLRIDSKDFNHGGTRQMMVDLHPD
YDVYVFMTQDAYVEDINAIANILLPFADPKVGAVCGRQLPHKDANLLAQHARLFNYPPTSQIKTLADAGTLGIKTPFMSN
SFAAYRGEALRAIGGFPRHVILSEDMYVTAKMLIDGWKAAYEGSAVCRHSHNYSLREEFRRYFDIGVFQAREAWIYETFG
GIGGEGMRYVKSELKFLGPRRILWWPVSFVRNALKLLAYKLSRQEKRLPRGVKKKLGMYARYWDSPYA

Sequences:

>Translated_308_residues
MAPLRVACVIPTYNGRKDLERLLDSLAAQTASFDTLIVDSSSSDGTLELAQARCANVLRIDSKDFNHGGTRQMMVDLHPD
YDVYVFMTQDAYVEDINAIANILLPFADPKVGAVCGRQLPHKDANLLAQHARLFNYPPTSQIKTLADAGTLGIKTPFMSN
SFAAYRGEALRAIGGFPRHVILSEDMYVTAKMLIDGWKAAYEGSAVCRHSHNYSLREEFRRYFDIGVFQAREAWIYETFG
GIGGEGMRYVKSELKFLGPRRILWWPVSFVRNALKLLAYKLSRQEKRLPRGVKKKLGMYARYWDSPYA
>Mature_307_residues
APLRVACVIPTYNGRKDLERLLDSLAAQTASFDTLIVDSSSSDGTLELAQARCANVLRIDSKDFNHGGTRQMMVDLHPDY
DVYVFMTQDAYVEDINAIANILLPFADPKVGAVCGRQLPHKDANLLAQHARLFNYPPTSQIKTLADAGTLGIKTPFMSNS
FAAYRGEALRAIGGFPRHVILSEDMYVTAKMLIDGWKAAYEGSAVCRHSHNYSLREEFRRYFDIGVFQAREAWIYETFGG
IGGEGMRYVKSELKFLGPRRILWWPVSFVRNALKLLAYKLSRQEKRLPRGVKKKLGMYARYWDSPYA

Specific function: Unknown

COG id: COG0463

COG function: function code M; Glycosyltransferases involved in cell wall biogenesis

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyltransferase 2 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001173 [H]

Pfam domain/function: PF00535 Glycos_transf_2 [H]

EC number: NA

Molecular weight: Translated: 34792; Mature: 34661

Theoretical pI: Translated: 9.44; Mature: 9.44

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAPLRVACVIPTYNGRKDLERLLDSLAAQTASFDTLIVDSSSSDGTLELAQARCANVLRI
CCCEEEEEEEECCCCHHHHHHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHEEEE
DSKDFNHGGTRQMMVDLHPDYDVYVFMTQDAYVEDINAIANILLPFADPKVGAVCGRQLP
CCCCCCCCCCEEEEEEECCCCEEEEEEECCHHHHHHHHHHHHHHCCCCCCHHHHHCCCCC
HKDANLLAQHARLFNYPPTSQIKTLADAGTLGIKTPFMSNSFAAYRGEALRAIGGFPRHV
CCHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCEECCCCCCCCHHHHHHHHHHHCCCCCEE
ILSEDMYVTAKMLIDGWKAAYEGSAVCRHSHNYSLREEFRRYFDIGVFQAREAWIYETFG
EECCCHHHHHHHHHHHHHHHCCCCHHEECCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHC
GIGGEGMRYVKSELKFLGPRRILWWPVSFVRNALKLLAYKLSRQEKRLPRGVKKKLGMYA
CCCCHHHHHHHHHHHHCCCCEEEEECHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHH
RYWDSPYA
HHCCCCCC
>Mature Secondary Structure 
APLRVACVIPTYNGRKDLERLLDSLAAQTASFDTLIVDSSSSDGTLELAQARCANVLRI
CCEEEEEEEECCCCHHHHHHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHEEEE
DSKDFNHGGTRQMMVDLHPDYDVYVFMTQDAYVEDINAIANILLPFADPKVGAVCGRQLP
CCCCCCCCCCEEEEEEECCCCEEEEEEECCHHHHHHHHHHHHHHCCCCCCHHHHHCCCCC
HKDANLLAQHARLFNYPPTSQIKTLADAGTLGIKTPFMSNSFAAYRGEALRAIGGFPRHV
CCHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCEECCCCCCCCHHHHHHHHHHHCCCCCEE
ILSEDMYVTAKMLIDGWKAAYEGSAVCRHSHNYSLREEFRRYFDIGVFQAREAWIYETFG
EECCCHHHHHHHHHHHHHHHCCCCHHEECCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHC
GIGGEGMRYVKSELKFLGPRRILWWPVSFVRNALKLLAYKLSRQEKRLPRGVKKKLGMYA
CCCCHHHHHHHHHHHHCCCCEEEEECHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHH
RYWDSPYA
HHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1710759; 11677609 [H]