Definition | Pseudomonas syringae pv. syringae B728a, complete genome. |
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Accession | NC_007005 |
Length | 6,093,698 |
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The map label for this gene is 66045316
Identifier: 66045316
GI number: 66045316
Start: 2421536
End: 2422030
Strand: Direct
Name: 66045316
Synonym: Psyr_2076
Alternate gene names: NA
Gene position: 2421536-2422030 (Clockwise)
Preceding gene: 66045315
Following gene: 66045317
Centisome position: 39.74
GC content: 58.79
Gene sequence:
>495_bases ATGGTTCGTTCGATGCTGTATGCCGCAGACCTCGGTCTGTACGCGCCTTATGTAACGCAGCACGCGCTGGCGCTGGCTCG AACGTTCAACGCCGAGCTGTACGTCATCCATGTCGTCGAGCCTCTGGGCCTGTTCGCCGAGTCGGTGCTGCAGAGTTACC TGGGCGAGGAAGCGTTGAAAGAGCTTCGCGGCAAAGGTGTGAATGCATTTTTGAGTGGAATAGAGCAACGAATGCTCGAC GGGTTTCGTGAAGAGTTGGGCGAAGGGCACTCGGACCTTTCCCTGATTCGTACGGTGCGCGTCGTGCAGGGCGAGCCTGC CAGCGTGATTCTCGAACAGGCGCACAAGCTGGATGTGGATTTGCTTGTGGTCGGCAGTCACAGCCGCAGCATGGAAGAGG GCTCCTCCATAGGCCGGACGGCTGCCAGGGTCCTGCAGTTTTCCGCTGTGCCGGTCTACATGGTTCCGATGATGTTGAAA AAGGTGCGGGGGTAG
Upstream 100 bases:
>100_bases GTGCCGCTTGCCGACGGGGGCTGAGAAGTCCGCCGTCGCAGCCGATGATGCGCTGCTACGCTGAGTCAATCTCCGCCATT CGGGTTGTTCGGGAGGTTGT
Downstream 100 bases:
>100_bases GGGAAAGGTCCAATTGGTGGTTTTAATGAAATCGAGCGTGCGATCACCTTACAAAGGTGATAAAAAGTTCTAGAATTATT CGTCTCACCATTAATCCAGT
Product: hypothetical protein
Products: NA
Alternate protein names: Universal Stress Protein; Universal Stress Family Protein; Universal Stress Protein Family Protein; Universal Stress-Like Protein; UspA Domain Protein; Universal Stress Protein Family; Universal Stress Protein UspA
Number of amino acids: Translated: 164; Mature: 164
Protein sequence:
>164_residues MVRSMLYAADLGLYAPYVTQHALALARTFNAELYVIHVVEPLGLFAESVLQSYLGEEALKELRGKGVNAFLSGIEQRMLD GFREELGEGHSDLSLIRTVRVVQGEPASVILEQAHKLDVDLLVVGSHSRSMEEGSSIGRTAARVLQFSAVPVYMVPMMLK KVRG
Sequences:
>Translated_164_residues MVRSMLYAADLGLYAPYVTQHALALARTFNAELYVIHVVEPLGLFAESVLQSYLGEEALKELRGKGVNAFLSGIEQRMLD GFREELGEGHSDLSLIRTVRVVQGEPASVILEQAHKLDVDLLVVGSHSRSMEEGSSIGRTAARVLQFSAVPVYMVPMMLK KVRG >Mature_164_residues MVRSMLYAADLGLYAPYVTQHALALARTFNAELYVIHVVEPLGLFAESVLQSYLGEEALKELRGKGVNAFLSGIEQRMLD GFREELGEGHSDLSLIRTVRVVQGEPASVILEQAHKLDVDLLVVGSHSRSMEEGSSIGRTAARVLQFSAVPVYMVPMMLK KVRG
Specific function: Unknown
COG id: COG0589
COG function: function code T; Universal stress protein UspA and related nucleotide-binding proteins
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18015; Mature: 18015
Theoretical pI: Translated: 6.36; Mature: 6.36
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.3 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 4.3 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVRSMLYAADLGLYAPYVTQHALALARTFNAELYVIHVVEPLGLFAESVLQSYLGEEALK CCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHH ELRGKGVNAFLSGIEQRMLDGFREELGEGHSDLSLIRTVRVVQGEPASVILEQAHKLDVD HHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHCCEE LLVVGSHSRSMEEGSSIGRTAARVLQFSAVPVYMVPMMLKKVRG EEEECCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCC >Mature Secondary Structure MVRSMLYAADLGLYAPYVTQHALALARTFNAELYVIHVVEPLGLFAESVLQSYLGEEALK CCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHH ELRGKGVNAFLSGIEQRMLDGFREELGEGHSDLSLIRTVRVVQGEPASVILEQAHKLDVD HHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHCCEE LLVVGSHSRSMEEGSSIGRTAARVLQFSAVPVYMVPMMLKKVRG EEEECCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA