Definition | Pseudomonas syringae pv. syringae B728a, complete genome. |
---|---|
Accession | NC_007005 |
Length | 6,093,698 |
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The map label for this gene is adk [H]
Identifier: 66044567
GI number: 66044567
Start: 1498072
End: 1498719
Strand: Direct
Name: adk [H]
Synonym: Psyr_1319
Alternate gene names: 66044567
Gene position: 1498072-1498719 (Clockwise)
Preceding gene: 66044566
Following gene: 66044568
Centisome position: 24.58
GC content: 59.1
Gene sequence:
>648_bases ATGCGCGTGATTCTGCTGGGAGCTCCCGGGGCCGGTAAAGGTACTCAGGCAAAATTCATCACTGAAAAGTTCGGCATCCC GCAGGTTTCGACAGGCGACATGCTGCGCGCTGCAGTCAAGGCTGAAACCGAGCTGGGCCTGAAGGCCAAGAGCGTCATGG ACTCAGGCGGTCTGGTTTCCGATGACCTGATCATCGGCCTGATCAAGGACCGTCTGGCCGAGCCGGACTGCGCGAACGGC GTGCTGTTCGATGGCTTCCCGCGCACCATTCCACAGGCCGAAGCCCTGTTGAACGCCGGTCTGGAAATCGACCATGTGCT GGAAATCGCGGTCGATGACGAAGAAATCGTCAAGCGCATGTCCGGCCGCCGGGTTCACGAAGGTTCCGGGCGCATCTACC ACACTATCTTCAATCCGCCGAAGGTCGAAGGTATCGATGATGTGACCGGCGAACCGCTGTTGCAGCGCAAGGACGACGTC GAAGAAACCGTGCGTCATCGCCTGTCCGTGTACCACGCGCAGACCAAGCCGCTGGTCGAGTTTTACAGCAAGCTGGAAGC GAAGAACGGCAAGCCCAAGTGCAGCCATATCCCGGGCGTCGGCTCGGTTGAGGACATCACTGCAAAAGTACTGAAAGCCT TGAGCTGA
Upstream 100 bases:
>100_bases TCTTGATCAGCCTTTCGGCCTATTGGCCTGATTCATTTTTTAGATTGGCCCCCGAGGCGAATCCGATGATTTCACTATAA AAAATTTGAGGAGCATGACG
Downstream 100 bases:
>100_bases GGCTCGCAGGCTGAACAATAAATGGCCCGCTTGCGGGCCATTTGTCATTTATACTGCTGCACTTTTTCACATTGACCACG ACGGAAACACCGATGACCAC
Product: adenylate kinase
Products: NA
Alternate protein names: AK; ATP-AMP transphosphorylase [H]
Number of amino acids: Translated: 215; Mature: 215
Protein sequence:
>215_residues MRVILLGAPGAGKGTQAKFITEKFGIPQVSTGDMLRAAVKAETELGLKAKSVMDSGGLVSDDLIIGLIKDRLAEPDCANG VLFDGFPRTIPQAEALLNAGLEIDHVLEIAVDDEEIVKRMSGRRVHEGSGRIYHTIFNPPKVEGIDDVTGEPLLQRKDDV EETVRHRLSVYHAQTKPLVEFYSKLEAKNGKPKCSHIPGVGSVEDITAKVLKALS
Sequences:
>Translated_215_residues MRVILLGAPGAGKGTQAKFITEKFGIPQVSTGDMLRAAVKAETELGLKAKSVMDSGGLVSDDLIIGLIKDRLAEPDCANG VLFDGFPRTIPQAEALLNAGLEIDHVLEIAVDDEEIVKRMSGRRVHEGSGRIYHTIFNPPKVEGIDDVTGEPLLQRKDDV EETVRHRLSVYHAQTKPLVEFYSKLEAKNGKPKCSHIPGVGSVEDITAKVLKALS >Mature_215_residues MRVILLGAPGAGKGTQAKFITEKFGIPQVSTGDMLRAAVKAETELGLKAKSVMDSGGLVSDDLIIGLIKDRLAEPDCANG VLFDGFPRTIPQAEALLNAGLEIDHVLEIAVDDEEIVKRMSGRRVHEGSGRIYHTIFNPPKVEGIDDVTGEPLLQRKDDV EETVRHRLSVYHAQTKPLVEFYSKLEAKNGKPKCSHIPGVGSVEDITAKVLKALS
Specific function: Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. This small ubiquitous enzyme involved in the energy metabolism and nucleotide synthesis, is essential for maintenance and cell growth [H]
COG id: COG0563
COG function: function code F; Adenylate kinase and related kinases
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the adenylate kinase family [H]
Homologues:
Organism=Homo sapiens, GI7524346, Length=189, Percent_Identity=49.7354497354497, Blast_Score=194, Evalue=5e-50, Organism=Homo sapiens, GI4502013, Length=189, Percent_Identity=49.7354497354497, Blast_Score=194, Evalue=5e-50, Organism=Homo sapiens, GI19923437, Length=188, Percent_Identity=46.8085106382979, Blast_Score=170, Evalue=9e-43, Organism=Homo sapiens, GI310110345, Length=182, Percent_Identity=44.5054945054945, Blast_Score=150, Evalue=1e-36, Organism=Homo sapiens, GI53832003, Length=182, Percent_Identity=44.5054945054945, Blast_Score=150, Evalue=1e-36, Organism=Homo sapiens, GI8051579, Length=182, Percent_Identity=44.5054945054945, Blast_Score=150, Evalue=1e-36, Organism=Homo sapiens, GI53832001, Length=182, Percent_Identity=44.5054945054945, Blast_Score=150, Evalue=1e-36, Organism=Homo sapiens, GI4502011, Length=183, Percent_Identity=30.0546448087432, Blast_Score=94, Evalue=1e-19, Organism=Homo sapiens, GI22749187, Length=190, Percent_Identity=29.4736842105263, Blast_Score=93, Evalue=2e-19, Organism=Homo sapiens, GI21450759, Length=138, Percent_Identity=31.8840579710145, Blast_Score=81, Evalue=6e-16, Organism=Homo sapiens, GI237858799, Length=138, Percent_Identity=31.8840579710145, Blast_Score=81, Evalue=6e-16, Organism=Homo sapiens, GI28144899, Length=222, Percent_Identity=26.1261261261261, Blast_Score=77, Evalue=1e-14, Organism=Homo sapiens, GI28144897, Length=222, Percent_Identity=26.1261261261261, Blast_Score=77, Evalue=1e-14, Organism=Homo sapiens, GI7706497, Length=191, Percent_Identity=26.1780104712042, Blast_Score=69, Evalue=2e-12, Organism=Escherichia coli, GI1786680, Length=214, Percent_Identity=62.1495327102804, Blast_Score=270, Evalue=5e-74, Organism=Caenorhabditis elegans, GI17552384, Length=189, Percent_Identity=47.6190476190476, Blast_Score=177, Evalue=4e-45, Organism=Caenorhabditis elegans, GI17537943, Length=205, Percent_Identity=35.609756097561, Blast_Score=118, Evalue=3e-27, Organism=Caenorhabditis elegans, GI17567503, Length=213, Percent_Identity=30.5164319248826, Blast_Score=94, Evalue=5e-20, Organism=Saccharomyces cerevisiae, GI6320432, Length=189, Percent_Identity=52.9100529100529, Blast_Score=211, Evalue=7e-56, Organism=Saccharomyces cerevisiae, GI6321018, Length=192, Percent_Identity=42.7083333333333, Blast_Score=140, Evalue=2e-34, Organism=Saccharomyces cerevisiae, GI6322828, Length=215, Percent_Identity=24.1860465116279, Blast_Score=69, Evalue=5e-13, Organism=Drosophila melanogaster, GI22026816, Length=186, Percent_Identity=51.6129032258064, Blast_Score=200, Evalue=5e-52, Organism=Drosophila melanogaster, GI17737899, Length=184, Percent_Identity=42.9347826086957, Blast_Score=144, Evalue=5e-35, Organism=Drosophila melanogaster, GI24645822, Length=184, Percent_Identity=42.9347826086957, Blast_Score=144, Evalue=5e-35, Organism=Drosophila melanogaster, GI24663208, Length=213, Percent_Identity=29.5774647887324, Blast_Score=94, Evalue=7e-20, Organism=Drosophila melanogaster, GI17647141, Length=213, Percent_Identity=29.5774647887324, Blast_Score=94, Evalue=8e-20,
Paralogues:
None
Copy number: 1640 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 60 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). 847 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006259 - InterPro: IPR000850 - InterPro: IPR007862 [H]
Pfam domain/function: PF00406 ADK; PF05191 ADK_lid [H]
EC number: =2.7.4.3 [H]
Molecular weight: Translated: 23261; Mature: 23261
Theoretical pI: Translated: 6.25; Mature: 6.25
Prosite motif: PS00113 ADENYLATE_KINASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRVILLGAPGAGKGTQAKFITEKFGIPQVSTGDMLRAAVKAETELGLKAKSVMDSGGLVS CEEEEEECCCCCCCCCHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHCCCCCCC DDLIIGLIKDRLAEPDCANGVLFDGFPRTIPQAEALLNAGLEIDHVLEIAVDDEEIVKRM HHHHHHHHHHHCCCCCCCCCCEECCCCCCCHHHHHHHHCCCCHHHEEEEEECHHHHHHHH SGRRVHEGSGRIYHTIFNPPKVEGIDDVTGEPLLQRKDDVEETVRHRLSVYHAQTKPLVE CCCEEECCCCCEEEEECCCCCCCCCCCCCCCCHHHCCCCHHHHHHHHHHHHHCCCCHHHH FYSKLEAKNGKPKCSHIPGVGSVEDITAKVLKALS HHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHCC >Mature Secondary Structure MRVILLGAPGAGKGTQAKFITEKFGIPQVSTGDMLRAAVKAETELGLKAKSVMDSGGLVS CEEEEEECCCCCCCCCHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHCCCCCCC DDLIIGLIKDRLAEPDCANGVLFDGFPRTIPQAEALLNAGLEIDHVLEIAVDDEEIVKRM HHHHHHHHHHHCCCCCCCCCCEECCCCCCCHHHHHHHHCCCCHHHEEEEEECHHHHHHHH SGRRVHEGSGRIYHTIFNPPKVEGIDDVTGEPLLQRKDDVEETVRHRLSVYHAQTKPLVE CCCEEECCCCCEEEEECCCCCCCCCCCCCCCCHHHCCCCHHHHHHHHHHHHHCCCCHHHH FYSKLEAKNGKPKCSHIPGVGSVEDITAKVLKALS HHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA