Definition | Pseudomonas syringae pv. syringae B728a, complete genome. |
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Accession | NC_007005 |
Length | 6,093,698 |
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The map label for this gene is kdpA [H]
Identifier: 66045287
GI number: 66045287
Start: 2390109
End: 2391803
Strand: Direct
Name: kdpA [H]
Synonym: Psyr_2047
Alternate gene names: 66045287
Gene position: 2390109-2391803 (Clockwise)
Preceding gene: 66045286
Following gene: 66045288
Centisome position: 39.22
GC content: 64.25
Gene sequence:
>1695_bases ATGCACAGTTACGATTATCTGTTGATCCTGGCCTTTCTGGTCCTGCTGCTGGCCCCCGCGCCGTGGCTGGGGCGTTTCTA TTACCGGGTCATGGAAGGCGAGCGCACCTGGCTGAGCCCGTTGCTGGGGCCGGTCGAGCGCGCCTGCTACCGGATCTCCG GCGTCGACCCGAAAACCGAGCAGTCCTGGCAGCAATACGCCTGGGCCTTGCTGGCGTTCAACCTGGCGGGCTTTGTCGTG CTGTTCGCCATCCTCATGCTGCAAGGCGTGCTGCCGCTCAACCCGCAGCAACTGCCGGGCATGGAATGGTCGCTGGCCTT CAACACCACCATGAGCTTTGTCGCCAACACCAACTGGCAGGCCTTCAGCGGCGAAGCGTCGCTCAGCTACCTGAGCCAGA TGGTCGGCCTGACCGTGCAGAACTTCGTCAGCGCCGCGACCGGCCTGGCAGTACTGGTGGCACTGTGTCGCGGCATCAGT CGTCGCTCATCGCAGAGCCTGGGTAACTTCTGGGCCGACATGACCCGCGCCACGCTCTACGGCCTGTTGCCGATCAGTAT CGTGCTGGCGGTGTTTCTGGTCTGGCAGGGCGTGCCACAGAACTTCGGCCACTACATCGACGCGCTGACCCTGCAGGGTG CTGATCAGAGCCTGCCGATGGGCCCTGCGGCCAGTCAGATCTCCATCAAGCAACTGGGCACCAATGGTGGCGGCTTCTTC GGCGTCAACTCGGCGCATCCGTTCGAGAACCCCACGGCCTGGAGCAACCTGTTCGAACTGGTGTCGATCCTGCTGATCCC GGCTGCACTGGTGTTCACCTTCGGCCATTACGTCAAGGACATGCGCCAGAGCCGCGCGATCCTGGGCTGCATGCTGGCAT TGCTGCTGATCGGCGGTGCGGTCTCGCTGTGGGCCGAGTACCAGCCTAACCCGGCGCTGAACATCGCCGGTGTCGAGCAG ACCGCACCGCTGGAAGGCAAGGAAACCCGCTTTGGCACCACCGGCACGGTGCTCTGGTCAGTCGCTACCACTGCGGCGTC CAACGGCTCGGTCAACGGCATGCATGACAGCCTCAACCCGCTGACCGGCATGGTCGCGCTGGTCAACATGATGGTCGGCG AAGTGATCTTCGGCGGCGTCGGTGTCGGCCTCAACGGCATGCTGCTCAACGTGCTTATCGCTGTGTTCCTCGCGGGTCTG ATGATTGGCCGCACCCCGGAATACCTGGGCAAGAAGCTGCAGGCGCAGGAAGTCCGGCTGCTGGTCGCGACCTTGCTGGT GATGCCGGTCGGCGTGCTGGTGCTGGGCGCGATTGCCGCGAGCCTGCCCGGCCCGGCCGGTGCCGTCAGCAACCCCGGCC CGCATGGCTTCAGTCAGTTGCTGTACGCCTACACCTCGGCCACGGCCAACAACGGTTCGGCGTTCGGCGGTTTCAGTGCC AACACCGTGTTCCACAACCTGATGCTCAGCCTGGCGATTTTCATCGGCCGCTTCGGCTACATCCTGCCGGTGCTGGCCCT GGCCGGTAGCCTGGCCATGAAGAAGGCCGCGCCGCAGGGCCAGAACAGCTTCCCGACCCATGGCCTGCTGTTCGTCACCC TGTTGACCGTCACGATTCTGCTGGTGGGTGGCTTGACCTTCCTGCCGACCCTGGCACTGGGGCCGATTGCCGAACACCTG AGCCTGGGTTTCTGA
Upstream 100 bases:
>100_bases CAATGAGCGTTATGGATGGTATCTCTCTGTTGATGGGAGTCGGGCTGTTCATCTATCTGCTGGTGGCGCTGTTGCGCGCC GACCAGAGCCAGGAGTGATC
Downstream 100 bases:
>100_bases GGAACCGATCATGAACTTACCTATTAATCCTGCAAAAAATGCTGCTGCGAAATCTACTGAATCGCAGGCCACCGAGTCGG CAAAAACCGGCATCGCCGCC
Product: potassium-transporting ATPase subunit A
Products: NA
Alternate protein names: ATP phosphohydrolase [potassium-transporting] A chain; Potassium-binding and translocating subunit A; Potassium-translocating ATPase A chain [H]
Number of amino acids: Translated: 564; Mature: 564
Protein sequence:
>564_residues MHSYDYLLILAFLVLLLAPAPWLGRFYYRVMEGERTWLSPLLGPVERACYRISGVDPKTEQSWQQYAWALLAFNLAGFVV LFAILMLQGVLPLNPQQLPGMEWSLAFNTTMSFVANTNWQAFSGEASLSYLSQMVGLTVQNFVSAATGLAVLVALCRGIS RRSSQSLGNFWADMTRATLYGLLPISIVLAVFLVWQGVPQNFGHYIDALTLQGADQSLPMGPAASQISIKQLGTNGGGFF GVNSAHPFENPTAWSNLFELVSILLIPAALVFTFGHYVKDMRQSRAILGCMLALLLIGGAVSLWAEYQPNPALNIAGVEQ TAPLEGKETRFGTTGTVLWSVATTAASNGSVNGMHDSLNPLTGMVALVNMMVGEVIFGGVGVGLNGMLLNVLIAVFLAGL MIGRTPEYLGKKLQAQEVRLLVATLLVMPVGVLVLGAIAASLPGPAGAVSNPGPHGFSQLLYAYTSATANNGSAFGGFSA NTVFHNLMLSLAIFIGRFGYILPVLALAGSLAMKKAAPQGQNSFPTHGLLFVTLLTVTILLVGGLTFLPTLALGPIAEHL SLGF
Sequences:
>Translated_564_residues MHSYDYLLILAFLVLLLAPAPWLGRFYYRVMEGERTWLSPLLGPVERACYRISGVDPKTEQSWQQYAWALLAFNLAGFVV LFAILMLQGVLPLNPQQLPGMEWSLAFNTTMSFVANTNWQAFSGEASLSYLSQMVGLTVQNFVSAATGLAVLVALCRGIS RRSSQSLGNFWADMTRATLYGLLPISIVLAVFLVWQGVPQNFGHYIDALTLQGADQSLPMGPAASQISIKQLGTNGGGFF GVNSAHPFENPTAWSNLFELVSILLIPAALVFTFGHYVKDMRQSRAILGCMLALLLIGGAVSLWAEYQPNPALNIAGVEQ TAPLEGKETRFGTTGTVLWSVATTAASNGSVNGMHDSLNPLTGMVALVNMMVGEVIFGGVGVGLNGMLLNVLIAVFLAGL MIGRTPEYLGKKLQAQEVRLLVATLLVMPVGVLVLGAIAASLPGPAGAVSNPGPHGFSQLLYAYTSATANNGSAFGGFSA NTVFHNLMLSLAIFIGRFGYILPVLALAGSLAMKKAAPQGQNSFPTHGLLFVTLLTVTILLVGGLTFLPTLALGPIAEHL SLGF >Mature_564_residues MHSYDYLLILAFLVLLLAPAPWLGRFYYRVMEGERTWLSPLLGPVERACYRISGVDPKTEQSWQQYAWALLAFNLAGFVV LFAILMLQGVLPLNPQQLPGMEWSLAFNTTMSFVANTNWQAFSGEASLSYLSQMVGLTVQNFVSAATGLAVLVALCRGIS RRSSQSLGNFWADMTRATLYGLLPISIVLAVFLVWQGVPQNFGHYIDALTLQGADQSLPMGPAASQISIKQLGTNGGGFF GVNSAHPFENPTAWSNLFELVSILLIPAALVFTFGHYVKDMRQSRAILGCMLALLLIGGAVSLWAEYQPNPALNIAGVEQ TAPLEGKETRFGTTGTVLWSVATTAASNGSVNGMHDSLNPLTGMVALVNMMVGEVIFGGVGVGLNGMLLNVLIAVFLAGL MIGRTPEYLGKKLQAQEVRLLVATLLVMPVGVLVLGAIAASLPGPAGAVSNPGPHGFSQLLYAYTSATANNGSAFGGFSA NTVFHNLMLSLAIFIGRFGYILPVLALAGSLAMKKAAPQGQNSFPTHGLLFVTLLTVTILLVGGLTFLPTLALGPIAEHL SLGF
Specific function: One of the components of the high-affinity ATP-driven potassium transport (or KDP) system, which catalyzes the hydrolysis of ATP coupled with the exchange of hydrogen and potassium ions [H]
COG id: COG2060
COG function: function code P; K+-transporting ATPase, A chain
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein (Probable) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the kdpA family [H]
Homologues:
Organism=Escherichia coli, GI1786915, Length=563, Percent_Identity=52.5754884547069, Blast_Score=553, Evalue=1e-159,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004623 [H]
Pfam domain/function: PF03814 KdpA [H]
EC number: =3.6.3.12 [H]
Molecular weight: Translated: 59959; Mature: 59959
Theoretical pI: Translated: 7.68; Mature: 7.68
Prosite motif: PS00041 HTH_ARAC_FAMILY_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHSYDYLLILAFLVLLLAPAPWLGRFYYRVMEGERTWLSPLLGPVERACYRISGVDPKTE CCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCHH QSWQQYAWALLAFNLAGFVVLFAILMLQGVLPLNPQQLPGMEWSLAFNTTMSFVANTNWQ HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEHHHHHHHHCCCCCC AFSGEASLSYLSQMVGLTVQNFVSAATGLAVLVALCRGISRRSSQSLGNFWADMTRATLY EECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GLLPISIVLAVFLVWQGVPQNFGHYIDALTLQGADQSLPMGPAASQISIKQLGTNGGGFF HHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCEEHHHCCCCCCCCC GVNSAHPFENPTAWSNLFELVSILLIPAALVFTFGHYVKDMRQSRAILGCMLALLLIGGA CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCH VSLWAEYQPNPALNIAGVEQTAPLEGKETRFGTTGTVLWSVATTAASNGSVNGMHDSLNP HHHHHHCCCCCCEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCHHHHHH LTGMVALVNMMVGEVIFGGVGVGLNGMLLNVLIAVFLAGLMIGRTPEYLGKKLQAQEVRL HHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH LVATLLVMPVGVLVLGAIAASLPGPAGAVSNPGPHGFSQLLYAYTSATANNGSAFGGFSA HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCHH NTVFHNLMLSLAIFIGRFGYILPVLALAGSLAMKKAAPQGQNSFPTHGLLFVTLLTVTIL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHH LVGGLTFLPTLALGPIAEHLSLGF HHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MHSYDYLLILAFLVLLLAPAPWLGRFYYRVMEGERTWLSPLLGPVERACYRISGVDPKTE CCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCHH QSWQQYAWALLAFNLAGFVVLFAILMLQGVLPLNPQQLPGMEWSLAFNTTMSFVANTNWQ HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEHHHHHHHHCCCCCC AFSGEASLSYLSQMVGLTVQNFVSAATGLAVLVALCRGISRRSSQSLGNFWADMTRATLY EECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GLLPISIVLAVFLVWQGVPQNFGHYIDALTLQGADQSLPMGPAASQISIKQLGTNGGGFF HHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCEEHHHCCCCCCCCC GVNSAHPFENPTAWSNLFELVSILLIPAALVFTFGHYVKDMRQSRAILGCMLALLLIGGA CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCH VSLWAEYQPNPALNIAGVEQTAPLEGKETRFGTTGTVLWSVATTAASNGSVNGMHDSLNP HHHHHHCCCCCCEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCHHHHHH LTGMVALVNMMVGEVIFGGVGVGLNGMLLNVLIAVFLAGLMIGRTPEYLGKKLQAQEVRL HHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH LVATLLVMPVGVLVLGAIAASLPGPAGAVSNPGPHGFSQLLYAYTSATANNGSAFGGFSA HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCHH NTVFHNLMLSLAIFIGRFGYILPVLALAGSLAMKKAAPQGQNSFPTHGLLFVTLLTVTIL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHH LVGGLTFLPTLALGPIAEHLSLGF HHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 12928499 [H]