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The map label for this gene is ydiK [H]

Identifier: 66045269

GI number: 66045269

Start: 2353322

End: 2354368

Strand: Direct

Name: ydiK [H]

Synonym: Psyr_2029

Alternate gene names: 66045269

Gene position: 2353322-2354368 (Clockwise)

Preceding gene: 66045268

Following gene: 66045273

Centisome position: 38.62

GC content: 63.23

Gene sequence:

>1047_bases
ATGTTCAACAATGACCGTCTGTTGGTGCAGATTCTGCTGCTGGCGCTGTTTGGTGCCTGCCTCTGGGTGATGGCGCCGTT
CTGGTCGGCGCTGGTCTGGGGCGCGGTACTGGCCTTCGCCAGCTGGCCGCTGATGCGTTTGCTGACCCGCTGGTTCAAGG
GCCGTGAGTCGCTGGCTGCGCTGGTGATGTGCCTGTGCTGGATGCTGCTGGTCGCGGCGCCGCTGGTGTGGCTGGGCTTC
AATCTCGCCGACCATGTGCGTGACGCCACGGGCCTGATCAAGGACATTCAGGTCGACGGCTTGCCCGATCCACCGCAATG
GCTGGCGGGTATTCCGCTGGTGGGCGAAAGACTGGTAGCGCTGTGGACCACCATCGATCAGCAAGGCGCGGCATTCATGG
CGACGCTCAAGCCGCATCTGGGTCAGGTCGGTAACTGGATTCTGGCACGCAGTGCGCAGATCGGCAGCGGGATTCTGGAG
CTGACCCTGAGCATCGTCTTCGCCTTCTTCTTCTACAGGGACGGTCCGCGGCTGGCCGCCTTCGTGCTCAGCCTGCTGGA
ACGCCTGATCGGGGAGCGCGCCCAGTATTATCTGGATCTGGTCGCCGGCACGGTGCAACGCGTAGTCAACGGGGTCATCG
GTACGGCAGCGGCCCAGGCGGTGCTGGCGCTGATCGGCTTCCTGATCGCGGGCATTCCCGGTGCACTGGTGCTGGGGATT
CTGACCTTTCTGTTCAGTCTGATTCCGATGGGCCCGCCCTTGGTCTGGCTGCCTGCCACTGCCTGGCTGGTCTGGCAGGG
CGAGTACGGCATGGCGATATTTCTGGGCATCTGGGGGATGTTCATCATCAGTGGCGTGGACAACGTGCTCAAGCCATATC
TGATCAGCAGGGGCGGCAATCTACCGCTGGTGATTGTCTTGCTGGGTGTGTTCGGAGGCTTGCTGGCCTTTGGCTTCATC
GGCCTGTTCATCGGCCCGACGCTGCTGGCAGTCGCTTACAGCCTGTTGACCGACTGGGTCGGCAGCGAGCGTGCCCGCAG
CCGCTGA

Upstream 100 bases:

>100_bases
CAAGGGGCTCAAGATCGAGGTTATCCGCTAGAACAGCGATGGCGGACTGGCAGGTTCGCCATTATGCTCGCTCTCTCCGA
TCCTTTTTAGTGAATGGCGC

Downstream 100 bases:

>100_bases
CGGCGAAAGTTTCCGCCGCGCCCTGACGCGCGGCGGAGCCTCGCCTTACGCAGCGGTGTCCAGGTACTTGCCGACTGGCT
TGCTGCTCTGGGTGTCATAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 348; Mature: 348

Protein sequence:

>348_residues
MFNNDRLLVQILLLALFGACLWVMAPFWSALVWGAVLAFASWPLMRLLTRWFKGRESLAALVMCLCWMLLVAAPLVWLGF
NLADHVRDATGLIKDIQVDGLPDPPQWLAGIPLVGERLVALWTTIDQQGAAFMATLKPHLGQVGNWILARSAQIGSGILE
LTLSIVFAFFFYRDGPRLAAFVLSLLERLIGERAQYYLDLVAGTVQRVVNGVIGTAAAQAVLALIGFLIAGIPGALVLGI
LTFLFSLIPMGPPLVWLPATAWLVWQGEYGMAIFLGIWGMFIISGVDNVLKPYLISRGGNLPLVIVLLGVFGGLLAFGFI
GLFIGPTLLAVAYSLLTDWVGSERARSR

Sequences:

>Translated_348_residues
MFNNDRLLVQILLLALFGACLWVMAPFWSALVWGAVLAFASWPLMRLLTRWFKGRESLAALVMCLCWMLLVAAPLVWLGF
NLADHVRDATGLIKDIQVDGLPDPPQWLAGIPLVGERLVALWTTIDQQGAAFMATLKPHLGQVGNWILARSAQIGSGILE
LTLSIVFAFFFYRDGPRLAAFVLSLLERLIGERAQYYLDLVAGTVQRVVNGVIGTAAAQAVLALIGFLIAGIPGALVLGI
LTFLFSLIPMGPPLVWLPATAWLVWQGEYGMAIFLGIWGMFIISGVDNVLKPYLISRGGNLPLVIVLLGVFGGLLAFGFI
GLFIGPTLLAVAYSLLTDWVGSERARSR
>Mature_348_residues
MFNNDRLLVQILLLALFGACLWVMAPFWSALVWGAVLAFASWPLMRLLTRWFKGRESLAALVMCLCWMLLVAAPLVWLGF
NLADHVRDATGLIKDIQVDGLPDPPQWLAGIPLVGERLVALWTTIDQQGAAFMATLKPHLGQVGNWILARSAQIGSGILE
LTLSIVFAFFFYRDGPRLAAFVLSLLERLIGERAQYYLDLVAGTVQRVVNGVIGTAAAQAVLALIGFLIAGIPGALVLGI
LTFLFSLIPMGPPLVWLPATAWLVWQGEYGMAIFLGIWGMFIISGVDNVLKPYLISRGGNLPLVIVLLGVFGGLLAFGFI
GLFIGPTLLAVAYSLLTDWVGSERARSR

Specific function: Unknown

COG id: COG0628

COG function: function code R; Predicted permease

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0118 (perM) family [H]

Homologues:

Organism=Escherichia coli, GI1787979, Length=346, Percent_Identity=36.9942196531792, Blast_Score=194, Evalue=5e-51,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002549 [H]

Pfam domain/function: PF01594 UPF0118 [H]

EC number: NA

Molecular weight: Translated: 37847; Mature: 37847

Theoretical pI: Translated: 8.47; Mature: 8.47

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFNNDRLLVQILLLALFGACLWVMAPFWSALVWGAVLAFASWPLMRLLTRWFKGRESLAA
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHCHHHHHH
LVMCLCWMLLVAAPLVWLGFNLADHVRDATGLIKDIQVDGLPDPPQWLAGIPLVGERLVA
HHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCCHHHHCCCCHHHHHHHH
LWTTIDQQGAAFMATLKPHLGQVGNWILARSAQIGSGILELTLSIVFAFFFYRDGPRLAA
HHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHCCCHHHHH
FVLSLLERLIGERAQYYLDLVAGTVQRVVNGVIGTAAAQAVLALIGFLIAGIPGALVLGI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH
LTFLFSLIPMGPPLVWLPATAWLVWQGEYGMAIFLGIWGMFIISGVDNVLKPYLISRGGN
HHHHHHHHCCCCCEEEECCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
LPLVIVLLGVFGGLLAFGFIGLFIGPTLLAVAYSLLTDWVGSERARSR
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCCC
>Mature Secondary Structure
MFNNDRLLVQILLLALFGACLWVMAPFWSALVWGAVLAFASWPLMRLLTRWFKGRESLAA
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHCHHHHHH
LVMCLCWMLLVAAPLVWLGFNLADHVRDATGLIKDIQVDGLPDPPQWLAGIPLVGERLVA
HHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCCHHHHCCCCHHHHHHHH
LWTTIDQQGAAFMATLKPHLGQVGNWILARSAQIGSGILELTLSIVFAFFFYRDGPRLAA
HHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHCCCHHHHH
FVLSLLERLIGERAQYYLDLVAGTVQRVVNGVIGTAAAQAVLALIGFLIAGIPGALVLGI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH
LTFLFSLIPMGPPLVWLPATAWLVWQGEYGMAIFLGIWGMFIISGVDNVLKPYLISRGGN
HHHHHHHHCCCCCEEEECCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
LPLVIVLLGVFGGLLAFGFIGLFIGPTLLAVAYSLLTDWVGSERARSR
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9097039; 9278503 [H]