Click here to switch to the map view.

The map label for this gene is 66044420

Identifier: 66044420

GI number: 66044420

Start: 1322719

End: 1323828

Strand: Reverse

Name: 66044420

Synonym: Psyr_1169

Alternate gene names: NA

Gene position: 1323828-1322719 (Counterclockwise)

Preceding gene: 66044421

Following gene: 66044419

Centisome position: 21.72

GC content: 60.09

Gene sequence:

>1110_bases
ATGTCGAACGTTGATCGTCGCAGTTTCATCAAGTTGGCGGGCATTATCGGCCTGAGCGCAGCGCTGCCTTTCGGTCGCGC
CTATTCAGCCGATGCGCCGCTGGTAGTGGGTTTTATCTACGTCGGCGCTCGCGACGACTTTGGTTACAACCAGGCCCACG
CCCAGGCAGCGGCCATCATCAAGACGCTGCCCAACGTCAAAGTGATCGAGGAAGAAAACGTTCCGGAAACCGTGGCCGTA
CAGAAGACCATGGAAGCCATGATCCGTCAGGACGGCGCCACGTTGATTTTCCCGACCTCGTTCGGCTATTTCGAACCGCA
TGTGGTCAAGGTCGCCAAAAAGTACCCGGAAGTCCGTTTCGCGCACTGCGGCGGTCTCTGGCAGAAAGGTCGCGACCCGA
TGAACGCGGGGAGCTTTTTCGGTTACATCGACGAGGCGCAATACCTCAACGGCGTGATCGCCGGGCACATGAGCAAGAGC
AAAAAGCTCGGTTTTGTCGCCGCCAAACCAGTGCCTCAGGTGCTGCGCAACCTCAACGCCTTCGCCATGGGTGCCCGCTC
GGTCGACCCGAGCATCGTCACCACGGTGATCTTCACCGGTGACTGGTCGCTGCCGGTCAAGGAAGCAGAAGCTGCCAACG
GCCTGATCGATCAGGGTTGTGACGTACTGACCTGCCATGTCGACGGGCCCAAGGTGATCGTCGAGACGGCTGAAAAACGC
GGCGTGATGACCTGTGGCTACCACGCCAGCCAGGCTGCGCTGGCGCCCAAGGGCTACCTGACCGGGGCCGAGTGGAACTG
GGAGACGCCTTATCGTGCTCACGTCGCGGCAGCCCAGAGCGGCGCGCCGATGATCAACTTCCTGCGCGGCGGGCTCAAGG
AAGGCTTCGTCAAAACGTCCGCTTACGGGCCTGCGGTAACAGCCGACGCCAAACAGAAAGCGGATGCCATCAAGGCGCAG
ATGATGGCCGGTCAGTTCGTGATTTTCAAAGGCCCACTCAAGGACAACAAGGGCAACGTGGTGATTGCCGATGGTGTTGC
CCAAGGCCAGACCGACATTGCTCTGGAGAGCATGAATTACCTGGTCGAAGGCGTGCTTGGCCAGCTCTGA

Upstream 100 bases:

>100_bases
GCCTTGAAGGCGCGCTGGACATCACTGACTACAAAGGCTGGCGCGCCTACCGCGCCGCGCAAACACCGTCTTCCATCGCT
CATTGATCAGGGGTAGCAGC

Downstream 100 bases:

>100_bases
GGAACATTCATGAGTTCATCGATAAGTCTGCGCCGCCTGGCCAGCGCGTTGTTGCCGGGGCTGCCTACGCTGCTGGCGGT
GTTTTCCTCGTGCGTGCTGT

Product: twin-arginine translocation pathway signal

Products: NA

Alternate protein names: Bmp Family Protein; Basic Membrane Protein; Lipoprotein; Bmp Family Membrane Protein; ABC Transporter Periplasmic/Surface Lipoprotein; ABC Transporter; ABC Transporter Periplasmic Protein Surface Lipoprotein; Basic Membrane Lipoprotein Family; Twin-Arginine Translocation Pathway Signal; Outer Membrane Lipoprotein; Lipoprotein Periplasmic Protein; Membrane Lipoprotein; Tat Pathway Signal Sequence/Basic Membrane Protein; Basic Membrane Protein Family Protein; Surface Lipoprotein; Basic Membrane Protein A-Like Protein; Signal Peptide Protein; ABC Transporter Periplasmic Protein; Med/BMP Family Lipoprotein

Number of amino acids: Translated: 369; Mature: 368

Protein sequence:

>369_residues
MSNVDRRSFIKLAGIIGLSAALPFGRAYSADAPLVVGFIYVGARDDFGYNQAHAQAAAIIKTLPNVKVIEEENVPETVAV
QKTMEAMIRQDGATLIFPTSFGYFEPHVVKVAKKYPEVRFAHCGGLWQKGRDPMNAGSFFGYIDEAQYLNGVIAGHMSKS
KKLGFVAAKPVPQVLRNLNAFAMGARSVDPSIVTTVIFTGDWSLPVKEAEAANGLIDQGCDVLTCHVDGPKVIVETAEKR
GVMTCGYHASQAALAPKGYLTGAEWNWETPYRAHVAAAQSGAPMINFLRGGLKEGFVKTSAYGPAVTADAKQKADAIKAQ
MMAGQFVIFKGPLKDNKGNVVIADGVAQGQTDIALESMNYLVEGVLGQL

Sequences:

>Translated_369_residues
MSNVDRRSFIKLAGIIGLSAALPFGRAYSADAPLVVGFIYVGARDDFGYNQAHAQAAAIIKTLPNVKVIEEENVPETVAV
QKTMEAMIRQDGATLIFPTSFGYFEPHVVKVAKKYPEVRFAHCGGLWQKGRDPMNAGSFFGYIDEAQYLNGVIAGHMSKS
KKLGFVAAKPVPQVLRNLNAFAMGARSVDPSIVTTVIFTGDWSLPVKEAEAANGLIDQGCDVLTCHVDGPKVIVETAEKR
GVMTCGYHASQAALAPKGYLTGAEWNWETPYRAHVAAAQSGAPMINFLRGGLKEGFVKTSAYGPAVTADAKQKADAIKAQ
MMAGQFVIFKGPLKDNKGNVVIADGVAQGQTDIALESMNYLVEGVLGQL
>Mature_368_residues
SNVDRRSFIKLAGIIGLSAALPFGRAYSADAPLVVGFIYVGARDDFGYNQAHAQAAAIIKTLPNVKVIEEENVPETVAVQ
KTMEAMIRQDGATLIFPTSFGYFEPHVVKVAKKYPEVRFAHCGGLWQKGRDPMNAGSFFGYIDEAQYLNGVIAGHMSKSK
KLGFVAAKPVPQVLRNLNAFAMGARSVDPSIVTTVIFTGDWSLPVKEAEAANGLIDQGCDVLTCHVDGPKVIVETAEKRG
VMTCGYHASQAALAPKGYLTGAEWNWETPYRAHVAAAQSGAPMINFLRGGLKEGFVKTSAYGPAVTADAKQKADAIKAQM
MAGQFVIFKGPLKDNKGNVVIADGVAQGQTDIALESMNYLVEGVLGQL

Specific function: Unknown

COG id: COG1744

COG function: function code R; Uncharacterized ABC-type transport system, periplasmic component/surface lipoprotein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 39461; Mature: 39330

Theoretical pI: Translated: 8.29; Mature: 8.29

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSNVDRRSFIKLAGIIGLSAALPFGRAYSADAPLVVGFIYVGARDDFGYNQAHAQAAAII
CCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEEEECCCCCCCCHHHHHHHHHH
KTLPNVKVIEEENVPETVAVQKTMEAMIRQDGATLIFPTSFGYFEPHVVKVAKKYPEVRF
HHCCCCEEEECCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHCCCEEE
AHCGGLWQKGRDPMNAGSFFGYIDEAQYLNGVIAGHMSKSKKLGFVAAKPVPQVLRNLNA
ECCCCHHHCCCCCCCCCCHHCCCCHHHHHHHHHHHCCCCCCCCCEEECCCHHHHHHCCCH
FAMGARSVDPSIVTTVIFTGDWSLPVKEAEAANGLIDQGCDVLTCHVDGPKVIVETAEKR
HEECCCCCCCCEEEEEEEECCCCCCCHHHHHHCCHHHCCCCEEEEEECCCEEEEEEHHHC
GVMTCGYHASQAALAPKGYLTGAEWNWETPYRAHVAAAQSGAPMINFLRGGLKEGFVKTS
CCEEECCCCCCCCCCCCCCEECCCCCCCCCCHHHHHHCCCCCHHHHHHHHHHHHCCEECC
AYGPAVTADAKQKADAIKAQMMAGQFVIFKGPLKDNKGNVVIADGVAQGQTDIALESMNY
CCCCCEECCHHHHHHHHHHHHHCCEEEEEECCCCCCCCCEEEECCCCCCCHHHHHHHHHH
LVEGVLGQL
HHHHHHHCC
>Mature Secondary Structure 
SNVDRRSFIKLAGIIGLSAALPFGRAYSADAPLVVGFIYVGARDDFGYNQAHAQAAAII
CCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEEEECCCCCCCCHHHHHHHHHH
KTLPNVKVIEEENVPETVAVQKTMEAMIRQDGATLIFPTSFGYFEPHVVKVAKKYPEVRF
HHCCCCEEEECCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHCCCEEE
AHCGGLWQKGRDPMNAGSFFGYIDEAQYLNGVIAGHMSKSKKLGFVAAKPVPQVLRNLNA
ECCCCHHHCCCCCCCCCCHHCCCCHHHHHHHHHHHCCCCCCCCCEEECCCHHHHHHCCCH
FAMGARSVDPSIVTTVIFTGDWSLPVKEAEAANGLIDQGCDVLTCHVDGPKVIVETAEKR
HEECCCCCCCCEEEEEEEECCCCCCCHHHHHHCCHHHCCCCEEEEEECCCEEEEEEHHHC
GVMTCGYHASQAALAPKGYLTGAEWNWETPYRAHVAAAQSGAPMINFLRGGLKEGFVKTS
CCEEECCCCCCCCCCCCCCEECCCCCCCCCCHHHHHHCCCCCHHHHHHHHHHHHCCEECC
AYGPAVTADAKQKADAIKAQMMAGQFVIFKGPLKDNKGNVVIADGVAQGQTDIALESMNY
CCCCCEECCHHHHHHHHHHHHHCCEEEEEECCCCCCCCCEEEECCCCCCCHHHHHHHHHH
LVEGVLGQL
HHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA