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The map label for this gene is 66045335

Identifier: 66045335

GI number: 66045335

Start: 2443112

End: 2443936

Strand: Direct

Name: 66045335

Synonym: Psyr_2095

Alternate gene names: NA

Gene position: 2443112-2443936 (Clockwise)

Preceding gene: 66045334

Following gene: 66045336

Centisome position: 40.09

GC content: 57.7

Gene sequence:

>825_bases
ATGGAATTGAATCTCTGGACCCAGAGCCTTCTTGCTGCAATGACTGCATTGTGGACCAAAGTCGCAAACTTCATTCCCAA
CCTGTTCGGCGCCCTGGTTGTGGTGCTGCTCGGTTTTGTCGTCGCCAAGCTGCTCGACGCACTGCTCTCCAAATTGCTGG
CCAAGCTGGGCCTTGATCGTCTCGTCGGCGGTACCGGCCTGACCAAGATTATCGGCCGCGCTGGCGTCAAGGTGCCGGTC
TCCACGCTGATCGGCAAGGTCGTCTACTGGTTCGTTCTGCTTATATTTCTCGTATCGGCCGCTGAATCATTGGGCCTGCA
GAGGGTCTCAGCCACGCTGGACATGCTGGCGCTGTATTTGCCCAAGGTATTTGGTGCCGCGCTGGTGCTGCTGGTCGGAG
TGCTGCTGGCGCAACTGGTCAATGGCCTGGTGCGCGGCGCTGCTGAAGGCGTAGGGATCGATTACTCTGCCGGCCTGGGG
CGAATTGCCCAGGGGCTGGTCATCATCATCAGTATTTCGGTTGCCATCAGCCAGCTCGAGGTCAAAACCGACCTGCTGAA
CCACGTTATCGTGATTGCGCTGATTACCGTTGGTCTGACAGTGGCGCTTGCCCTGGGCCTCGGCAGTCGCGAAATTGCCG
GGCAGATCATTGCCGGAATCTACGTCCGTGAACTGTTTCAGGTCGGGCAGCAGGTCCAGATAGGGGATACAGAAGGGCAG
ATCGAGGAAATCGGTACGGTCAAGACAACGCTACTGACAGACGAGGGGGAGCTGGTGTCGTTTTCCAATCGCATCCTGCT
CGAGCAGAGAGTAAGCAGCCGTTAA

Upstream 100 bases:

>100_bases
AGGCGCTTATGATTGCCGTGAACAACGGCTCGGCCCACGTCTCTCCCGTTTCTCGTCGCACCACGAGTGGTGCGCGTTCT
ATCGATAAGGCTGATTGAGC

Downstream 100 bases:

>100_bases
GCGGTTAACCTGCTAATGTATGCCGCCAGGTTGCCGATACAGGCCATGGCGGACATTGACCTGACTGTCGGCAAGATTTG
TTTTGAATAAACCTCAACCG

Product: TM helix protein

Products: NA

Alternate protein names: TM Helix Repeat-Containing Protein; Mechanosensitive Ion Channel Protein; TM Helix Protein

Number of amino acids: Translated: 274; Mature: 274

Protein sequence:

>274_residues
MELNLWTQSLLAAMTALWTKVANFIPNLFGALVVVLLGFVVAKLLDALLSKLLAKLGLDRLVGGTGLTKIIGRAGVKVPV
STLIGKVVYWFVLLIFLVSAAESLGLQRVSATLDMLALYLPKVFGAALVLLVGVLLAQLVNGLVRGAAEGVGIDYSAGLG
RIAQGLVIIISISVAISQLEVKTDLLNHVIVIALITVGLTVALALGLGSREIAGQIIAGIYVRELFQVGQQVQIGDTEGQ
IEEIGTVKTTLLTDEGELVSFSNRILLEQRVSSR

Sequences:

>Translated_274_residues
MELNLWTQSLLAAMTALWTKVANFIPNLFGALVVVLLGFVVAKLLDALLSKLLAKLGLDRLVGGTGLTKIIGRAGVKVPV
STLIGKVVYWFVLLIFLVSAAESLGLQRVSATLDMLALYLPKVFGAALVLLVGVLLAQLVNGLVRGAAEGVGIDYSAGLG
RIAQGLVIIISISVAISQLEVKTDLLNHVIVIALITVGLTVALALGLGSREIAGQIIAGIYVRELFQVGQQVQIGDTEGQ
IEEIGTVKTTLLTDEGELVSFSNRILLEQRVSSR
>Mature_274_residues
MELNLWTQSLLAAMTALWTKVANFIPNLFGALVVVLLGFVVAKLLDALLSKLLAKLGLDRLVGGTGLTKIIGRAGVKVPV
STLIGKVVYWFVLLIFLVSAAESLGLQRVSATLDMLALYLPKVFGAALVLLVGVLLAQLVNGLVRGAAEGVGIDYSAGLG
RIAQGLVIIISISVAISQLEVKTDLLNHVIVIALITVGLTVALALGLGSREIAGQIIAGIYVRELFQVGQQVQIGDTEGQ
IEEIGTVKTTLLTDEGELVSFSNRILLEQRVSSR

Specific function: Unknown

COG id: COG0668

COG function: function code M; Small-conductance mechanosensitive channel

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 28932; Mature: 28932

Theoretical pI: Translated: 8.88; Mature: 8.88

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHHHHHHHEECCCCCHHHHHHHHHHHHHHCCC
>Mature Secondary Structure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HHHHHHHHHHEECCCCCHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA