Definition | Pseudomonas syringae pv. syringae B728a, complete genome. |
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Accession | NC_007005 |
Length | 6,093,698 |
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The map label for this gene is 66044058
Identifier: 66044058
GI number: 66044058
Start: 908947
End: 910080
Strand: Direct
Name: 66044058
Synonym: Psyr_0803
Alternate gene names: NA
Gene position: 908947-910080 (Clockwise)
Preceding gene: 66044057
Following gene: 66044059
Centisome position: 14.92
GC content: 62.52
Gene sequence:
>1134_bases ATGGACAGCAGCGCAGCTTTTTCCAACCCTACAAAGCTTCGTGCTGATCTGCTTCGTGGTCGCCTCGATGTCAGCGTCGA TTCGTCGACCATCGCTCCGGATTCGCTGTTCGGCTTCGCTGAGCGGCGTAACCCCAAGCGCGCGTTTCTCTTCGTGTCCC GAGTGTTGGGACGCCACATCCCTGCGCGCCCGAGCGTGATGCTGAAAAGTTTTCAGGACCTGGCGCACAAGATCCCCGCA GATCTGCCCGGTCCGGTGCTGGTCATCGGCATGGCCGAAACGGCTGTCGGACTCGGCGCTGGCGTACACCGTGCCTACAG CGCAACGCGCGCGGATGCCTTGTACATGGTCAGCACCCGCCATCCGACCGGCAGCGCACTGTTCGCCCGCTTTGAAGAAG AGCACAGCCATGCCAGCGCTCATCTGATCCACCTGCCCGTTGATCCAACGCTACGCGAGATGATGCTCGGCGCGCGTTCG CTGGTGCTGGTCGATGATGAGGCGTCGACGGGCAAGACCTTCATCAATCTGCATCAGGCGCTGGTCGATGCCGGGTTGAG CAAGCTCGAGCGGGTGGTGACCTGCGTGCTCACTGACTGGTCGGCGGGCGCGGTCAGTACCTCGATGGGCGCAGTGGCAG AGCAGGTCTCGCTGCTGCAAGGCTCGTACTCCTTTGATGAAGACTCAAGCGCGCCGCTGCCGGAGATGCCGGAAGTCGGC ACCGTCGCCATGGGTGACTGGCCGCTGGTCACGGCCAACGACTGGGGGCGCATGGGTGTGCTCTCGGTGGCCGATACGCT GGCACCCGGCATCACCGTCAAAAAGGGCGAACGCATTCTGGTAGTTGGCACCAGTGAATTCGTCTGGCGTCCGTTCCTGC TCGCCGAGCGTCTGGAGAAGGCCGGAGCCGACGTGCATTTCAGTTCCACCAGCCGTTCACCGATTGCACTCGGCCATGCC ATCGACCATGCGCTGTCGTTCTCCGACAACTATGGCCTGGGCATCCCCAATTTCCTCTACAACGTGCGGCCGGGGCAGTT CGACCGGGTGCTGATCTGTACCGAAACGCCAAGGCAGGCCGTGCCTGCCGAGCTGATCGAAGCACTGAACGCCGAGGTCA TCTGCGATGAGTAA
Upstream 100 bases:
>100_bases GTCGTTATGGCTCGTTGAAGCCTCTCGCCAGTGAAGTCGGTGTTGCCTGCCTGATCCGCAGGCGTCAGGGGCTGCGGCCC CGTTAATCAGGAATTTATCG
Downstream 100 bases:
>100_bases CGACCGCCCGCTGATCTTCGTCGATCTGGACGACACGCTGTTCCAGACCGCGCGCAAAACCCCGGCTGGCATTGAAAAGC ACGTCGCAACCCTGGACATC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 377; Mature: 377
Protein sequence:
>377_residues MDSSAAFSNPTKLRADLLRGRLDVSVDSSTIAPDSLFGFAERRNPKRAFLFVSRVLGRHIPARPSVMLKSFQDLAHKIPA DLPGPVLVIGMAETAVGLGAGVHRAYSATRADALYMVSTRHPTGSALFARFEEEHSHASAHLIHLPVDPTLREMMLGARS LVLVDDEASTGKTFINLHQALVDAGLSKLERVVTCVLTDWSAGAVSTSMGAVAEQVSLLQGSYSFDEDSSAPLPEMPEVG TVAMGDWPLVTANDWGRMGVLSVADTLAPGITVKKGERILVVGTSEFVWRPFLLAERLEKAGADVHFSSTSRSPIALGHA IDHALSFSDNYGLGIPNFLYNVRPGQFDRVLICTETPRQAVPAELIEALNAEVICDE
Sequences:
>Translated_377_residues MDSSAAFSNPTKLRADLLRGRLDVSVDSSTIAPDSLFGFAERRNPKRAFLFVSRVLGRHIPARPSVMLKSFQDLAHKIPA DLPGPVLVIGMAETAVGLGAGVHRAYSATRADALYMVSTRHPTGSALFARFEEEHSHASAHLIHLPVDPTLREMMLGARS LVLVDDEASTGKTFINLHQALVDAGLSKLERVVTCVLTDWSAGAVSTSMGAVAEQVSLLQGSYSFDEDSSAPLPEMPEVG TVAMGDWPLVTANDWGRMGVLSVADTLAPGITVKKGERILVVGTSEFVWRPFLLAERLEKAGADVHFSSTSRSPIALGHA IDHALSFSDNYGLGIPNFLYNVRPGQFDRVLICTETPRQAVPAELIEALNAEVICDE >Mature_377_residues MDSSAAFSNPTKLRADLLRGRLDVSVDSSTIAPDSLFGFAERRNPKRAFLFVSRVLGRHIPARPSVMLKSFQDLAHKIPA DLPGPVLVIGMAETAVGLGAGVHRAYSATRADALYMVSTRHPTGSALFARFEEEHSHASAHLIHLPVDPTLREMMLGARS LVLVDDEASTGKTFINLHQALVDAGLSKLERVVTCVLTDWSAGAVSTSMGAVAEQVSLLQGSYSFDEDSSAPLPEMPEVG TVAMGDWPLVTANDWGRMGVLSVADTLAPGITVKKGERILVVGTSEFVWRPFLLAERLEKAGADVHFSSTSRSPIALGHA IDHALSFSDNYGLGIPNFLYNVRPGQFDRVLICTETPRQAVPAELIEALNAEVICDE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 40567; Mature: 40567
Theoretical pI: Translated: 5.74; Mature: 5.74
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDSSAAFSNPTKLRADLLRGRLDVSVDSSTIAPDSLFGFAERRNPKRAFLFVSRVLGRHI CCCCCCCCCCHHHHHHHHHCCEEEEECCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHCCC PARPSVMLKSFQDLAHKIPADLPGPVLVIGMAETAVGLGAGVHRAYSATRADALYMVSTR CCCHHHHHHHHHHHHHHCCCCCCCCEEEEEEHHHHHHHCHHHHHHHHHHCCCEEEEEEEC HPTGSALFARFEEEHSHASAHLIHLPVDPTLREMMLGARSLVLVDDEASTGKTFINLHQA CCCCHHHHHHHHHHCCCCCEEEEEECCCHHHHHHHHCCCEEEEEECCCCCCHHHHHHHHH LVDAGLSKLERVVTCVLTDWSAGAVSTSMGAVAEQVSLLQGSYSFDEDSSAPLPEMPEVG HHHHHHHHHHHHHHHHEECCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC TVAMGDWPLVTANDWGRMGVLSVADTLAPGITVKKGERILVVGTSEFVWRPFLLAERLEK EEEECCCCEEECCCCCCCHHHHHHHHHCCCCEEECCCEEEEEECCHHHHHHHHHHHHHHH AGADVHFSSTSRSPIALGHAIDHALSFSDNYGLGIPNFLYNVRPGQFDRVLICTETPRQA CCCCEEECCCCCCCEEHHHHHHHHHCCCCCCCCCCCHHHEECCCCCCCEEEEEECCCCCC VPAELIEALNAEVICDE CHHHHHHHCCCCEEECC >Mature Secondary Structure MDSSAAFSNPTKLRADLLRGRLDVSVDSSTIAPDSLFGFAERRNPKRAFLFVSRVLGRHI CCCCCCCCCCHHHHHHHHHCCEEEEECCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHCCC PARPSVMLKSFQDLAHKIPADLPGPVLVIGMAETAVGLGAGVHRAYSATRADALYMVSTR CCCHHHHHHHHHHHHHHCCCCCCCCEEEEEEHHHHHHHCHHHHHHHHHHCCCEEEEEEEC HPTGSALFARFEEEHSHASAHLIHLPVDPTLREMMLGARSLVLVDDEASTGKTFINLHQA CCCCHHHHHHHHHHCCCCCEEEEEECCCHHHHHHHHCCCEEEEEECCCCCCHHHHHHHHH LVDAGLSKLERVVTCVLTDWSAGAVSTSMGAVAEQVSLLQGSYSFDEDSSAPLPEMPEVG HHHHHHHHHHHHHHHHEECCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC TVAMGDWPLVTANDWGRMGVLSVADTLAPGITVKKGERILVVGTSEFVWRPFLLAERLEK EEEECCCCEEECCCCCCCHHHHHHHHHCCCCEEECCCEEEEEECCHHHHHHHHHHHHHHH AGADVHFSSTSRSPIALGHAIDHALSFSDNYGLGIPNFLYNVRPGQFDRVLICTETPRQA CCCCEEECCCCCCCEEHHHHHHHHHCCCCCCCCCCCHHHEECCCCCCCEEEEEECCCCCC VPAELIEALNAEVICDE CHHHHHHHCCCCEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA