Click here to switch to the map view.

The map label for this gene is yneE [H]

Identifier: 66044433

GI number: 66044433

Start: 1335471

End: 1336415

Strand: Reverse

Name: yneE [H]

Synonym: Psyr_1182

Alternate gene names: 66044433

Gene position: 1336415-1335471 (Counterclockwise)

Preceding gene: 66044435

Following gene: 66044432

Centisome position: 21.93

GC content: 57.46

Gene sequence:

>945_bases
ATGTCTGGTCCTTTTGAAAAAAAATGGCGGTGCATCAGCAGAACGGTCACCTACGTTGGCTGGTCATTGTTCTGGCTTCT
GCTCTGGGACGTGGCCGTGACCATGGACTTCATGTTGATCCAGGGTGCGGGGATAGATCTCCCGCTGATGCCGCTTACGC
TGTTGTGCTCGGCGCTTATCGTACTGATCAGCTTTCGCAATTCCAGCGCCTACAACCGCTGGTGGGAAGCGCGCACGCTA
TGGGGCGCGATGGTCAACAGCTCGCGCAGCTATGGCCGCCAGGTACTGACCTTGATTGAAGGCAGCGCCAATGAACGTGG
CAACCCGGTGAAAGAAGTATTGTTCAATCGTCACGTGGCTTACCTGCGGGCACTGCGCGCTCATCTGAAAGGCGATGTCA
GCACAGCAAAACTCGAAGGGCTGTTATCGCATTCCGAGATTCAACGCGCGCGTGAGAGCAATAACTTTCCCAATGACATT
ATCAACGGCTCGGCAGCCATGATCTCCGAAGAGTTTGCCGGAGGGCGAATCGACAGCATCCGCCTGGCGCGACTGGAGTC
GACCATGGTCGAACTGTCCAACTGCCAGGGCGGCATGGAGCGCATCGCCAATACGCCGCTGCCCTACCCGTACGTCTATT
TTCCCAGACTGTTCAGTACCCTGTTCTGCATCATCATGCCGCTGAGCATGGTGACCACCCTGGGCTGGTTCACCCCGGCA
ATCTCGACGGTCGTCGGCTGCATGCTGCTGGCAATGGACCGCATCGGTACTGACCTGCAAGCCCCGTTCGGCGCCAGCCA
GCACCGGATTCGCATGGAAGACCTGTGCAACACCATCGAAAAGAATCTGCGCTCGATGTTTGATGCACCGGCCAGGCAAA
GTCTGGTAATTGACTCGCAAGACCAGCAGGGCAGCGCCTGGCAACCGCATCGACTGGTCGTTTGA

Upstream 100 bases:

>100_bases
GGAGAATTAAGCGAGCTTTAAGCCTCGGTCAGTAAGTTTGCGGCGTGGTGTGTTGATTGACCGCGCCAAACCCCTTCCAA
CCCAGCAAAGGAGTGCCGCA

Downstream 100 bases:

>100_bases
TGCCAGGCACGCTCGTCGCTATTTATAAACGCTGAATATAACTTGCGTGCTGTAGCCGCTGACGTTTAATACAGTGGCAA
GGCGACGTTGCAACCAGCCA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 314; Mature: 313

Protein sequence:

>314_residues
MSGPFEKKWRCISRTVTYVGWSLFWLLLWDVAVTMDFMLIQGAGIDLPLMPLTLLCSALIVLISFRNSSAYNRWWEARTL
WGAMVNSSRSYGRQVLTLIEGSANERGNPVKEVLFNRHVAYLRALRAHLKGDVSTAKLEGLLSHSEIQRARESNNFPNDI
INGSAAMISEEFAGGRIDSIRLARLESTMVELSNCQGGMERIANTPLPYPYVYFPRLFSTLFCIIMPLSMVTTLGWFTPA
ISTVVGCMLLAMDRIGTDLQAPFGASQHRIRMEDLCNTIEKNLRSMFDAPARQSLVIDSQDQQGSAWQPHRLVV

Sequences:

>Translated_314_residues
MSGPFEKKWRCISRTVTYVGWSLFWLLLWDVAVTMDFMLIQGAGIDLPLMPLTLLCSALIVLISFRNSSAYNRWWEARTL
WGAMVNSSRSYGRQVLTLIEGSANERGNPVKEVLFNRHVAYLRALRAHLKGDVSTAKLEGLLSHSEIQRARESNNFPNDI
INGSAAMISEEFAGGRIDSIRLARLESTMVELSNCQGGMERIANTPLPYPYVYFPRLFSTLFCIIMPLSMVTTLGWFTPA
ISTVVGCMLLAMDRIGTDLQAPFGASQHRIRMEDLCNTIEKNLRSMFDAPARQSLVIDSQDQQGSAWQPHRLVV
>Mature_313_residues
SGPFEKKWRCISRTVTYVGWSLFWLLLWDVAVTMDFMLIQGAGIDLPLMPLTLLCSALIVLISFRNSSAYNRWWEARTLW
GAMVNSSRSYGRQVLTLIEGSANERGNPVKEVLFNRHVAYLRALRAHLKGDVSTAKLEGLLSHSEIQRARESNNFPNDII
NGSAAMISEEFAGGRIDSIRLARLESTMVELSNCQGGMERIANTPLPYPYVYFPRLFSTLFCIIMPLSMVTTLGWFTPAI
STVVGCMLLAMDRIGTDLQAPFGASQHRIRMEDLCNTIEKNLRSMFDAPARQSLVIDSQDQQGSAWQPHRLVV

Specific function: Unknown

COG id: COG3781

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0187 family [H]

Homologues:

Organism=Escherichia coli, GI87081925, Length=263, Percent_Identity=30.0380228136882, Blast_Score=132, Evalue=3e-32,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR021134 [H]

Pfam domain/function: PF01062 Bestrophin [H]

EC number: NA

Molecular weight: Translated: 35329; Mature: 35198

Theoretical pI: Translated: 8.37; Mature: 8.37

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
4.5 %Met     (Translated Protein)
6.4 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
4.2 %Met     (Mature Protein)
6.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSGPFEKKWRCISRTVTYVGWSLFWLLLWDVAVTMDFMLIQGAGIDLPLMPLTLLCSALI
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHH
VLISFRNSSAYNRWWEARTLWGAMVNSSRSYGRQVLTLIEGSANERGNPVKEVLFNRHVA
HHHHCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHH
YLRALRAHLKGDVSTAKLEGLLSHSEIQRARESNNFPNDIINGSAAMISEEFAGGRIDSI
HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHCCHHHHHHHHHCCCCCCHH
RLARLESTMVELSNCQGGMERIANTPLPYPYVYFPRLFSTLFCIIMPLSMVTTLGWFTPA
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ISTVVGCMLLAMDRIGTDLQAPFGASQHRIRMEDLCNTIEKNLRSMFDAPARQSLVIDSQ
HHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCC
DQQGSAWQPHRLVV
CCCCCCCCCCCCCC
>Mature Secondary Structure 
SGPFEKKWRCISRTVTYVGWSLFWLLLWDVAVTMDFMLIQGAGIDLPLMPLTLLCSALI
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHH
VLISFRNSSAYNRWWEARTLWGAMVNSSRSYGRQVLTLIEGSANERGNPVKEVLFNRHVA
HHHHCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHH
YLRALRAHLKGDVSTAKLEGLLSHSEIQRARESNNFPNDIINGSAAMISEEFAGGRIDSI
HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHCCHHHHHHHHHCCCCCCHH
RLARLESTMVELSNCQGGMERIANTPLPYPYVYFPRLFSTLFCIIMPLSMVTTLGWFTPA
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ISTVVGCMLLAMDRIGTDLQAPFGASQHRIRMEDLCNTIEKNLRSMFDAPARQSLVIDSQ
HHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCC
DQQGSAWQPHRLVV
CCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]